Gasterosteus aculeatus (three-spined stickleback): 120829081
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Entry
120829081 CDS
T07457
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120829081 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120829081 (l1cama)
04090 CD molecules [BR:
gat04090
]
120829081 (l1cama)
04091 Lectins [BR:
gat04091
]
120829081 (l1cama)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
L1 family
120829081 (l1cama)
CD molecules [BR:
gat04090
]
Proteins
120829081 (l1cama)
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120829081 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Bravo_FIGEY
Pur_ac_phosph_N
C2-set_2
Ig_DSCAM-DSCAML_C
Ig_5
Ig_4
V-set_CD47
C2-set_3
Ig_VEGFR-1-like_5th
Ig_C17orf99
SusE
DUF4998
DUF7030
Motif
Other DBs
NCBI-GeneID:
120829081
NCBI-ProteinID:
XP_040048825
UniProt:
A0AAQ4QVB6
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All DBs
Position
XII:complement(9973226..10007979)
Genome browser
AA seq
1277 aa
AA seq
DB search
MPHMQQQQVGSRGRCSLPLLLLLLLLSFAARPSQAAIHIPSNYQISDLKRPPMIITQPES
VTVFSIEDFVMSCEAAGNPLPIFRWTKDGGEFDPGTDPELKVLERPGSFAFFSLGNNMDS
LKQYQAKYVCFASNELGTAVSNEAKLNTDVLPSQQKEKKGNEKSEEGNSIILKCNPPQSS
MEPNIHWMDWRLHHIQLSERVVVGKDGNLYFAHLTPEDSRNDYTCNVQYLATRTILAKEP
ITLSVIPSNSVLRNRRPHMMRPTGSHSTYHFLRGQTVELECIVQGLPTPKVSWVRRDGEM
SESRVVKEMFNRRLRFSNISESDGGEYQCLAENSQGKATHTYTVNVEAAPYWIKEPPSQL
YAPGETVKLHCHADGIPSPTISWTINGIPLSATDKDSRRSLTTSGALILKDVDLGDTAIY
QCQASNKHGTIITNTNVYVIELPPQILTEDGITNTFTEGQKAVLECETFGSPKPEVTWES
GSTTSLLADTRVNQLINGVLEISNVTHDDEGFYTCSVENTNLSVSTELEVLNRTVILSPP
QDLKVQRGNTTIFTCRSLVDRKLGSPLIQWRKNNQKIAESHADGKYTIDGPDLKIANVET
DDEGVYTCQVITKYDMAEASGSLTLWDRPDPPVLLQITNPKHRAVTLSWTPGDDHNSAVL
EYVVEFEDQGWNERGWEELTRVAGNKKRAVLPLWPYMSYRFRVIAINYVGKSVPSKPSEI
HNTPADAPDNNPEDVRSESKAPETLFITWEEMDRRDFNGPDFKYLVLWRRVVGSGPKWNT
NYTKAPPFTVYDIGNFSAFEIKVQAVNEKGEGPEADPVIGYSGEDVPLEAPMNVVVTLMN
STTIIVSWAAVDKETVRGHLLGYKVYLTRTGTRSHHRGRRSREPESTQVLETGANEEQKL
ISNLRPYSHYALVATVFNSKGEGPPCETLSFKTDEGVPGHPTSLMLDSPSETEMTLHWAP
PAEPNGVLVGYLLQYQQIVESDDSPMQVETIDGTAVTHLTMRGLDPHSHYRFFLRGRTAA
GDGEPIMREGATTLDGAPPANIELSPGENFVNLSWVAKKRHRNVGFQIYYLKKNEVVEKT
AKVNSSQSFYQLQGLTPGSNYHLRFTYSNSTFLEKDIKTDGTGVTEMQPSFATQGWFIGV
VSAVVLLLLILLILCFIKRSKGGKYSVKDKEEGPMDSEARPMKDETFGEYRSLESDLEGK
RTASQPSLGEDSKLCSEDNLDFNGSSAVTTELNMDESLVSQFSRPSEGPEAPDNSPLGPT
AVSSATNGVPNSVAILD
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacatgcagcaacagcaggttggcagtagggggcggtgctcccttcccctcctc
cttctcctcctcctcctctcctttgctgcccggcccagccaagcagccatacacataccc
tccaactaccaaataagtgatctcaagaggcctccaatgatcatcacacagccggagtct
gtcaccgtcttcagcattgaagacttcgtcatgagctgtgaagccgctggcaacccttta
cccattttccgatggacaaaggatggaggggagtttgacccgggcactgaccccgaactg
aaggttttggagcgccccggctcatttgcgttcttctcgctcggtaacaacatggacagc
ttgaagcagtaccaggccaaatacgtgtgcttcgcatccaacgaactggggacagccgtc
tctaacgaggccaaactcaacaccgacgttctcccctcccagcagaaagaaaagaagggt
aatgagaagtctgaagagggaaacagtattattctcaagtgtaaccctccgcagagctcg
atggagcccaacattcactggatggactggagactacaccatatccagctcagtgagcga
gtggtcgtggggaaggatggcaacctttactttgctcatttgacacccgaggacagcagg
aacgactacacgtgcaatgtccaatacctggcgacacgcaccattctggcaaaggaaccc
atcactctgagtgtaatcccatccaactctgtactgcggaaccggaggccccacatgatg
agacctactggaagccacagcacttaccatttcctcaggggccagaccgtggagctcgag
tgcatcgtccaaggccttccaactcccaaagtttcatgggtgaggagagacggcgagatg
tctgagtctcgggtggtcaaagagatgttcaatcgccgcctgcgcttcagtaacatctca
gaaagcgacggcggcgagtaccagtgtttggctgagaactcccaagggaaggccacacac
acttacactgtcaatgtggaagcggctccctattggatcaaagagccacccagtcagtta
tacgccccaggtgagactgtcaagctacactgccacgctgacggcatccccagtcctacc
atcagttggaccatcaacgggatccccctctcagcaaccgacaaggactccagacgttct
ctgacaacgagcggggctctaatactaaaggatgtcgacctgggagacactgccatctat
cagtgccaggcctccaacaagcatgggaccatcatcaccaacaccaacgtctatgtcatt
gagctgcctccccagatcctgactgaggatgggattacaaacacgtttacagagggccag
aaagctgtattggagtgtgagacctttggctctcctaaacctgaagtcacatgggagagc
ggcagcaccacctcccttctggcagataccagagtgaatcagctcatcaacggggtgctg
gagatctccaatgtcacccatgacgatgagggcttctacacgtgctcagtagagaacacc
aacttgtctgtcagcaccgagctggaagtcctcaacaggacagtgatcctgtcgcctcca
caggatctgaaggtgcagcgtggaaacacgacaatcttcacttgtcggtccctggttgac
cgcaaacttggctctccgctcattcagtggagaaaaaacaatcaaaagatcgctgagtcc
cacgctgacggaaagtacacaattgatggaccagacctgaaaatagctaacgtggaaaca
gatgatgagggcgtgtacacctgtcaggtcattactaagtacgacatggctgaagccagt
ggctctctcactttatgggaccgtccagaccctccggtcctcctccagatcactaacccc
aaacatcgtgcagtcacccttagctggactcccggagacgaccacaacagcgctgtgcta
gagtatgtggttgagtttgaggaccagggttggaatgagaggggatgggaagagctgacg
agagtagcaggaaacaagaagcgtgctgtcctccctctgtggccttacatgtcttaccgt
ttccgggtcattgccatcaattatgtggggaagagcgtccccagcaagccatccgaaatc
cacaatacacctgctgatgctccggacaataaccctgaagatgtgcggagcgagtccaaa
gcgccagagaccctgttcatcacctgggaggaaatggaccgacgtgacttcaatggacct
gactttaagtatttagtcctgtggaggcgagttgtgggcagcggacccaagtggaacacc
aactacacgaaagcaccgccgttcacggtctatgacattggtaacttttctgcctttgag
atcaaagttcaggctgtcaacgagaaaggggagggacccgaggcagaccccgtcatcggt
tactcaggagaagatgttccattggaggctccaatgaatgtggttgttaccttaatgaac
agcacaaccatcatagtgagctgggcagctgtggacaaagagacggtcagaggacacctg
ctgggatacaaggtctacttgaccagaaccggcaccaggagccaccacaggggccgaagg
tccagggagccagagagcactcaggtgttggagacaggggcaaacgaggagcagaagttg
atcagtaacctcagaccatactcccactatgccctggtcgccaccgtgttcaacagcaag
ggagagggaccgccgtgtgagactttgtcctttaagactgacgaaggagttcctggtcat
cccacgtccctgatgctggacagcccgtcagagacagaaatgaccctccactgggcgcca
cctgccgagcccaatggagtcctcgttggatatctgctgcagtaccagcagattgtggag
agtgacgacagccccatgcaggtagagacaatagacggcaccgcggtcacccacctcacc
atgagaggcctggacccccacagccactaccgcttcttcctgagggggcgcactgccgcg
ggggatggagagcctatcatgagggagggggccaccacgctggacggagcgcctcctgcc
aatatcgaactgtcccccggcgaaaactttgttaacctcagctgggtggccaagaagaga
cacaggaacgtgggcttccagatatactacctcaagaaaaatgaggtcgtggagaagaca
gcaaaggtgaactcctcccagtccttctaccagctccagggcctgactcctggctctaat
tatcatctacgcttcacctacagcaacagcactttcttggagaaggatatcaagacagac
ggaaccggagtaacagagatgcagcccagttttgcaacgcaaggctggttcatcggtgtt
gtgagtgccgtcgtgctgctgctgctgatactgcttatcctctgcttcatcaagaggagt
aaaggggggaagtattcagtgaaagataaagaggagggtccgatggactcagaagcacgg
ccgatgaaggatgagacttttggagagtatagatccctcgaaagcgacctcgaggggaag
cgcacggccagccagccgtccctgggtgaggacagcaagctgtgcagcgaggacaacctg
gacttcaacggcagcagcgccgtgaccaccgagctcaacatggacgagtctctggtcagc
cagttcagtcggcccagcgagggtccagaggcgccagacaactccccgctcggccccacc
gccgtctcctcggccaccaacggcgtgcccaactcagtcgccatactcgattaa
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