Gasterosteus aculeatus (three-spined stickleback): 120829556
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Entry
120829556 CDS
T07457
Name
(RefSeq) acid-sensing ion channel 1A-like isoform X1
KO
K04829
acid-sensing ion channel 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120829556
Ion channels [BR:
gat04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
120829556
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ASC
EFP
Motif
Other DBs
NCBI-GeneID:
120829556
NCBI-ProteinID:
XP_040049698
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Position
XII:complement(3573549..3603812)
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AA seq
508 aa
AA seq
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MDLKVETEEMDASQPPPVEVFAHSSTLHGISHIFTYERFCVKRCLWVVCFLGSLTFLLFL
CVDRIHFYFEYPHVTKLDEVTTPIMTFPAVTFCNLNAFRFSRVTRNDLYHAGELLALLNQ
RYEIRDIHLVEESVLESLKVKADFHNFKPRPFNMREFYDRTGHDINDMLLACHFHGTECR
AEDFKVVFTRYGKCYTFNAGGDGRPPLFTTKGGMGNGLELMLDIQQDEYLPIWGETDETS
FEAGVKVQIHSQDEPSFIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKVTAMDSDFF
DSYSITACRIDCETRYLVDNCNCRMVHMPGDAPYCTPELYKECADPALGKKKASSTSDFL
VERDNDFCVCETPCNMTRYSKELSFVKIPSKASAKYLAKKYNKSEQYIKENILVLDIFFE
ALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTILELFDYLYEVIKYKLCRCSDKKH
KHKNNNNNNDQGTVLSLDDVKCHVSNFH
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaagtagaaaccgaagagatggacgcgagtcaacctccgcccgtagaagtt
tttgcgcacagctcgactctgcacggaatctctcacattttcacgtacgagcggttctgc
gtcaaacgctgcttgtgggtcgtgtgcttcttgggctccctgaccttcttgctgttcctg
tgcgtggaccggatccacttctacttcgagtacccgcacgtcaccaaactggacgaggtc
acgaccccgatcatgacgttccccgcggtcaccttttgcaacctgaacgcgtttcggttc
agccgcgtgacgcgcaatgacctgtaccacgcgggggagctgctggccctgctcaaccag
aggtacgagatcagggacatacatcttgtggaggagagtgtcctggagagcctgaaggtc
aaagccgattttcacaacttcaagccgcggcccttcaacatgcgggaattctacgaccgg
accggccacgacatcaacgacatgctgctggcctgccactttcacggcacggagtgccga
gcggaggacttcaaagtggtcttcactcgctacgggaagtgttacacctttaacgccggc
ggcgatggacgtcctcctctctttaccaccaagggcgggatggggaacgggctggagctc
atgctggacattcagcaggatgaatacctgcccatctggggagaaacagatgagacttca
tttgaagccggggtgaaagttcagatccacagtcaggacgagccgtccttcattgaccag
ctcgggttcggcgtggcgcccggcttccagacgtttgtttcctgtcaggagcagaggctg
atatacctccctcctccctggggagactgcaaggtgacggcgatggattcagacttcttt
gacagttacagcatcacagcctgtcgcatcgactgtgaaacgcgctacctggtggacaac
tgcaactgtcgcatggtgcacatgcccggcgacgctccctactgcacgccggagctgtac
aaagaatgtgccgacccggctctcggtaagaaaaaagcttcgtccacgtcggacttcctg
gtggagagagacaacgatttctgtgtgtgcgagacgccgtgcaacatgaccagatacagc
aaagagctgagcttcgtcaagatccccagcaaggcctccgctaaatacctggcaaagaaa
tacaacaagtctgagcagtatattaaagagaacattctggttttagacatcttttttgag
gctctgaactacgaaactattgaacagaagaaagcgtatgaagtggccggacttttaggt
gacatcggtggccagatgggactttttatcggagcgagcatactcaccattctggagctc
tttgactacctttatgaggtgataaagtacaagttgtgtcgctgctccgacaagaagcac
aaacacaagaacaacaacaacaacaacgaccaggggacggtcttgagcctggacgacgtc
aagtgtcacgtcagtaacttccattaa
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