Gasterosteus aculeatus (three-spined stickleback): 120829494
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Entry
120829494 CDS
T07457
Symbol
trim33
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gat01001
]
120829494 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120829494 (trim33)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120829494 (trim33)
Protein kinases [BR:
gat01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
120829494 (trim33)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120829494 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
EOS1
Motif
Other DBs
NCBI-GeneID:
120829494
NCBI-ProteinID:
XP_040049562
LinkDB
All DBs
Position
XII:15381029..15405761
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AA seq
1220 aa
AA seq
DB search
MADNKGEEDMEPSANSDCVPSAQDNDKPEKKDENAVIVIDSNTKGEDETESNNKGNETPT
PTSDGGDVSSSGAAAAAAVVEVNVSVSNAVSPTGTSSTNAEPMAAEAVPAANAPVGGVTT
EMSPPPTAPAATPVPTPINFLDTCAVCKQSLQSRDCEPKLLPCLHSFCLKCIPQPDRQIS
VQVPGPHGQTDTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEASGASDEKAAQVCTSCE
DNAGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIHTKEDADAASESVGTSGQRPVFCPI
HKQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIEISVAKLQEKKNYVH
YSVSQVQSRLKELNDTHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMRLVSQ
HKDTTQLAQQIHHVLGFCQWAITTGSSTALLYSKRLILFQLRQLFKARLEPAPQANGVVR
FFCDPTFWAKNVVNLGNLVIEKPPIPVQQPGVMVGGPPISPGQVHHSKQAGQINLAQLRL
QHMQQAAYAQQKHHNNQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQIQQQMRIASQ
ISQQHARQTAQPMGQQQPPRLISMQQLTRGPVGMNGGPGPPMYSSSHHMRLPGPPQGRMP
TAQPRLNGPQYPAMMQPQLQRQHSNPGHAGPFPVASLHNANPTSPTSASVAGAHAHRGPA
SPIIGPIELIPSVTNPENLPCLPEIPPIQLEDAGSSNLGHLLSRYITASTQHHLGSVDMN
PSPGLSTHSPGSSGLSNAHTPARPSSNSSTGSRGSCSSAGKAGPAGGAPVEQMRVKQEPG
TEDSYNCPASSLKMELGKDSGRSACMMSSPDNTTHPVLGVATTGQDALKVLVERVKTEPQ
SDTPCSGLNGSSAAASSSANSTMTSTTSLSTENNNNNSSSSSTVGAPLTNGNSSKGTNDK
GELAGTGNSGGKEEDPNEDWCAVCINGGDLLCCDRCPKVFHMKCHVPTIKIFPTGDFLCT
FCRSLTTPEIEYCDDSKKIKGEQELSPEDQRKCERLLLHIFCHELSVGFREPVPSSVPNY
FKIIKQPMDLKKVKRRLQLRSSQYYRSIQEFVSDMRLIFKNCADYNEMSRIIQVYDEEKQ
INTQVGSEMAISGKAVSLYFEEKLLATFPGQSFPERQKRETECPESKEKMDDGDTDDSED
HFIQPRRKRLKTDDKVLHIK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaggaggatatggagccgtctgctaattcggactgtgtgccc
tcagcacaagataacgataagccagaaaagaaagatgaaaatgcggtcatagtcatagac
tcgaatacaaagggcgaggacgaaacagagtccaacaataaaggcaacgagaccccgaca
cccaccagcgacggcggggacgttagcagcagcggggctgctgctgcagcagcagttgtg
gaagtcaatgttagcgttagcaacgccgtcagcccgactggcaccagcagcaccaatgcg
gagccgatggcagcggaagccgtgcccgccgcgaatgcccccgtcggcggtgtcaccact
gaaatgtcccccccgccgacggctccggcggccacgccggtaccgactcccattaatttt
ctggatacgtgcgcagtgtgtaaacaaagtctccagagccgcgactgtgaacccaaactt
ctgccctgtttgcactccttctgcctgaaatgtatcccgcaaccagatcgacagatcagc
gtgcaggtacccggaccacacgggcaaacggacacacacatagtaaatgttatgcgctgt
tcggtgtgccaccaggactacaaacagagcgacatcattgataactactttgtcaaagat
accacagaggccagcggagcgtctgatgaaaaggctgcacaggtatgcacgagctgcgag
gacaatgcaggaaccatagggttttgtgtggagtgcggagaatggctgtgtaagacctgc
gtggaggcccaccagcgggtgaaaataaccaaggaccacaagatccacacgaaggaggat
gctgacgctgcctccgagtcagtcggtacgtcaggacagaggcctgttttctgtccgatc
cacaagcaggagcctctgaagctcttctgtgagacctgtgacaccttgacctgtagggac
tgccagctgctggagcacaaggagcacaggtatcagttcctagaggaggctttccagaac
cagaaaggcatcattgagatcagcgtggccaaactacaggaaaagaagaactatgtccat
tactctgtgtctcaggtgcaaagcaggttaaaagagctgaacgacacacacaagaaggtg
gagcacgagatcaaaattgcagtatttactcttattaatgagatcaacaagaagggcaag
tcccttctgcagcagttggagagtgtgaccaaagagcgcagtatgaggcttgtgtctcag
cataaggacaccacccagctggcccaacagatccaccacgtcctcggcttctgccagtgg
gccatcactactggcagcagcacggcgctgctctacagcaagagactgattctgttccag
ctccgccagctcttcaaggccagactagagccggcgccccaggcgaacggagttgtgcgc
ttcttttgtgaccccaccttctgggccaaaaacgtagtcaatctaggtaatttggttatc
gagaagccccctattcctgtgcaacagcctggcgtgatggtgggaggaccacccatttct
ccaggccaggttcatcacagtaaacaagcaggacagatcaacctagcccagctccgactg
cagcacatgcagcaggcggcctatgcacagcagaagcaccacaacaaccaacaacaacag
caacagcagcagcagcagcaacaacaacaacaacaacaacaacaacagcagcagcagcag
caacaacaacaacagcaccagcagcagcagatccagcaacagatgcgcatcgcctcccaa
atatcccagcagcatgcaagacagactgcacaaccgatgggtcagcagcagccgccaagg
ctcatcagtatgcaacagctaacgagagggcctgtgggtatgaatggggggccaggtccc
cccatgtactcttcctcccaccatatgcgtctcccgggtccaccacagggccgaatgccc
acagctcagcccagacttaatggaccgcagtatccggccatgatgcaacctcagctgcag
agacagcattccaaccccggccatgcaggccctttcccggtggcatcccttcataacgcc
aatcccacgagtcctaccagtgcaagtgtggccggtgcccatgctcaccgcggccccgca
agccccatcataggccccatcgagctcatcccctccgtcaccaaccctgagaacctgccc
tgcctgccggagatcccgcccattcagctggaggatgccggttccagcaaccttggacac
ctcctgtctcgctacatcacagccagcacgcagcaccacctcggctcagtggacatgaac
ccgtcgcctggactctccacacactctcctggatcatcaggtttgtcgaatgcccacacg
ccagcacgaccttctagcaattccagcacaggtagcaggggcagctgtagctctgcgggg
aaggcagggccggcaggcggagctcctgtggagcagatgagggtgaagcaagagcctggt
acagaggacagctacaactgtccagcatcttctctgaagatggagcttggaaaagattct
gggaggagtgcctgcatgatgagcagtccggacaacaccacccatcctgtattgggagtt
gcaactactggccaagatgctctcaaggttttagtggagcgcgtcaaaacagaaccccaa
tctgacactccttgttctggactaaatggctccagcgccgcagcctcttcttctgcaaat
tcaaccatgacctccactacctcattatccaccgagaacaacaacaacaacagcagcagc
agcagtacagttggcgctcccctcactaatggaaactccagcaaggggacaaacgacaaa
ggggagttggctggaacaggcaactctggtgggaaagaggaagatcccaatgaggactgg
tgtgctgtttgtatcaacggtggtgacctgctatgctgtgaccgctgcccgaaagtcttc
cacatgaaatgccatgtgcccaccatcaaaatattcccgacgggcgactttctttgtacg
ttttgccggagcctgaccacccccgagatagagtactgtgacgacagcaagaaaatcaaa
ggagagcaggagctgagtccagaggaccaaaggaaatgtgaacgcctcctgttgcacatc
ttctgtcatgagctcagcgtgggcttcagagaaccggttcctagctctgtgcccaactac
ttcaagattatcaagcagcccatggacctgaagaaggtgaagaggaggctgcagttgcgg
agctcccagtactaccgctccatccaggagtttgtgtccgacatgcgtctgatcttcaaa
aactgtgcggattacaacgagatgtctcgaataatccaggtttatgatgaggagaaacag
attaatacgcaggtgggatcagagatggcgatatccggcaaggcggtaagcctgtacttc
gaggagaagctgctggcgacgttcccagggcagagcttccctgaacgacagaaacgcgaa
accgagtgccccgagtccaaggagaagatggacgacggcgacacggacgactccgaggac
cacttcatacagcccagacgcaagcggttaaaaacggacgacaaagtgctccacattaag
tga
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integrated database retrieval system
