Gasterosteus aculeatus (three-spined stickleback): 120829082
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Entry
120829082 CDS
T07457
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04110
Cell cycle
gat04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120829082 (smc1a)
04114 Oocyte meiosis
120829082 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120829082 (smc1a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120829082 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
120829082 (smc1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
120829082
NCBI-ProteinID:
XP_040048829
LinkDB
All DBs
Position
XII:complement(9958442..9968672)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRAIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGDLAQEYERRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKRMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMKAVELSKQDFEERMEEEAQS
QGQDLTLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREMEITDLRDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQTE
ESSSQRTSSTVLAKEALIEIDYSNLSEDLKDALSEEEIKGETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVLNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagattgagaacttcaagtcgtacaaaggaagacagatc
attgggccttttcacaagtttactgcaatcatcggacccaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagagaagacaagcaatctgcgtgtgaagacg
ctcaaggatctcatccatggagcacctgtcggaaagccagcggccaacagagcttttgtc
agcatggtgtaccaggaagataacggagaggaacgctccttcacaagggccatcatcggt
tcctcctctgaataccgtatcaacaacaaggtggtgggcctgcctgaatacagcgaagag
ttggaaaaacttggcatcctcatcaaggctaggaacttcctggtctttcagggagctgtg
gagtctattgccatgaagaaccctaaggagcgtacagctctgtttgaggaaatctcacga
tctggagatctggctcaggagtacgaacgcaggaagaaggaaatggtgaaagcagaagaa
gacacgcagttcaattaccatcgaaagaaaaacattgctgctgagcgcaaagaagccaag
caagagaaagaggaggctgagcgttaccagcgtctgaaagatgaagtggccagggccagt
gttcaactgcaacttttcaagttataccacaacgagacggagattgagaagctaaacaaa
gagctgggccagagaaacaaggagattgataaagaccgtaaacggatggaccatgtggag
gaggagttgaaggacaagaagaaggagctgggccgactgatgagggaacagcagaccatt
gaaaaggaaatcaaggagaaagactcagagttgaatcagaagaggccgcagtacatcaag
gccaaagaaaacacttctcacaagatcaagaagctcgaggcagctcgcaaatcattgcaa
aatgcccagaaaatgtacaagaaacgcaagggggacatggatgagctggataaagaaatg
aaggcagtggagctgtccaagcaagactttgaggagcggatggaggaggaggcacagagc
cagggccaggatctcaccctcgaagaaaaccaggtcaaagcataccatcgcctgaaggag
gaggctagtaaacgggctgccaccctggctcaggagctggagaagttcaaccgcgaccag
aaggccgaccaggaccgcctcgacttagaggagaggaagaaagtggagacggaggcaaaa
atcaaacagaaaatacgtgaaattgaagaaaaccagaaacgtattgagaaattagaagat
tacatcaccaccagcaggcagtcactggatgagcagaagcgcatggaggaggagctgacg
gaggaggtggagatggcaaagaggaggattgatgagatcaacacggagcttaaccaggta
atggagcagctgggagacgccaggatcgacaggcaggagaacagtcgccagcagcgcaag
gctgagatcatggagagcattaaaagactctaccccggctctgtgtatggtcgtctgatc
gacctgtgccagcccactcagaaaaagtatcagatcgctgtgaccaaagtgttgggcaag
aacatggacgccatcattgtggactcggagaagacgggcagagattgtattcaatacatc
aaggagcagagaggagagcccgaaaccttccttcctcttgactacctcgaggtaaaacca
acggatgagaaactaagggaactgcgaggagccaaactggtgattgatgtgattcgctat
gagcctccccacatcaagaaagccctccagtatgcttgtggcaacgcgctggtctgtgag
aacgtggaggatgcgcggaggatcgccttcggagggccatacagacacaagacggtagcc
ctcgatggtaccttgttccagaagtctggagtcatctctggaggagccagcgacctgaag
gccaaggccaggcgctgggacgagaaggcggtggacaagctcaaggagaagaaggagaaa
ctcactgaagagctcaaagagcaaatgaaggccaagaggaaggaggccgagctgcgtcag
gtgcagtctcaggcccacggcttgcagatgagactcaagtactcacagagtgatctggaa
cagacaaaaacccgccacctctccctcaacatgcaggagaagtccaagctcgagagcgag
ttggcaaactttggccctcgcatcaacgacatcaagaggatcatccagtcacgcgagatg
gagatcactgacctgcgagaccgcatgaacctggtggaggacgaggtgtttattgaattc
tgtaaagagattggagtgaggaacatcagagagtttgaagaggagaaggtgaagaggcag
aacgagattgcaaagaagcgtctcgagtttgagacccagaagacccgcctgggaatccag
gtagactacgagaagaatcagctgaaggaggaccaagagaaagttatgatgtgggagcag
accgtcaagaaggacgaggctgaaatagaacgactgaagaaagaggaacaccggcacatg
aagatcattgatgagacaatggcacagctgcaggacctcaagaaccagcacctcaccaag
aaatctgaagtcaacgataagaaccacgacatggaggagatccgcaaaaaactgggtggc
gccaataaggagttgactcatctccagaaggaagtgacggccattgagaccaaactggag
cagaagcgcagtgaccgtcacaacttgcttcaagcctgcaaaatgcaggacatcaggttg
cctcttcgttccggaacgatggatgacatcagccaaggagagggcagctcccagacagag
gagtccagcagccagaggacatccagcactgtcctcgctaaagaggccctcatagagatc
gactacagcaacctgtctgaagacctcaaggacgcactgtcagaggaggagatcaagggg
gagacaaacacactgcagcagcgtctgaacgagcagcaaagcatccttcagaggatcagt
gcgcccaacatgaaggccatggagaagctggagagtgtcagggacaagttccaagagacc
agtgacgagtttgaggctgcgcgtaagagagccaagaaggccaagcaagcctttgagcag
atcaagaaggagcggtttgatcgcttcaataactgctttgagtctgtggccactaacatc
gatgagatctacaaggccctctcacgcaacagcagtgcccaggcttttctaggcccagaa
aaccccgaggagccgtacctggatggcatcaactataactgtgtggctccaggaaagcgg
ttcagacccatggacaacctgtctggaggagagaagaccgttgctgccctggctcttctc
tttgctattcacagctacaaaccggctcccttctttgtcctggatgagatcgatgctgct
ttggacaacactaacatcggcaaggtggccaactacatcaaagaccagtcggtgctgaac
ttccaggccatcgtgatttccctgaaagaggaattctacaccaaggctgactcactcatc
ggtgtttatccagagcaaggagattgcgtcatcagtaaagtgctaacctttgacctctcc
cagtatcccgacgccaacccaaacccgaatgaataa
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