Gasterosteus aculeatus (three-spined stickleback): 120829302
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Entry
120829302 CDS
T07457
Symbol
nphp4
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120829302 (nphp4)
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120829302 (nphp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
120829302
NCBI-ProteinID:
XP_040049231
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All DBs
Position
XII:14534635..14649809
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AA seq
1435 aa
AA seq
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MVKTEDTPDMADGWREVFERSRVLPPPSQTVRLALDNHFTQSLGSQLTLSRLTAAHLPQA
QETTGGGQEVTYQLRVTLFDRSHQHFFGNTWKSPSLRMKNKKIPVNEVLYFHTSLRLPST
VVVLELVSLSPRPDGSQQALGRGFAVLELFTNRPEAQAADGDRRLNLHHGSPRSLLHPLV
KATDDYSSLLTTIDGAHLDCAVKNHQALVSVMHLLPENVLISGKEKIPGLAASPTGDSLL
RPQPLKMLPFTLHRLTISLQPSLEKFESQLLQLINDDCRNTKQPGSEAALRTVVIQERRL
LVGVHNGWCFLDKPQVVVLEAAAAGSRGRADSTSKQSAPVKDRSALSTLPHTLGLRGSLE
LKLTNHHALAIVFQLEWVFSAPMGRETMLSAASTSRAAFLQCLRWGAWCPFRESADWKGE
EIQLVLQGGARPNPHAVMVYRTEMSAKAQSPAPLSAPGSAQAKDTITFRLSSAPERKASS
PKASLRTKREDESRRRRSPSSPSQGQKNIQPTSPPESPQGPGLSLSQLAATSRYPTISHS
SSALPWQQSFPSLLHPSPLASAHQLSHVACSGVGNIAHLEMDLHREGDGPLSAQDEGDQL
QELPFTPVHAPVITLGVSMPSSSSVGSRSSLAHLYSAGFPDIVDSAGQAAEVLDPTEPVP
FDPQREESDPLQGNLLVFQFLAFNRIPTAGVAANWPENIHFTFQFYRFPPVTSQQLKLLT
SDKVQQQAAGPLPCVLASINKDGTFNSASPGLQVQFRVDSLKPGERRWFLRYLALHTMHI
DVWDSDSLLLIGSTAVELKYMLRQGKSAVQALHEVEVLTTDYLGDDTLLTSTDVGLRPAR
TPMSVHTIIRGRLHIRTGNIGCPVDPSSRRATDVMASHLNIITPRGGSVGFRGGSLSSRN
TLQLNGRNAAQAPGPEMEAQPNLNGPDGRRRKLDCMAAVRRREGTDEPKVTDRTTEARFA
REPHQIKPSGKHSEAEAIGNMLSRSITTQHLLYAGLGAAEYMEFVLKNPFNVPQTVTIHS
DDPELSVITTTEEWAYFKALTETPTPLEENMFHLEEGAPGPKVYLRPRESIHIPLKYQSF
LCDHTVALQGPSFQPTHKGSQVAKRNLSNIVAAKTIKVTFSAEDGKPMAICQLNVEPTPH
VVDQTFRLYHPELSFLKKAIRLPPWNNPEVGDPDVRTHISVRCSDPNVICQTRMLAPGEP
QDVYLKVPGSPSPHIKMFFVMVFTDRWMAAPSQIWQIYVHFLERVDVSCVTGQRSCQSLV
LRGKQAVRKVKCFSSHPQEIQVDPAGVFLLPPAALQELQLKLQPWRAGSRFLYVNAVDVE
QRRLVTAWLLCLNVHRPVLSKAFEVCVPVCGGRGSSRKITYTNPYSSSRAFLLRSDHPDL
LQFKEEKFQISGGETYTIGLRFAPSQSAGSVEILVYVNNLEEKTEETFCVKVNYS
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaacagaagacacgcccgacatggcggacggctggagagaagtgttcgagaga
agccgggtgcttcctccgcccagccagacggtccgcctggctttggacaaccacttcacc
cagtccctcggctcccagctcaccctcagccggctcaccgcggctcacctcccgcaggcc
caggagacgacaggtgggggacaagaggtgacctaccagctgcgagtgaccctttttgat
agaagccatcagcacttctttgggaacacgtggaagagtccctccctgaggatgaaaaac
aaaaagatccccgtcaacgaggtcctgtatttccacacgtctctgcggttgcccagcaca
gtcgtggtcctggagctggtgtcgttgtcacccaggccagatggctcccagcaggccctg
gggcgaggcttcgctgtcctggaactttttaccaacaggccagaggctcaggctgctgat
ggggacagaaggctgaatctacaccatggatcaccacggagtctcctccatcccctcgtg
aaggccacagatgactacagcagtctcctgacaacaattgatggagcacatttggactgt
gctgtaaaaaaccaccaggcgttggtgtccgtgatgcacctcctgccggagaatgtcctt
atatccggaaaggagaaaattcccgggcttgcagcttctccaacaggagactctttactg
aggcctcagccgctgaagatgctgcccttcaccctgcacagactgaccatctccctccag
ccgtccctggagaagtttgagagccagctgctgcagctgatcaatgacgactgccgcaac
acaaaacaaccaggatcggaggctgctctgagaacagtcgtcatccaggaaaggaggctt
cttgtcggcgtccacaacggctggtgtttcctcgacaagcctcaagtggtggtgctggag
gccgcagcggcagggtccagaggtcgagccgacagcacctccaaacagagcgccccggtg
aaggacagatcagcactctccaccctccctcacacgctgggcctccgcggcagcttggag
ctcaagctgaccaatcatcacgctttggcaattgtcttccagctggagtgggtcttctcc
gctccgatgggccgagagacgatgctgtctgccgcctccacgtcccgagcggccttcttg
cagtgcctccgttggggcgcttggtgtcccttccgggagtcggctgactggaagggggaa
gaaatccagcttgtcctacagggtggtgcaaggccgaacccccacgcagtcatggtctac
agaacagagatgtctgccaaagcccagagccctgcgcccctctctgctcccggctcagct
caggcgaaggacaccataacgtttcgtctctcgtcggctccggaaaggaaggcatcgagc
ccaaaggcatctctgaggacgaagcgggaggatgagtcacgtcgcagaaggtcaccatca
tcgccttcacagggccaaaaaaacatccaaccaacttctcccccagaatcacctcaaggc
cccgggctctcgctgtctcagctggcagctacttcccgctacccgaccatcagccactca
agctcggcgttgccgtggcaacagtcgtttccttctctgctccatccttccccgttggca
tcggcccaccagctgtcacatgtcgcctgctctggtgtcggcaacattgcccacctggag
atggacctccacagggaaggcgatgggccactttcagctcaggacgaaggagaccaactt
caggagctgcccttcactcccgtccatgcccctgtcatcacactgggggtgagcatgccc
agttccagctcagtcggctccagaagttcactggcccacctctactcggcgggcttcccc
gacatcgtggactctgctgggcaggcggcagaagtcctggacccgacagagccggtgccc
tttgaccctcagcgcgaagagtcggaccctcttcagggaaacctgctggtctttcagttt
ttggcgtttaacagaataccaacggcaggtgttgctgccaattggcctgaaaacatccac
ttcaccttccagttctatcgctttccaccagtcacatcccagcagctcaaactactgacc
agtgacaaggtccaacaacaagctgctggtccacttccctgtgtcctggcctccatcaac
aaagacggcactttcaactctgcctccccgggcctgcaggtgcagttcagagtagactcc
ctgaagcccggagagaggcgctggttcctgcgctacctggccctccacaccatgcacatc
gacgtctgggacagcgactcgttgctcctcataggttctactgccgtcgagctcaagtac
atgttgcgtcaaggtaaatcagcggtgcaggcccttcacgaggtggaggtgctgaccact
gattacttgggagacgacaccctgctgaccagcacagatgtgggcctacgtcctgctcgc
acgcccatgtcggtgcacaccatcatccggggccggctgcacatacgcacaggcaacata
gggtgcccagtagatcctagcagcaggagggccacagacgtgatggcatctcatcttaac
atcataactcctcgcggagggagtgttggattcagaggaggaagcctgtcctccagaaac
accctccaactcaatgggaggaacgccgcacaggcacccggaccggagatggaggcgcag
cccaacctaaacgggcccgacggccggcgccgcaagctcgactgcatggccgcagtgcgt
cggcgggagggcacggacgaaccgaaggtcacggatcggactacggaagcccggtttgcc
agagaacctcatcagatcaaacccagcgggaagcacagcgaggcggaggcaatcggcaac
atgctgagccggtccataaccacccagcacctgctctacgccggcctgggcgccgctgag
tacatggagtttgtccttaaaaatcccttcaacgtccctcagacggtcaccattcacagt
gacgacccggagctaagcgtcatcacgactacggaggagtgggcttacttcaaagcgcta
accgaaaccccaaccccgctggaggagaacatgtttcacttggaggaaggtgccccaggt
cccaaggtttacctgcggcccagagagagcatccacatccccctgaaataccagagtttc
ctctgcgaccacaccgtggcccttcaggggcccagctttcaaccgacacacaaaggttcc
caggtggccaagagaaatctgtccaacattgttgctgccaagaccattaaggtgacgttc
agcgcggaagacggcaagccgatggccatctgccagctgaacgtggagccgacgcctcac
gttgttgaccagacgttccggctctaccatcccgagctcagcttcctcaaaaaagccatc
cgcctgccgccctggaacaaccccgaagttggagacccagatgtcaggactcacatttcc
gtacgctgcagtgacccgaacgtcatctgccagacaaggatgcttgcgccaggggagcct
caggacgtgtacttgaaggtgccggggagtccgagtccacacataaaaatgttctttgtt
atggttttcacggataggtggatggcagcaccctcccagatctggcagatttacgtgcat
ttcctggagcgggtggatgtcagctgtgtgactggccagcgcagctgtcaatccctggtg
ctgagggggaagcaggctgttcgcaaggtcaaatgtttctcatcacacccccaggagatc
caggtggacccagcaggtgtgttccttctgcctcccgcggcgcttcaggagcttcagttg
aagttgcaaccgtggcgggctggaagccgcttcttgtacgtgaacgccgttgatgtggaa
cagcggcggctggtcactgcctggctgctctgtctcaacgtccaccggcctgtactgtcc
aaggcatttgaagtgtgtgtcccagtctgtgggggccgcggaagctccaggaagatcacc
tacaccaacccatacagcagcagccgggccttcctgctgcgctcggaccatccagacctg
ctccagttcaaagaggagaaattccagatcagcgggggagagacttacaccatcggcctg
cggttcgcccccagccagagtgccggctcggtggagattctggtctacgtgaacaacctg
gaggagaagacggaggagacgttctgtgtgaaagtcaactactcgtga
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