Gasterosteus aculeatus (three-spined stickleback): 120829590
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Entry
120829590 CDS
T07457
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120829590 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120829590 (ogg1)
Enzymes [BR:
gat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120829590 (ogg1)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120829590 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Mlh1_C
Motif
Other DBs
NCBI-GeneID:
120829590
NCBI-ProteinID:
XP_040049784
UniProt:
A0AAQ4QUN3
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All DBs
Position
XII:1759427..1761897
Genome browser
AA seq
417 aa
AA seq
DB search
MAEHALLLPVGNMWRYLACAKSELRLDLTLACGQSFRWRETAEGHWTGVMGGRVWTLSQT
DEALRYHVHRSSGGRGEPAGPRERRAGVPLHTEGSSGGSSAGAVNEEEEEEEEEEDDEEE
EPVTEDTDEEAEMLRDYFQLNVSLGDLYQQWGAADPHFQRIAASFPGVRVLRQDPTECLF
SIICTANNHISRIHGMVDRLCQALGAPLGTLDGTSYHDFPSLSALAGGGVEARLRDLGFG
YRAPFLQRSAAQILAADGPRWLEGLRAAPYAEAHEALCALPGVGAKVANCVCLMSLDKAE
AVPVDTHVWQIAKRDYGYTAGKAPKSITNKLQRDLGVFFRTLWGPRAGWAQSVRFCAELK
KFQPLRETAQLKKEDEDEDEDKKEVTVAREGAKAEGSGNAKGGRNKPARHKKAKTSA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacacgcgctgctgctgccggtgggaaacatgtggcgatatctggcctgcgcc
aagtccgagctgcgtctggatctcactctcgcctgcggacaatccttccgctggagggaa
accgcagaagggcactggaccggagtgatgggagggcgcgtctggactctgagccagacg
gacgaggctctccggtaccacgtccacaggagctcaggcgggcgaggagagccggcgggg
ccccgggagaggagagcgggtgttcccctccacacggaagggtcgtcaggggggagctcc
gcaggagctgtgaatgaggaggaggaggaggaggaggaggaggaggatgatgaggaggag
gagccggtgaccgaggacaccgatgaggaagcggagatgctgagggactacttccagctg
aacgtcagtctgggggatctgtaccagcagtggggagcagcagacccccacttccagcgc
atcgcagcctccttcccaggcgtgcgagtgcttcgccaggaccccaccgagtgtctgttc
tccatcatctgcaccgccaacaaccacatctcccgtatacacggcatggtggacaggctg
tgtcaggctctgggcgccccgctgggcacgctggacggaacctcttaccacgacttcccc
tccctgtctgcgctcgctggcggcggcgtggaggcccgtctgagggatctgggtttcgga
tacagggctccgttcctccagcggagcgcagcgcagatcctggccgccgacgggccccgg
tggctcgagggtctccgggccgccccgtacgcggaggcgcacgaggccctgtgcgctctc
cccggcgtgggcgccaaggtggcgaactgcgtgtgtctgatgtccctggacaaggccgag
gccgtgcccgtggacacgcacgtgtggcagatcgccaagcgggactacggatacacggcc
ggcaaagcaccgaagagcatcaccaacaaactgcaacgggacctcggggtgttcttcagg
acgctgtggggtcctcgcgccggttgggcgcagtcggtgcggttctgtgccgaactcaag
aagttccaaccgctgagggaaacggcgcagctgaagaaagaggacgaggacgaggacgag
gacaagaaggaggtgacggtagctcgcgagggcgcgaaggccgagggaagtggaaatgcg
aagggagggaggaacaagccggcgcgtcacaagaaagcgaagacgtcggcctga
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