Gasterosteus aculeatus (three-spined stickleback): 120829620
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Entry
120829620 CDS
T07457
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120829620
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120829620
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
120829620
NCBI-ProteinID:
XP_040049840
UniProt:
A0AAQ4S0U9
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Position
I:26847499..26858433
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AA seq
947 aa
AA seq
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MGQKDHVEAGAGHILDLELDLEYLHVAGFNRQAGGSDGPPAMEEQGERSADSPPPAAAEE
NPGSDAERQPPAASSAPLAADPDPDGGEGGLTPSKNAHQPLCRTPCVDLGTEGPPELPAE
LSSELEHEASPASPCKRPPEPPHKPSSSEPAPEAGGKEYRAKLEFALKLGYSEDTVLLVL
SKLGPDTLINDILGELVKLGTKSDSEQPAGSLASTSSTSSSSSSCGYSDLLDSQRSDSPC
PSDSLSDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHHDVTVFVPAWRK
EQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSND
NYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSVDNFLRKRPVMPEQKKQ
PCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKTQGDTGLVKSHSVPAG
SFEAKKGAQKRQSDPSIRALSYGDAEEKLAKGRAESQKNNNSSGGGGGMSMSSASGDPLI
SFSLPPDQQSRTVTPHSLPGPSHDLYPHCESPDLSYYSVTRAYSGLSLSSRRSPDCRFPN
DTDMRLGSVGSAGSECGSESSASCGSGSCDSYGERPCAGCPPETSLDDGLHFANPHSRLY
PHRAAPNHELCGLHPADYSSAQHAANAGAHGYHPSAPRGPNCARDQPPPKQPLYPLPPHL
QHQPLAARSSCPGDYHSLPQSNPHAPGSPLGRCLAPTRRESVSDSHLYEHLSTQHHRHRT
KALPGWDTYYRQPPLPPSRYEPSAYQSLPDTRQASWHAPPWAQDGYGQHHSSHPALHPSS
AHYLNHPPPQARSPHPPHPPGAPLPPPYASHSAHHAAPSHAPPSYMPQHPESPAHSRYVD
MREKVYADLCNIFPSELVRRVMARSPHITDPQQLAAAILSEKAQTGY
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcgggagcgggccacatcctcgacctggagctggat
ttggagtatcttcacgtagcggggttcaaccggcaggctggcggctctgacgggcccccc
gctatggaggagcagggggagcgctctgcagattcccctccccccgctgcggcggaagaa
aaccccgggtccgatgcagagcgccaaccgccggcggcttccagcgcccccctcgccgcc
gaccccgacccggacggaggagagggagggttaactcccagtaagaacgcccaccagccc
ctttgtaggaccccatgtgtggacttgggcactgagggtcctcctgagctcccggctgag
ctctcgtcggagctcgagcacgaggcgtcgcccgcctcgccatgcaagcgccccccagag
cctccccacaaaccctcctcctcggagccggcgcccgaggccggcggcaaggagtaccgg
gcaaagctggagtttgccctgaagctgggctactcggaggatacggtgctcctggtgctc
tccaagctcggccctgacaccctcatcaatgacattctgggagagctggtcaaactgggc
accaagtcggacagcgagcagccggccggatcgctggcctccacctcgtccacgtcctcg
tcctcctcctcttgtggctactctgatctgctggacagccagaggtcggactcgccctgt
ccgtcagactctctgagtgaccaggacaacctgcgcccgatcgtggtggatggcagcaac
gtagccatgagccatggcaacaaagaggtgttttcctgccagggcatccagctggctgtg
gattggttcctagagcgaggtcatcatgacgtcacggtgtttgtgcccgcttggaggaaa
gagcagtcgcgccctgacgccccgataacggatcaggagatcctgcgtcgcctggagaaa
gaaaagatcctggtcttcactccttcgcggcgtgtccaaggtcggcgcgtggtttgctat
gacgaccgcttcatcgtcaagctcgcctacgagtcagacggcatcatcgtctccaatgac
aactaccgagacttggctaacgagaagcccgagtggaagaagttcatcgatgagcggctg
ctcatgtattccttcgtcaatgacaaattcatgcccccagatgaccctctaggtcgtcat
ggccccagcgttgataacttcctgaggaaaaggccggtcatgcccgagcagaagaaacag
ccttgcccatacggaaagaagtgcacttacggccacaagtgtaagtactaccacccagaa
agaggtgctcagcctcagcgagctgtggccgacgagctgcgtgccagtgccaagacctgt
gtcaccacaaagacccagggggacaccggcttggtgaagagccacagcgtgccagctggc
agctttgaggccaaaaagggcgcccagaaacggcagtcggaccccagcatccgagccctg
tcgtacggtgatgccgaggagaagctggccaaagggagggcggaaagtcagaagaacaac
aacagcagcggcgggggcggaggcatgagcatgtcctcggcctcaggagaccctctgatt
agtttcagccttcccccggaccagcagtccagaacagtgactccccatagtctaccgggc
cccagccacgacctttaccctcactgtgagtcccccgacctgagctactactcggtgacg
cgtgcctactcgggcctgagcctctcctccagacgcagcccggactgccgcttccccaac
gacacggacatgcggctcggctccgtgggctcggcgggctccgagtgcggcagcgagagc
agcgcgagctgcggcagcggcagctgcgactcgtacggcgagaggccgtgcgccgggtgc
cccccggagacctcgctggacgacggcctccatttcgccaatccccacagccggctgtat
ccgcaccgcgcggcgcccaaccacgagctctgtggcctccatcccgccgattactccagc
gcgcagcacgcggccaacgcgggggcgcacggctaccacccgagcgcgccgcgcggaccg
aactgcgctcgcgatcagcctcctcccaagcagcccctctacccgctgcccccgcacctc
cagcaccagccgctggccgcgcgctccagctgcccgggcgattaccactccctgccccag
tccaacccgcacgcccccgggtctcccctgggccgctgcctggcgccgacgcgccgggag
agtgtgtccgactcgcacctctacgagcacctgtccacgcagcaccatcgccaccgcacc
aaagctttgcccggctgggacacgtactaccggcagcctccgctgccgccgtcccggtac
gagccgtccgcctatcagagtctgccggacacgcggcaggcgtcctggcacgcccctccc
tgggcacaggacggctacggccagcaccactcctcccacccggctctccacccgtcctcg
gcgcattacttaaaccacccgccgccccaagcccgctcgcctcacccgcctcatccaccc
ggcgctcctctcccgccgccgtacgcgtcccacagcgctcaccacgcggcgccgtcacac
gccccgccctcttacatgccgcagcacccagaatcgcctgcgcacagccgctacgtggac
atgcgggagaaagtgtacgccgacctgtgtaacatcttcccctcggagctggtgaggcgc
gtgatggcccggagcccccacatcacggacccccagcagctggcagccgccatactttca
gagaaagcccaaacgggatactga
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