KEGG   Gasterosteus aculeatus (three-spined stickleback): 120829202
Entry
120829202         CDS       T07457                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00310  Lysine degradation
gat01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gat00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    120829202 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120829202 (plod1a)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     120829202 (plod1a)
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120829202 (plod1a)
SSDB
Motif
Pfam: GT_PLOD 2OG-FeII_Oxy OGFOD2-like Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 120829202
NCBI-ProteinID: XP_040049072
LinkDB
Position
XII:19572824..19584465
AA seq 727 aa
MRLSAGVLLCALLSLAAGDEQRLPEEELVVVTVATRETDGFKRFFRSAKHFNYTVKVLGE
GEKWKSGDHTSSPGGGQKVRLLKAAVEDMKDEKQILLFVESYDVVFASGPSELLKKFQQA
RHKVVFSSESLIWPDRHLEDKHPHVAEGNRFLGSGGFIGHLPNIKEMLADWTGEDTDSDQ
LFFTNIYIDPVKRKSINITLDSRCRLFQNLHGALDDVVLKFEDGRVRARNVLYDTLPVVI
HGNGPTKLQINYLGNYIPNMWTFETGCTACHEDLRPLTALKESEYPLVLIAIFIQQPTPF
VEVFFERLLRLQYPKNRLKLFIYNQEAHHEGQLSSFVKDHGSLYQDVKLVGPEEEMDQAA
SRNLGFDVCRKDEDCDYLFVLDIEVVLENEETLQILIEQNLPIVAPMITRVGRLWSNFWG
ALSAEGYYARSEDYVDIVQGRRVGVWSVPYLSSVYLVKAGLLRSELSTYELFTSSLLDPD
MAYCHNVRGQGVFMYVTNMHTFGRILSTQNYQTSHLHNDLWQIFENPVDWQERYIHENYT
RIMRDQLIETPCPDVYWFPILSDVGCNHIVEEMEHFGKWSGGATTDNRIQGGYENVPTID
IHMNQINFEKEWQKFLLEYIAPITEKMYPGYFTKALFDLAFVVRYKPDEQPSLRPHHDAS
TFTLNIALNQVGPDYQGGGCRFLRYNCSVQAPRKGWTLLHPGRLTHYHEGLPTTGGVRYI
AVSFVDP
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgagactgtcagcgggggtcctcctgtgcgcgctcctgtccctggcagccggggacgag
cagcgactccccgaagaggaactcgtggttgtgactgttgcaaccagagagacggacggc
ttcaagcgcttctttcgctcagctaaacatttcaactacactgtgaaggtccttggcgaa
ggggagaaatggaagtctggcgaccacacgtcatctccaggaggaggtcagaaagtgcgc
ctccttaaagccgctgtggaggacatgaaggacgagaagcagatcctccttttcgttgaa
agctacgatgtggtgttcgcttcaggccccagcgagctactcaagaagttccagcaggcc
agacacaaggtggtgttctcctctgagagcctgatctggcccgacagacacctggaggac
aagcacccccacgttgccgagggcaaccggttcctaggctcaggaggttttattggccac
cttcccaacatcaaagaaatgctcgctgactggacaggagaggacacggacagtgaccag
ctgttcttcaccaacatttacattgatccagttaaacggaaatccataaatatcactctg
gacagcagatgcagattgttccagaaccttcacggtgccctcgacgacgtggtgctgaag
tttgaggatgggcgggtacgagccagaaatgtgctgtatgatacgctgcctgtcgtcatc
cacgggaacggacctaccaagctccagatcaactacctgggtaactacatccccaacatg
tggacgtttgagaccggatgcacagcgtgtcacgaggatctgcgccccctcacggcgctt
aaggagagcgagtaccccctggtgctcattgccatcttcatccagcagcccactcctttt
gtggaagtgttctttgaacgcctactgaggctccagtatcccaagaacagattgaaactc
ttcatctacaaccaggaagcccatcacgagggtcagctgagctcctttgtgaaggaccat
ggaagcttgtatcaggatgtcaagctggtcggccctgaagaggagatggatcaagccgca
tcccgcaacctgggctttgacgtgtgccggaaggacgaggactgtgactatttgttcgtc
ttggacatagaagtggttctagagaacgaagaaacacttcaaatcctcattgaacaaaac
cttcccatcgtggcgcccatgatcactcgcgttggacgactgtggagcaacttctgggga
gccctcagcgcagaaggctactacgcccggtctgaggactacgtggacatagttcaaggg
cgcagagtcggtgtgtggagcgtcccgtacctgtccagtgtgtacctggtgaaggccggc
ctccttcgctcagagctctccacctacgagctgttcacctcaagcctcttagaccccgac
atggcctattgccacaacgtccgtggccagggagtcttcatgtatgtcaccaacatgcac
acgtttggccgcatcctgtctacacaaaactatcagacgagccatcttcataacgacctg
tggcagatctttgaaaatccagtggactggcaggagcgctacattcatgagaactacacc
cgcatcatgagagaccagctgattgaaactccttgtcctgatgtctactggttcccaatt
ctgtctgatgttggttgtaaccacatcgttgaagaaatggaacattttgggaagtggtcc
ggaggagccactacggacaacagaatccaaggaggctacgagaacgtccccaccatcgac
atccacatgaatcagatcaactttgaaaaggaatggcagaagttcttactggagtatata
gcgcctataacggagaaaatgtaccccggctacttcaccaaggctctgtttgacttggcc
tttgtagttagatataagccagacgagcagccgtctctgagaccacatcacgacgcctcc
actttcactttaaacattgccctcaatcaggtgggccccgattaccagggaggcggatgc
cggttcctccgctacaactgctcggttcaggcgccgcgtaaaggctggaccctcctgcac
ccgggccgcctcacgcactaccacgagggcctgcccaccaccggcggcgtgcgctacatc
gccgtgtcctttgtggacccctga

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