Gasterosteus aculeatus (three-spined stickleback): 120829583
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Entry
120829583 CDS
T07457
Symbol
nbeal1
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120829583 (nbeal1)
Membrane trafficking [BR:
gat04131
]
Endosome - Lysosome transport
Others
Others
120829583 (nbeal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Neurobeachin
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
GRAM
TFIIA
Spt20_SEP
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
120829583
NCBI-ProteinID:
XP_040049778
LinkDB
All DBs
Position
I:complement(26870161..26900834)
Genome browser
AA seq
2840 aa
AA seq
DB search
MASKERLYEVWMLYCTKRDPDYLKLWLEVFISSYEQCLDVDFEKPLSRPEEVPPVLTLLP
DNILQVLRHQLLQCVQKASDGLEPEQQNLALLLLKFLIVICRNLSNVEEIGTCSYINHVI
TMTTLYIQQLKSRTKEKEMADQSQAEEFVRHALAFCESLYDPYRNWRHRTCGEQLGTVER
SRQKYKAAPLTVEFVPFFYQCFQESEHLKESLKCCLLHLFGAIVAGDQRNAQLAISPATM
EVLMRVLADCSMGGCSSDEGEDWDSEAPDHKALLTLGCLREVVQRLLASSSDQRQVEIAS
VLENYFKLLNSDPAAVVASQLQEQQQQQQQQQQQQQKQQQQQQPQVQQAKSRVPTLGRHW
ESRFVALQVNMLDTIRDMFLCSDRPVLQAIFLNSNCFEHLTRLLQNSKLVNARCTAADKD
QKDITNNRLLTGERDTQVSSRFPPQAPSSTCHFLRYTMGPVGMLPRWPGVISQSSEWFKV
LQGRLDSLAVATIKALTTVMHKSPAAKEVFKERIGYNHLYEVLTSLGQPSRRLLKELMNM
AVEGEHTSVGLLGISNVEPLLLLAQWLPELDSSERQLFTADWLRRLSCLNRQTRATCVNA
AMVMRALAGLERHQRLHRACAESLLGLVGSLGSQSLAAGELLGLLRLLRPPESTHVHPYV
GPALRALLAMVRKQGLESAMQYFDLSPSMAGIVVPTVQRWPGSAFSFLAWLSLDQDQLGP
PSKDKRKQLYSFFTPGGTGFEAFISSVGVLVVAVCTKKEYVTVMLPDYCFCDSLWHSIGV
VHVPGKRPFGQSLVYIYVDGQQKLSAPLKYPSMTEPFISCCIGSAGHRTTTPPPSQIPDP
PFSSVITPTTRSSLGAILSPQTWGGLLGGKPESLTKLISAGTQDSEWGSPTSLQGQLGGV
MVFHEPLQPNHMKAICSAGPNCISPFKAQESELGDLSTKLLLHYSPKACRNPICLDLSPN
MLHGRLTGNKVVNWEIKDMINCVGGLPVLFPILEQLTLIIPDQQPSDPAAGSDLITPDVT
TPPDGDWVLLPSNRASEARLEKNLVATFLLVLKHFLQRHPINQDNLLHSHGVGTLGALLQ
KLPAGHVDVSVLVAMQLLIEQVTHEKNQVLLQQLHTHLLFNFNIWNKGDFPLRIGHIQYM
STVIKDNRKQFRKKYGVQFLLDTVRLYYGRGSSNKESDLSEDDVRTIRASLCGLIKYYIS
KGMSQEEMQSILGYVAAIGPEEQLCGMLELLLSLLQTSPARDQLFLLLFEPGAADSCYAL
VLNNKYSDRLRELVFKLFERMLRCDRVYEKNKQRLRLREAGYSGMSLLFSEIHITPTLIR
CLLNQVLHTDHVVNYKDLMALVQLTHRAGPSERLLVCKRVYQLLHSQQDAAIQISKQQCW
QDTLVRLYLRSDGSHPQRSTDTISASSLDLSRGGGTASRLELPLEKRARAGSGGRLEDDR
ISVSDNRSVDSLESGDVLSLLDTPSSSASSEPQPHVKPWAVGKSGGLMLDLSHLQPYEVG
DGGCQTPGSQASTPSPLETSKPFPGSTGERDATSSLTEDSFLFSDNLSLGESFNNAERAE
EELCHMLLEILLCVMWRGVEGSDDSAWLERGQVFSALAKLATANELLLPVDRIKLSLMER
MLEWAVGDNREASAATLPQHTENAVRLLHMVQDFLQAEGLVNPALWTEKVLEETVTLMDS
LMVWYSAGAQWFQLSQVGLRLLLGFMAQEDPEVCALATAKLNGILQTKQVSSQDEACYLL
GKVEGILRRSIQEQREETYCFLVPLLRTLLSKVHRLLFIELHLPQLPDTNGSPSFFEDFQ
LYCDSPEWRVYLDKYIIPYMKQYEIETFSQGHETMALYWKECYEAFMVSLHKRERERGES
KIRFQEQFVEPFSRRGRQENLRYNSMLKQQHSQNSATLRQWKAARRGLVCERGPWADRQQ
DEMHWRVSSAENFSRMRLKLVRNYNFDPHREASALRDNLGVHQKRVNAESLLLEAAKQVK
VSDLEEDILELPEDDPAAANNQIEAEEAGQKEKLVLWEDCELVTVVDVVPGRLELTTQHI
YFYDSSQEKEEGVGHDFKWPLSQIREVHLRRYNLRRSALEIFLIDQTNYFLNFKKEVRNK
VYSRMLLLRSLSLYGTRSPQELLKASGLTQKWVNREISNFDYLMQLNTIAGRTYNNLAQY
PVFPWILADYTSEELDLSDPRVFRDLSKPVAVLNERNAKAVREKYESFEDPTGTIDRFHY
GTHYSNAAGVMHYLIRVEPFTSLHIQLQSGRFDCADRQFHSIPATWQTLMDNPNDVKELI
PEFFYFPEFLENQNGFDLGRLQISKERVNDVILPKWAKSPEDFIYKHRKALESEYVSAHL
HEWIDLIFGYKQRGPAAVEALNVFYYCTYEGAVDLDAITDEKERKALEGMISNFGQTPCQ
LLKEPHPVRLPLEEVEKRKAQLDSCHFSMFEHLSDLKSFFVEGISDNVPLVKAVVPKNQS
HSFITQGSPDTLVTVSQNCLVGTHGWLPYNKNISNYFTFIKDPTVFNAKTQRFLSGPFAP
GVEVTAGLFVASHDGKLLFSGGHWDNSLRVTSLVKGKTVGQHIRHMDIVTCLSTDHCGIH
LISGSKDTTCMVWQVLQQGGAPVGLHPKPVQVLYGHTDEVVSVSISTELDMAVSGSRDGT
VIIHTVRRGHYMRCLRPPCDSSLPLSILHLAVSWEGHLLVHTCLEGKATLKDKNSLHLYS
VNGKHLRSEPLKEQVTDMCVSGEYVVIGSEEGYLSIRDLYSLSLCAEPMAMRVPVRCVSV
TKEQSHVLVGLEDGKLIIVGVGKPAEVKSSLRNYIAQSLEGSPLLASPLLAPLRARSPTR
LLHQRDQLVFSPSSHKPRRL
NT seq
8523 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaggagagactgtacgaggtctggatgctctattgcaccaagagggatccg
gattacctgaagttatggctggaggttttcatcagctcctacgagcaatgcctggatgtg
gactttgaaaagcctctgtcgaggcccgaggaggtgcccccggtgttgacgctcctccct
gacaacatcctgcaggttctgcgccaccagctgctgcagtgcgtccagaaagcttccgac
ggcctggagcccgagcagcagaacctggctctgctgctactcaagttcctcattgtcatc
tgcaggaacctctccaatgtggaggagatcggcacctgctcttacatcaatcatgtcatc
accatgacaacactctacattcaacagctgaagagcaggaccaaagagaaagagatggcg
gaccagagccaggcggaggagtttgtccgtcacgcactagcattttgcgagagcctctac
gacccgtaccgcaactggaggcatcgaacctgcggggagcagctgggcacggtagagagg
agcaggcagaagtacaaggcagctccgctcaccgtggagtttgttcctttcttttaccag
tgcttccaggagagtgagcacctgaaggagagcctgaaatgctgcctactccacctgttt
ggagccattgtagctggtgatcagaggaacgctcagcttgccatctctccagccaccatg
gaggtgttgatgcgggtgctggccgactgctccatggggggctgctcctcggacgagggc
gaggactgggacagcgaggcccccgaccacaaggcgctgctgaccctgggctgcctgcgg
gaggtggtgcagcgcctcctggcctccagctccgaccagcggcaagttgagatcgcctct
gtgctggaaaactacttcaagctgctcaactccgacccggcagccgtcgtagcttcccaa
cttcaagagcagcagcagcagcagcagcagcaacaacaacagcagcaaaaacaacaacaa
caacaacaaccgcaggtgcagcaagcaaagagcagagtgccgacgctgggcagacactgg
gaaagccggtttgtggccctgcaagtaaatatgctagacaccatcagggacatgttcctg
tgttcagaccgtccggttctacaagccattttcctcaacagtaactgtttcgagcatctg
acgcggcttctgcaaaacagcaagctggttaacgcgaggtgcactgcggcagacaaggac
cagaaagatataaccaacaacaggttactgacaggagagagggacactcaggtttcctca
cgctttcccccccaagccccttcctccacatgccattttctgcggtacactatgggtcct
gttggaatgctaccacgttggcctggtgtgatctctcagagttcagagtggttcaaggtg
ttgcaagggcgactagactccctcgccgtggcgaccatcaaagccctgacaacggtgatg
cacaaatcacctgctgcaaaggaagtgttcaaggagaggatcggctacaatcatctgtac
gaagtgctcacctcactcggccagccgtcgcggcgactcctcaaggagctgatgaacatg
gcggtggagggggagcacacttcagtggggctcctgggcatcagcaacgtggagcccttg
ctgctgctggcccagtggctcccggagctggactcgtcggagcggcagctgttcacggcc
gactggctccgccgcctcagctgcctcaaccgccagacccgcgccacctgcgtcaacgcc
gccatggtcatgcgagcgctggcgggcctggagcgccaccagcggctgcaccgggcgtgc
gccgagagtttgctggggctggtgggctcactgggctcccagtcgttggccgccggggag
ctcctgggactccttcgccttctcaggcctccagaatccacgcatgttcacccatatgtg
ggtcccgccctgagggcattactggccatggtgcgcaagcaaggcctggagagcgccatg
cagtactttgacctgtcccccagcatggcgggcattgtggttccgacagtgcagcgctgg
cccggctcggccttcagcttcctcgcctggttgtcgctagaccaggaccagctgggccca
cccagcaaggacaagaggaagcagctctacagcttttttacccctggggggacgggattc
gaggccttcatcagctcagtgggtgtgctggtggtggccgtgtgcaccaagaaagaatac
gtcacagtcatgctgcccgactactgtttctgtgactcgctctggcacagcatcggtgtg
gttcacgtaccgggaaagaggccatttggacagagtcttgtatacatttatgtggatggg
cagcagaaactctccgcccccctcaagtatcccagcatgacagagccattcatttcctgc
tgcatcggctcagcgggccaccggaccaccactccgcctccctctcagatcccggaccct
cccttctcctctgtcatcacccccaccactcgctcctcgctgggcgccatcttgtcgccg
cagacctgggggggcctgttggggggaaagccggagtctctgaccaagctcatctctgca
gggacacaggacagtgagtgggggagtcctacttcgctgcaaggccagttaggaggcgtc
atggtcttccacgaacccctgcagcccaaccacatgaaagccatctgtagtgctggtcca
aattgcatctctccatttaaagcccaggagtctgaactcggtgacctctcaaccaaattg
ctgcttcactactcgcccaaggcgtgtaggaaccccatctgtctcgatctgtctcccaac
atgctgcatggacgcctgactggcaataaagtggtcaactgggaaatcaaggatatgatc
aactgtgtgggcggcctgccggtgctcttccccatcctggagcagctgactctgatcatc
ccggatcaacagcccagtgatcctgccgccgggtcagatttaattactcctgatgtgacc
acgccacccgacggagattgggtccttttgccgtccaacagggcttcagaggcgcgcctg
gagaagaatctggtggccactttcctgttggttctaaagcatttcctgcagaggcatcct
atcaaccaggataatctgctccactcgcatggcgtcggcacactgggagccctgctgcag
aagctgccagcaggtcatgtggacgtcagcgtcctggtcgctatgcagctgctgattgaa
caggtgactcatgagaagaaccaggttctactgcagcagcttcacacacacctgctcttc
aactttaacatctggaacaaaggagacttccctctacgcataggtcatatccagtacatg
tccaccgtcatcaaagacaacaggaagcagttcagaaaaaaatatggagtccagttcctc
ttggacactgtgcgcctttattacgggaggggcagcagcaacaaagagagcgacctcagc
gaggacgacgtccgcaccatccgggcgtctctctgcggcctcatcaaatactacatcagc
aagggcatgtcgcaggaggagatgcaaagcattctgggatacgttgctgccatcggtccc
gaggagcagctgtgtggcatgctggagttgttactcagccttcttcagaccagtcctgcc
agggaccagctcttcctgctcctcttcgagcccggtgccgccgactcctgctacgctctc
gtgctcaacaacaagtactctgatcgactgcgggagctcgtctttaagttgtttgagcgc
atgctgcgctgcgaccgggtctacgagaagaataagcagcgcttgcggctgagggaggcg
ggttactccggcatgtcgctgctcttctccgaaattcacatcactcccacactgatccgc
tgtctcctcaaccaggtcctccatacagatcatgtggtgaactacaaggacctgatggcc
ctggtccagctcactcaccgggccggtcccagcgagcgcctcctcgtctgcaagagggtg
taccagctgctacattcccaacaagacgctgccatccagatctcgaagcagcagtgttgg
caggacaccctcgtgcggctctacctgcgtagcgacgggtcccacccgcagcggagcacc
gacaccatcagcgccagcagcctggacctgagccgcggcggaggcaccgccagccgcctg
gagctgcccctggaaaagagggcgcgggcgggcagtggcggccgcctggaggacgaccgg
attagtgtaagcgacaaccgctcagtggacagcctggagagcggcgacgtcctctcgctg
ctggacacgccatcctcctcggcctcttccgagccgcagccgcacgtcaagccctgggcg
gtggggaagtcgggcggcttgatgctggatctgtcccacctgcagccctacgaggtcggg
gacggcggctgtcaaacacccggcagccaggccagcacgccgtcgccgctggagacttct
aagcctttcccagggagcaccggagagcgcgacgcgacctcgtccctgacggaggacagc
tttctcttcagcgacaacctctcgttgggagagtccttcaacaacgccgagcgggcggag
gaggagctgtgccacatgctgctggagatcttgctgtgcgtgatgtggcgcggggtcgaa
ggctcggacgactcggcgtggctggagcgtggccaggtcttctctgccctcgccaagctg
gcgaccgccaacgagctgctgctgcccgtcgaccgaatcaagctgagtctcatggaacgc
atgttggagtgggcggtgggtgataaccgcgaggcgtccgccgccaccttgccgcagcac
acggagaacgcggtgcgtttgcttcacatggtgcaggacttcctgcaggcggagggccta
gtcaacccggcgctgtggacggagaaggtgctggaggagacggtgaccctgatggacagc
ctcatggtgtggtactcggccggcgctcagtggttccagctctcccaagtcggactgcgg
ctgctgctgggcttcatggcgcaggaggaccctgaagtgtgtgccttggccacagccaag
ctcaacggcatcctgcagaccaagcaggtgtccagccaggacgaggcctgctacctcctg
ggtaaggtggagggcatcctgcggcgctccatccaggagcaaagggaggagacgtactgc
ttccttgtccccctgctgcgaacgctgctctccaaagtccaccgcctcctcttcatcgag
ctgcacctcccccagctccccgacaccaacggcagcccgtccttcttcgaggacttccag
ctgtactgcgactccccagagtggcgggtctacctcgacaaatatatcatcccgtacatg
aagcagtatgaaattgagacattcagccagggccacgagaccatggctctctactggaag
gagtgctacgaggcgttcatggtcagcctgcataagagagagagggagaggggtgagagc
aagatccgcttccaggagcaatttgtggagcctttctcacgcagagggcggcaggagaat
ctgcgctacaacagcatgttgaagcagcagcacagccagaacagcgccaccctcaggcag
tggaaggcagcacgtcgagggctggtgtgtgagagaggaccctgggctgacaggcagcag
gacgaaatgcactggcgcgtgtccagcgcagagaacttctcccgcatgaggctgaagctg
gtgcgcaattacaattttgacccacacagagaagccagcgctctgagagacaacctgggt
gttcatcagaagcgggtcaacgcagagtctctgctactggaggcagcgaagcaggtcaaa
gtcagcgacctggaagaagacatcctggagctgccagaggacgacccggccgccgccaac
aaccaaattgaagcagaggaggcgggccagaaggagaagcttgtgctgtgggaggactgc
gagctggtgacggtggtggacgtggtgcccggccgcctggagctcaccacccaacacatc
tacttctacgacagcagccaggagaaagaggaaggagtgggccacgactttaaatggccc
ctgtcccagattagagaggtccaccttcgacgttataatctacgccgctccgctctggag
atcttcctcatcgaccagaccaactacttcctcaacttcaagaaggaggtgaggaacaag
gtctatagccgcatgctgctgctgcgatccctcagcctctatggaacccgctcaccccag
gagctcctcaaagcctctggacttacacagaaatgggtgaaccgggagatttccaacttc
gactacttgatgcaactcaacacgattgcaggcagaacgtacaacaacctggctcagtat
ccagtgtttccctggattctagctgactacacttcagaggagctggacctatctgatccc
cgcgtattcagggacctatcgaagccagtggcggttctcaacgaacgcaatgcgaaggct
gttagagagaagtatgaaagtttcgaggacccaaccggcaccatcgacaggttccattat
ggcacccactactccaacgctgccggggtgatgcactacttgatcagggtggagcccttc
acgtctctgcacatccaactgcagagcggacgatttgactgtgccgaccgccagttccac
tccatccccgccacatggcagaccctcatggacaacccgaacgacgtcaaagagctcatc
cccgagttcttctacttcccagaattccttgagaaccaaaacggcttcgatctgggtcgc
ctgcagatctccaaggaaagggtaaacgatgtcattctgcccaaatgggccaagtcccct
gaggacttcatctacaaacaccgcaaagccctggagtcagagtacgtgtcggctcacctt
cacgagtggatcgatctcatcttcggttacaagcagaggggccccgcggcggtggaggcc
ctcaacgtcttctactattgcacatatgagggagcggtcgacctggatgccattacagac
gaaaaggagcgcaaggccctggagggcatgatcagcaactttggacagacgccctgccag
ctcctcaaggagcctcatccagtgcgactgcctctggaggaagtggagaaaaggaaggct
cagcttgactcgtgtcatttcagcatgttcgaacacctcagcgacctcaagtccttcttt
gttgagggcatcagtgacaacgtgccgctggttaaggccgtggtgccaaagaatcagtcc
cattctttcatcacccagggaagccctgacaccttggtcacggtgagtcagaactgcttg
gtcgggacccacgggtggctgccttacaacaagaacatctccaactactttaccttcatc
aaggaccccaccgtgttcaacgccaagacccagcgtttcctctccggaccgtttgccccc
ggcgtggaggtaaccgctgggctctttgtggcctcccacgacggcaagctgctcttcagc
ggtggccactgggacaacagcctgcgggtcacctccctggttaagggcaagactgtggga
cagcacatccggcacatggacattgtgacctgcttgtcaacagaccactgcggcatccac
ctgatctccggctccaaagacacaacctgcatggtgtggcaggttctgcagcagggtgga
gctcctgtgggtcttcatcccaaaccggttcaggtgttgtatggacacacggacgaggtg
gtcagtgtcagcatcagcacagaactggacatggctgtttccggatcacgggacgggacg
gtgatcatccacacggtgcgtcggggccactacatgcgttgcctgcggccgccgtgcgat
agctccctgccgctctccatactccacctcgccgtttcctgggagggtcacctgctggtc
cacacctgcctcgaaggcaaagcaacgctcaaggataaaaattccctccacctttactcc
gtcaatgggaagcacctccgcagcgagcctctgaaggagcaggtgaccgacatgtgtgtt
tctggggagtatgtggtcatcggcagcgaggagggatacctctccatccgcgacctctac
agcctgtctctgtgcgcggagcccatggccatgagggtgcctgtccgctgcgtctcggtc
accaaggagcagagccacgtcctggtgggcctggaggacggcaagctgatcatcgtgggc
gtgggcaagccggcggaggtaaagagctcgctgaggaactacatcgctcagagcctggag
ggatcgccgctcctggcctcccccctgctggccccgctccgggcccgctcgccgacccgc
ctgctacaccagcgcgaccagctggtgttcagccccagctcccataaacccaggcggctc
tag
DBGET
integrated database retrieval system