Gasterosteus aculeatus (three-spined stickleback): 120829532
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Entry
120829532 CDS
T07457
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120829532 (ccdc187)
Membrane trafficking [BR:
gat04131
]
Autophagy
Other autophagy associated proteins
Others
120829532 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
120829532
NCBI-ProteinID:
XP_040049643
UniProt:
A0AAQ4Q925
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Position
XII:4737781..4750313
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AA seq
794 aa
AA seq
DB search
MDEGSSEVFSADSLLSSTTVRQCFAVLEDGALAHNLQEQEIEQYYTTNIHKNQLVQNDIR
VAKRLQDEEEEEQAQQSTLHRQSSRRLEMEDFEYARVVQEEIQRCAEEARRREQEDKEIA
KQMQEEEKERITRISRGWDGLNEGRTIDPAPPSPRQHTLTGLHHGGAQYSSTTTRWQYST
SHSHSDFTRPPAYSPRGVDAQKNTTPWSNQGHTDSIRENTSELRERLSEDSEDSDTVFSE
RLIERLDTAPPRRRASLYQPPERNYRSLYSRRSYTEEERGERTENYNESGDLERRNRRNL
DAQSEENRGLHSGREQARDCRSVEVRERRSSRSKSVRLHDRRKPSNGDLARTWSCTENPD
KHVRFQDDTRRSPRPQGDALHVWEMLGQVLRERGVPVRFGCKGAPLQIRPAGRDSLVLHG
SEVSCSDSRPHQGAFRRAAATRHSFHGDIREGKRYPESSGRDHRDWQSKDRNLNEISGRD
SNHPARGERGGSRRWKDHRRTEGDGSERNANHCRVERTTSQRRRFRPEAVEERLSSEEEG
REAGRGGERPLPRAPQRTRSLGSSRASSGGRWRRAAAGAPVQAEAGGASLDLRELRQVLQ
DEELAHKLQEEEERLLRRNSRTSPCVYPEGDFRVAQVAQDEEIAHFMQKQEMKSKRRSRE
LEGPESWREHRGMISGRAARDRPVHRERLDSEGLPSPTEDGSPENQPPSPFATIPESQQF
RNIAEELDPTFQGERPSTEGFGGGAEGTTCQSLPMPQTGLNDLLEEATFIPPTKRKTDKS
GRVKSKKKDNCKHQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggcagctcggaggtcttttcagcggatagtctcttaagctccacgacagtg
cgccagtgcttcgctgtgctggaggatggagcgctggcacacaacctgcaggaacaggag
attgagcaatactacacgaccaacatccacaagaaccagctggtgcagaacgacatccgt
gttgccaaaaggctgcaagacgaggaagaagaggagcaggcccagcagagcaccctccac
agacagtcctccaggcgactagagatggaggactttgaatacgcccgtgtagttcaggag
gagatccagcgttgtgccgaggaggcccggaggagggagcaggaggataaggaaatagct
aaacaaatgcaggaagaggagaaggagagaatcacaagaataagcagagggtgggacggc
cttaatgaaggccgcactatcgaccctgcaccaccgtccccacgccagcacacactcact
ggccttcaccacgggggggcgcagtactcgtctaccaccaccaggtggcagtactccact
tctcacagccattcagacttcaccaggcctccggcttactcccccaggggggtagacgct
cagaaaaacacaactccatggtcgaatcaaggacacaccgactccattagggaaaacacg
agtgaattgagggagcgtttgagtgaggattcagaggactcagacaccgttttctctgag
agactgattgagagactcgacacggcgcctcctcgacggcgggcatctttatatcagccg
ccagagaggaactacaggagtctttactctcgccgcagctacacagaggaggagagaggc
gaaaggactgagaactataatgaaagtggggatctagagaggaggaaccgtaggaatttg
gatgcccagagcgaggagaaccggggtctccacagtggcagggagcaggctagagactgt
aggtcggttgaggtcagagaaaggcgatccagtcgcagtaaatctgtcaggctacacgac
cggaggaaacccagcaacggagacttggcgaggacctggagctgcacggaaaacccagac
aaacatgtccgatttcaggatgacaccaggcgctctcccaggccgcagggagacgcgctg
cacgtctgggagatgctgggccaggtcctcagggagaggggcgtgcctgtgaggtttggc
tgcaagggggcgccgcttcaaataaggcctgcaggcagagacagcctggtgctccacggg
agcgaggtctcctgcagcgactcccgaccacatcagggagcgttccggagagctgccgcc
accaggcacagtttccatggagatatcagggaggggaagcgatacccagagagcagtggg
agagatcacagagactggcagagcaaagacagaaatcttaatgagattagtggaagagac
tccaatcatcctgcgcggggagagcgggggggcagcagacggtggaaagaccacaggcgc
accgaaggtgacgggagcgagaggaatgcaaaccactgcagggttgagaggacaacgagc
caacggcgcaggtttcggcccgaggccgtagaagaaaggttaagctcggaggaggaaggg
cgggaggcggggaggggaggagagcggcccctcccaagagccccacagcgcacccggagc
ctcggcagcagccgggcgtcaagcgggggtcggtggaggcgcgcggcagcaggagcgccg
gtgcaggcggaggcgggcggggccagcctggacctgcgggagctgcgtcaggtgctgcag
gatgaagaactggctcacaagctgcaggaggaagaggaacggctgctgagaaggaactct
cggacctctccatgtgtttacccagagggagacttcagagtggcacaagtggcgcaggat
gaggaaattgctcactttatgcagaagcaggaaatgaagtccaagcgaagatctcgggag
ctcgaggggccggagtcgtggcgcgagcacagagggatgattagcggtcgagctgcacgg
gacagaccggtccatcgagagagactcgattcagaaggccttccttcccccactgaggac
ggctccccagagaaccagccgcccagccccttcgccacgataccagaatcccagcagttc
cgaaacattgcggaggagctggacccgaccttccaaggcgagaggccgagcacagagggc
ttcggggggggggcagaaggtacaacctgtcagtcactcccaatgcctcaaactggcttg
aacgacttactcgaggaggcgactttcattccccccacaaaacggaaaacggacaaatcc
gggcgagttaaatctaaaaagaaggacaattgcaagcatcaataa
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