KEGG   Gasterosteus aculeatus (three-spined stickleback): 120829427
Entry
120829427         CDS       T07457                                 
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gat00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    120829427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gat04121]
    120829427
Enzymes [BR:gat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120829427
Ubiquitin system [BR:gat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    120829427
SSDB
Motif
Pfam: PRY SPRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4 zf-B_box zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 RING_XB3-XBAT31 U-box zf-RING_10 zf-RING_4 zf_RING_Vps8
Other DBs
NCBI-GeneID: 120829427
NCBI-ProteinID: XP_040049439
LinkDB
Position
XII:complement(16300608..16304279)
AA seq 504 aa
MSLSKPEELLAHELSCPICLQLFSDPVVLPCGHNYCLACIRMTADSTDDAPPRCPECRDE
YQGVETLKRNFKLCSIIEGYRAAAAAAETRADEPDSAAEAPCSGRETEWDAKSCATHRRP
IEYFCSDDMSLMCGVCFSEGRHCNHDVLTLEAAEEEMRRALENRSTLVSQRLHMTESLLQ
VTAKEQGAAEAIGNKLANKAVTVMESMAALVDGYRDCLRLLLEEEKNMRRKSWQVGLDAL
EVQQQQLVQAQQRATQALSETDTCTFMQRFMQIEPKLREVATGAFPSGVPSKAPLNPKRL
QAGLKTQDFRSEMTRHLDSLHILLNPLELTFNLCTAHPNLLVSSDQRTVKYSPVKQTYPD
HSERFTSAPQILCTQGFSGGEHVWVVEVGGSSMWSMGVCYKSIPRRGDHSRLGHNSVSWR
LQWKNGKLTVCQSSCNVALGEMSHHPLRVEVALDYEAGTLMFHNVRGRREHLHTFRAVFR
EPLYPAFSMHSHTPESWITLHNGM
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtcgttgtccaagcccgaggagctgctggcccacgagctgagctgccccatctgcctc
cagctcttctccgacccggtggttctcccctgcggccacaactactgcctggcctgcatc
cgcatgaccgccgactccacggacgacgcgcctccgcgctgcccggagtgtcgcgatgag
taccagggcgtggagaccctgaagaggaacttcaagctctgcagcatcatcgagggctac
cgagccgccgccgccgccgccgagacgcgcgcagacgagcccgacagcgcggcggaggcg
ccgtgctccggccgggagacggagtgggacgccaagagctgcgccacccaccggcgtcca
atcgagtacttctgttccgacgacatgagcctgatgtgcggcgtgtgcttctctgagggc
cgccactgcaaccacgacgtgctcaccctcgaggcggcggaggaggagatgaggcgcgcg
ctggagaaccgcagcacgctggtttcgcagaggctgcacatgaccgagagtctccttcag
gtgacggcgaaggagcagggagcagctgaagccatcgggaacaaactggccaacaaggcg
gtcactgtcatggagagtatggctgctctagtggacgggtacagggactgtctgcgtctg
ctgttggaggaggagaagaacatgcgcaggaaaagctggcaggtgggactggatgctctg
gaagtgcaacagcagcagttagtgcaggcccagcaacgtgccacgcaggccctcagcgag
acggacacgtgcaccttcatgcaaaggttcatgcagatcgaacctaagctgagagaagtt
gccacaggcgcctttccctccggcgtcccctcgaaagcaccgctcaaccccaagcgtctc
caggcgggcctcaaaacccaagacttccgctctgagatgacccgccacctggattccctc
cacatactcctgaaccccctggagctcaccttcaacctctgcaccgcccaccccaacctg
ttggtctccagcgatcagcgcacggtcaagtacagccccgtcaagcagacgtacccggat
cactcagagcgcttcacaagcgccccccagattctctgcacccaggggttctcggggggg
gagcacgtgtgggtggtggaggtggggggcagcagcatgtggtcgatgggcgtgtgttac
aagagcatccctcgccgcggggatcacagtcgtctgggtcacaactccgtttcctggcgg
ctgcagtggaaaaacggcaagctgacggtgtgccagtcctcctgcaacgtggctctgggg
gaaatgagccatcatccactgagggttgaggtagcgctggactacgaggcagggacgctg
atgttccacaacgtcagagggcgcagggagcacctgcacactttcagggcggtgttcaga
gagccgctttatccagcgttcagcatgcattcacacacaccggagtcctggatcacactg
cacaatgggatgtaa

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