Gasterosteus aculeatus (three-spined stickleback): 120829188
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Entry
120829188 CDS
T07457
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1
KO
K11471
additional sex combs-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120829188 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120829188 (asxl1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120829188 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
120829188
NCBI-ProteinID:
XP_040049041
LinkDB
All DBs
Position
XII:18960076..18971810
Genome browser
AA seq
1619 aa
AA seq
DB search
MKDKQKRKKERTWAEAARMVLENFSDAPMTPKQILHVIQTKGLKEMRSGTAPLACLVTML
HSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKTTSESDTAAEPASSTAAPASSSSTA
AAGGGASAGPTQSPEQESCDSTETTAAASGDNDASVDESSSSASCSAEVPAPSNQPQTRL
SRAAGQQGRTDTQQTQHAQHTQTRLSRSRQSGRQRKKAVMMPRVVLTPLKVNGEHVPSGP
MKRNRGGVDVDFETPGSILVNTNIRALINVRTFSAFPAHSQQQLLQLLPEVDRQIGPDGM
ARLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQEMEKEKKVEAWKEKFFEEYHG
QKSGLTQEESLKLTMSEASEVAASVLDTDVAAVATGAPKRRSVGRRRRDGRMRRRTRADL
RRRARRTLCKPTPPALQSAEAAEASAALDSPAVSIGSPMSDNTIVQGEVVLQAECGVELP
TESPSIELKASPTPEPITLPAPTAHPAPNATPAPTPTPTATPAPTPTPTATPAPTPTPTD
TLTPTATPEPTPEPTPEPTPEPTPTPASTPTPTTTPTPTPSPESPSANEEPEAEAAAAAA
RLLPEETLPVLASTSSPSSSSSSSSSSSSSSSSSSSASSPVSSPSSPSDRQGVFAAGLDS
SSSSSASSSVAVVADPLDDTASVVTSVTGGTTTSSRDSSPSASPATTSVPNAQLKEQKRR
PDETQAISSFPEKRPRLDDRQSFRTTIDSVRSEKPQPTTEEPKVPPIRIQLSRIKPPWVK
GHPTYQICPRIVPPGEGSRRAGTGGARTLADIKARAQQARAQREAAAAVAASGDGAGTVG
VRLRPASGLSDSSNGRRAREHPGPIEPGGGGGGGGGRGRRGSGGMEEQGSSSGTNSSGTQ
LQLFNVEPTPEPSSSLSATSTSMSLELPQISSPPQEEAAARSEVLEEVGTTLAGVQSSSN
GLTDQAADSPSPKPEVPASPVEMTAHGYLKPSLAPTSIPDSLPRFGAQGVDVIQTLASSC
HSKEQVHGREAGLGGVIHHGSYHVESQDVISHSAAKRLQTETSSPQHADSGGEKDNDAGT
HSDSTETASDCENDIQEDEGQQQQPEQDWCPQVSIKRNGPLVICSPPPQNQHPVIQAYVS
SRHGQTVIQPCFPNGLHNPQHSGHYQGHQSLPTSHPQGLRDTNVVVKMEPGEDCGASRES
PAEEEYHGCLKASVTQPTATTASKRLASSLRLVSSVEANNPLVTQLLQGSLSLEKVLPSH
SANRLEISRLPGPQPRPPMARTPGPRNRPEVSAQSSGPEQGAASQIPNQFPTGCPVSCLM
EAPAAPQYQSQSQQAPGAVPVITSLPPSSSSRRKSDLSSQTALESAVIKDSHGHQPSKGV
DEDRPQTAHRTMPNGPLPPHADPCPTEVAPTVKTNWRPSHIQPHPSHQLQLSPTPTVKNE
VGARPPCQALAKSAPIKTMSVTKKEPGGAVDGYLSGGAMEGLLNMEMTLARMAKKEHGKA
TYSCGSPSSSPSALPFQLYGKFPKHSGVGGVSYTANVSVMDNGGFSRSMADSVLQLRPCL
SSSQTTLSIQAFTDSTADEVALKCSCRLKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaaacaaaagagaaagaaggagcggacctgggctgaggcagctcgcatggtt
ttggagaacttctcggatgcacccatgactccgaagcagatcctccatgtcatccagacc
aagggcctcaaggaaatgcggagtggcacagcaccgttggcctgcctggtcaccatgctg
cactcccaggtgaggggagaccgagtcaagaacagcatcttcttcaagctgcctgggcgg
atgagcctgttcactctcaagaagaacgccctccaatggacaaagacgacatccgagtcc
gacactgcagcggagccggccagcagcaccgcagccccggcatccagcagcagcacagcg
gccgcaggcggcggggcctctgccggccccacacagtctcctgagcaggaaagctgcgac
tccacggagaccacggctgctgccagcggagacaatgacgcctcggtggacgagagctcg
tcaagcgcatcctgctccgctgaagtgccggctcccagcaaccagccccagacacgcctc
agcagggcagcaggacagcaaggacgcacagacacccagcagacccaacacgctcaacac
actcagaccagactgagccgctcaagacagtcagggaggcagaggaagaaagccgtcatg
atgcctcgcgttgttctcacccctcttaaagtgaatggagagcatgtcccctcaggcccc
atgaagaggaatcgaggcggggtggacgtagactttgaaacaccaggctcaatccttgtc
aacaccaacatcagagccctcatcaacgtgcggaccttctccgccttccccgcccactcg
cagcagcagctgctgcagctgctgccagaggtggaccgccagattggaccagatggtatg
gctagactgagcagctcagctctcaacaatgagttcttcacccacgcctcccagagctgg
aaagagaggctggcggagggtgagttcacccacgagatgcaggtgcgtttccggcaggaa
atggagaaagagaagaaggtagaggcgtggaaggaaaagttttttgaagagtaccatggg
caaaagtctggtctgacacaagaagagtctctaaagctcaccatgagtgaagccagtgaa
gttgcagccagtgtgctggacactgatgtggctgcggtggcaacaggtgcgcccaagaga
cgcagcgttggtcgacggaggagagatggcaggatgaggagacgcacgagagctgacctg
cgtcggcgggcccgtcggaccctttgcaagcccactcctccggccctgcagtctgcagaa
gcagctgaggccagtgctgcactggacagcccggcagtttctattggctctcccatgtct
gacaacacgattgttcaaggggaggtggtgctgcaggctgagtgtggtgtggagctccca
actgagagtccctccatagagctaaaggcctctcccaccccggagccaatcacattgcca
gccccaactgcccatccagcaccaaatgccactcccgcaccaactccaactccaactgcc
actcccgcaccaactccaactccaactgccactcccgctccaactcccactccaactgac
actcttactccaactgctactcccgaaccaacccccgaaccaacccccgaaccaactcct
gaaccaactcctactcctgcttcaactcccactccgactaccactccaactccaactccc
agcccagagtccccaagcgcaaatgaggagcctgaagcagaagcagccgcagcagcagcc
cgcctgctaccagaggagactctacccgtactggcgtccacctcctccccatcttcttcc
tcctcctcctcttcctcttcctcctcctcgtcatcttcttcttcgtctgcctcctcgcct
gtttcctcaccctcctcaccttctgatagacagggagtctttgctgcaggcctggactct
tcttcatcctcctccgcatcctccagtgtcgccgtcgttgccgatccactggatgacaca
gcctctgtggtcacctccgttacaggaggtaccaccaccagcagccgcgacagtagcccc
tccgctagcccagccaccacctctgtgcccaatgctcagctcaaggagcagaagagaagg
ccagatgagactcaggccatctccagctttcccgaaaaaaggccgcgacttgacgaccgt
cagtcctttcgtaccacaattgacagtgtccgctcggagaagccgcagccgacaacagag
gagcccaaggtgccgcctatccggattcaactgtccagaatcaaacccccctgggtcaaa
ggccaccccacctaccagatctgtccccgaatcgtgcccccgggggagggctcgcggcgg
gcggggacggggggggcgcgcaccttggcggacatcaaagcccgggctcagcaagcccgg
gcccagcgggaggccgctgctgctgttgcagcctctggcgacggggcagggacggtcggg
gtccggctgcggcctgcttctgggttatcggatagcagcaatggacgaagagcgcgagag
catccaggacctatcgagccaggaggaggaggggggggaggaggaggaagaggaagaagg
ggaagtggtggcatggaggagcagggatcgtcttcaggcacaaattcgtctggaacacaa
ctacagcttttcaacgtagagccgacacctgagccatcctcctccctttccgctacctca
acctccatgtccttggagctgccgcagatctcaagccctcctcaagaggaagccgccgcg
cggtcagaggttctagaggaagtaggaacaacgttagccggtgttcagagctcctccaat
gggctcacagaccaggcagctgactcaccctctccaaagcccgaggtgcctgcctcccct
gtagagatgactgcccatggttatttaaaaccctctctggccccaacctccatcccagat
tctctacctaggtttggggctcagggtgtggatgtgattcagacactggcaagctcctgt
cactccaaagagcaggtacatgggagggaggctgggctggggggcgttatccatcatggt
tcctaccacgtggaatcccaggacgtaatctctcactcagccgcaaagagactgcaaaca
gagacatcctctccccaacatgcagactctggtggcgagaaagacaacgacgctgggaca
catagtgactccacggaaacggcttcagattgtgagaatgacatccaggaggatgagggg
cagcagcagcagcctgaacaagattggtgcccccaggtgagcattaagagaaacggccca
ctggtcatctgcagccctcctcctcagaaccagcatccagtaatccaggcctacgtttcc
agccgtcacggtcagacggtcattcagccctgctttcccaatggactgcacaacccgcag
cacagtggtcattaccagggccaccagtctctccccacatcccacccacaggggctgagg
gacaccaatgttgtggtcaagatggagccaggcgaagattgcggagcttccagagagagc
cctgctgaagaggagtatcatggatgtttaaaggcctctgtcactcagccaactgctacc
acggcatccaagagactggccagctcacttcgactagtatccagtgtagaagccaacaac
cctttggtcactcagctactacaaggcagcctgtccctggagaaagttctaccgtcgcac
tctgccaacaggctggagatcagccgattgccaggaccccaacccagaccaccaatggca
cggaccccagggcctcgcaacaggccagaggtctcagcccagtcttctggcccagaacag
ggcgcagcctctcagatacctaaccagtttcccacaggatgcccagtgtcctgtttgatg
gaggccccagctgcaccgcagtatcagtctcagtctcagcaggctcccggggctgtcccg
gtcatcacctctctgccaccctcctcatcctccagaagaaagtctgaccttagctctcag
accgcattggagtctgcagttataaaagactcacatggtcatcagccctcgaagggggtt
gatgaagacaggccccagacagcccaccgaaccatgcctaatggaccccttcctccccat
gcagacccctgtcccacagaggtggcgcctactgttaagaccaactggcgaccctcacat
attcagccccatccatcacaccagctgcagctgtctcctacgcccacagtaaaaaatgaa
gtaggtgcacggcccccttgccaggctcttgccaaatcggcccccattaaaaccatgagt
gtcactaaaaaggagccagggggcgctgtggacggctacctgagtggaggggcgatggag
ggactcctcaacatggaaatgactttagccaggatggcaaagaaagaacacggcaaagct
acctactcctgcggctctccctcctcctccccctccgcccttcccttccagctatatgga
aagttccccaagcacagtggtgttggaggagtaagctacacggccaatgtgtcagtgatg
gacaatggcggtttctcccggagcatggcagacagtgtgctccagctgcgcccctgcttg
tcctccagccagaccacccttagtattcaggcctttactgacagtacggcggatgaggtg
gcgctcaagtgttcgtgccgcctcaaagccatgatcatgtgccaaggctgcggtgccttc
tgccacgacgattgcatcgggccctccaaactgtgcgtgtcatgtctggtggtgagatag
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integrated database retrieval system
