Gasterosteus aculeatus (three-spined stickleback): 120829150
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Entry
120829150 CDS
T07457
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120829150
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120829150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
AFG1_ATPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
120829150
NCBI-ProteinID:
XP_040048952
LinkDB
All DBs
Position
XII:complement(60426..70070)
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AA seq
1165 aa
AA seq
DB search
MSPPLLFKDVRPSVDARSHQQRGKSPEPRCLSIKSDQSMGHPLVFKDDQSMGHPLFFKDD
QSMGHPLVFKDDQSMGHPLVFKDDQSMGHPLVFKDDQSMGHPLAFKDDQSMGHPLVFKDD
QSMGHPLAFKDGRRSYDTEEDQESSDVPTGPSAQQHQTHMDSIFMLLEKNILTFVKNELK
KIQKVVSSDYPECVEKEDEEVLDEEQRRSREAFVKISVYFLRRMKQEGLAEHLQSRLLAA
VCQRKLKSNLKKKFQCVFEGIAKAGNPTLLNEIYTELYITEGGSAEVNQEHEVRQIETAS
RRPARPETTIRLEDLLKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKDHQDIR
FTFPFTFRELNVLREKKFSLVRLIHHFFSETRAAGICRFEEFQVVFIFDGLDECRLPLDF
HKNEILTDITELASVDVLLTNLIRGKLLPSARLWITTRPAASNQIPAECVDMVTEVRGFN
DPQKEEYFMKRFRDEEQAISIISHIKTSRSLHIMCHIPVFCWITAGVLEELKTKDRGELP
KTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKGNLIFYE
SDLTECGIDIRAASVYSGVFTQIFREESGLYQDKVFCFVHLSVQEFLAALHVHLTTFSSG
VNLLSEEQTTSLESKRFKVNPEPTCLYQSAVDKALKSPNGHLDLFLRFLLGLSLETNQTL
LRGLLTQTGSYSETNQETVEYIKEKISKNVSPEKSINLFHCLNELNDGSLVEDIQWFLSS
GRLATGELSPAHWSALVFILLSSEEDLEVFDLKKYSASEEALLRLLPAVKASNKVLLSGC
LITEEGCASLASALTSDPSHLRELDLSYNHPGDSGVKLLSVGLEDPHCKLETLRLSGCNL
SERSCDALSSVLSSQSSRLRELDLSNNHLQDLGVKLLSAGLESPHCHLETLRVEPDGVRW
LRPGLRKYSCELTIDTNTVNKQLKLSDNNREVTHVVEVQSRPDHPDRFDSCLQLLCRTGL
TGRCYWEVEWSGDVDLSVGYRGIRRKGYSYDCVFGLNDQSWSLMFSDDKGYSVRHNKTET
FITSSSSSSGRVAVYVDCPAGSLSFFRVSSDTLIHLHTFSATFTEPLYPGFGFRSWPGSG
ASVSLCPLQEGESPPGGEPSSLLTT
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctcctctactcttcaaagatgttcgtccctctgttgatgcaaggtcacatcag
cagagaggaaagtctcctgaacccagatgtttgtccataaagagtgatcagtcaatgggt
catcctctggtcttcaaagatgatcagtcaatgggtcatcctctattcttcaaagatgat
cagtctatgggtcatcctctggtcttcaaagatgatcagtcaatgggtcatcctctggtc
ttcaaagatgatcagtctatgggtcatcctctggtcttcaaagatgatcagtctatgggt
catcctctagccttcaaagatgatcagtctatgggtcatcctctggtcttcaaagatgat
cagtctatgggtcatcctctagccttcaaagatggacggcgttcttatgacacagaagag
gaccaggagagctcagatgttcccacaggtccatctgcccagcagcatcaaacacacatg
gactccatcttcatgctgctggagaagaacatcctcacttttgtgaagaacgagctgaag
aagatccagaaggttgtgagttcagattacccagaatgcgtagagaaagaggatgaggag
gtgctggatgaagagcagaggaggagcagagaggcatttgtgaagatctcagtttacttc
ctgaggagaatgaagcaggaagggctggctgagcatctgcagagcagacttcttgctgca
gtttgtcagcgtaaactcaaatccaacctgaagaagaagttccagtgtgtgtttgagggg
atcgctaaagcaggaaacccaacccttctgaatgagatctacacggagctctacatcaca
gagggagggagtgcagaggtcaatcaagaacatgaggtcagacagattgaaacagcatcc
agaagaccagccagaccagaaacaaccatcagactagaagacctcctcaaagcctcagct
ggaggagaggaaccaatcagaaccgtgatgactaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaagaccaccaggacatacgg
ttcacatttccattcaccttcagagagctgaatgtgctgagagagaagaagttcagtttg
gtgagacttattcatcacttcttcagtgaaaccagagcagcaggaatctgcaggtttgaa
gagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctttggacttc
cacaagaacgagatcctgactgacatcacagagttggcctcagtggatgtgctcctcaca
aacctcatcagggggaagctgcttccctctgctcgcctctggatcaccacacgacctgca
gcatccaatcagatccctgctgagtgtgttgacatggtgacagaggtaagagggttcaat
gacccccagaaggaggagtacttcatgaaaaggttcagagatgaggagcaggccatcagc
atcatctctcatatcaagacctcacgaagcctccacatcatgtgccacatcccagtcttc
tgctggatcactgctggagttctggaggagttgaagaccaaagatagaggagagctgccc
aagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaaggtc
aagtacgatggaggagctgagacggatcctcactggagtccagagagcaggaagatgatt
gagtctctgggaaaactggcctttgatcagctgcagaaaggcaacctgatcttctatgaa
tccgacctgacagagtgtggcatcgatatcagagcagcctcggtgtactcaggagtgttc
actcagatcttcagagaggagagcggactgtaccaggacaaggtcttctgcttcgtccat
ctgagtgttcaggagtttctggctgctcttcatgtccatctgacgaccttcagctctggt
gtcaatctgctgtcagaagaacaaacaacctccctggagtctaaacgctttaaagtcaat
cccgaaccaacgtgtctctaccagagtgctgtggacaaggccttaaagagtcctaatgga
cacctggacttgttcctccgcttcctcctgggtctttccctggagaccaatcagactctc
ctacgaggtctgctgacacagacaggaagttactcagagaccaatcaggagacagttgag
tacatcaaagagaagatcagtaagaatgtgtctccagagaaaagcatcaatctgttccac
tgtctgaatgaactgaatgatggttctttagtggaggacatccaatggttccttagttca
ggacgtctcgctacaggagaactgtctcctgctcactggtcagctctggtcttcatctta
ctgtcatcagaagaggatctggaggtgtttgacctgaagaagtactctgcttcagaggag
gctcttctgaggctgctgccagcggtcaaagcctccaacaaagttctgctgtcaggctgt
ctgatcacagaggaaggctgtgcttctctggcctcagctctgacttctgacccctcccat
ctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtct
gttggactggaggatcctcactgtaaactggagactctcaggctgagtggctgtaacctc
tcagagagaagctgtgacgctctgtcctcagttctcagctcacagtcctctaggctgaga
gagctggatctgagtaacaaccacctgcaggatttaggagtgaagctgctgtctgctgga
ctggagagtccacactgtcacctggagactctcagggtggagcctgatggagtccgatgg
ttgagaccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagtaaac
aaacaactcaaactgtctgacaacaacagggaggtgactcatgtggtggaggtccagtca
cgtcctgatcatccagacagatttgactcctgtcttcagctgctgtgtagaactggtctg
actggtcgctgttactgggaggtcgagtggagcggagacgttgatttatcagtgggttac
agaggaatccggaggaaaggatacagttatgactgtgtgttcgggttgaatgatcagtcc
tggagtctgatgttctctgatgataaaggttactctgtccgtcacaataagacggaaaca
ttcatcacctcctcctcctcctcctctggtagagtagcagtgtatgtggactgtcctgct
ggctctctgtctttcttcagggtctcctctgacacactgatccacctccacaccttcagc
gccacattcactgaacctctttatcctgggtttgggttcaggtcctggcctggttctggt
gcctcagtgtctctgtgtcctcttcaggagggagagtctcctcctggtggagaaccttcc
tctctgctcaccacatag
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integrated database retrieval system
