Gasterosteus aculeatus (three-spined stickleback): 120829621
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Entry
120829621 CDS
T07457
Name
(RefSeq) nuclear receptor subfamily 1 group D member 1-like
KO
K03728
nuclear receptor subfamily 1 group D member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120829621
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120829621
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120829621
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1D. Rev-Erb
120829621
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
120829621
NCBI-ProteinID:
XP_040049836
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All DBs
Position
12:9439094..9448704
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AA seq
566 aa
AA seq
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MDNSPGGGVILYAGSSGSSSPGPGSPSSGYQTQSPCSHSQPSSPEEVTFTEIGAFKHRAS
GSATSPPKLIFQFPEIYSASRTPAAPQNTYAHPIAGKRPCGFTGTFTKTGGMVLLCKVCG
DIASGFHYGVHACEGCKGFFRRSIQQNINYKMCVKNENCLIMRMNRNRCQHCRFKKCLSV
GMSRDAVRFGRIPKREKQRLLDEMQSYMNSLNESVAMESPPARETPSSPEEGHSKEAIGA
ISRAYRDIFTSSNSRKRAAKTDDITSPFPQGASFPRVLSHPTSTLSYNSCPVASATPRPV
APHDDQPAFLNGDNSCYPYFTSTNHSHDQSNGATSTRGCSANRNSFCNAGSSPNQPTCPW
KLASGAKVLACPLNAWPVSGAGRTSQEIWESFSQCFTPAVKEVVEFAKGIPGFQELSQQD
QVLLLKSGTFQVLMVRFCTLFKADERTVTFLNGQTYPLPTLRALGMGSLLDAMFNFNEKL
GALWLEPDEMALFMAVVLVSADRFGIKDMQAVEQLQEGLIRALRSLITLRRPEDTTLFPK
VLLCLPDLRTLNNLHSDKLLAFRIDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggataacagccccggtggtggagtcatcctgtatgcgggctcctccggcagttcgagc
cccggccccggcagcccctccagcgggtaccagacacagtccccttgttcgcactcccag
ccctcgtccccggaggaggttaccttcacagagatcggggcgtttaaacacagggcgtct
gggagcgccacctctccccccaagctgatatttcagttccctgagatctacagcgcctcc
cggacgccagccgccccgcagaacacctatgcgcaccccatcgcaggaaagaggccatgc
ggtttcacaggaacgttcacaaagacggggggaatggttctgctttgcaaagtctgcgga
gacattgcttccggtttccactatggagtgcacgcgtgtgaaggttgcaagggtttcttc
cgccgcagcatccagcagaacatcaactacaagatgtgtgtcaagaatgaaaactgtctg
atcatgcgcatgaaccgcaaccggtgccagcactgtcgcttcaagaaatgcctctctgtt
ggcatgtcaagagacgctgtacgtttcggccgcatccccaagagagagaagcagcgactt
ctggatgagatgcaaagctacatgaacagcctgaatgagtcggtggccatggagtcacct
ccagcgagggagactcccagtagcccagaagagggccactcaaaggaggccattggggcc
atctccagagcctaccgtgacatcttcaccagcagcaacagccgcaagagagcggccaag
accgacgatatcacatctccctttcctcagggtgccagttttccccgagtcctctctcac
cccacctccaccctcagttataactcttgccccgttgcgtctgccactccacgccccgtt
gcccctcatgacgaccaacctgcattcctcaacggggacaacagttgctacccctacttc
acatcaacaaatcacagccatgatcagtccaacggtgcaacctctacaagaggatgttcg
gccaatcggaacagtttttgcaatgcaggaagttccccaaatcagcccacctgcccatgg
aaattagcttcaggagcaaaagtgttggcctgtccgctcaatgcgtggccggtatcaggg
gcggggcgcacgagtcaggagatatgggaatccttctcgcagtgtttcactccggctgtc
aaggaggtggtagagtttgccaagggcatcccaggatttcaggagcttagccaacaagac
caggtcctgctgctgaagtccggcaccttccaggtgctgatggttaggttctgcaccctg
ttcaaggctgacgagcgtacagtaactttcctgaacggccaaacttacccgctgcccacc
ttgcgggccctgggcatgggctctctgctggacgcaatgttcaacttcaacgagaagctg
ggcgccttgtggctggagcctgatgaaatggccctctttatggccgtggtgctggtctct
gcagatcgtttcggcatcaaagacatgcaggctgtggagcagctgcaggaaggtctgatc
cgtgcccttcggtcactgatcactctgcgccgcccagaagacaccactctcttccccaaa
gtccttctctgcttgcccgacctgcgcaccctcaacaatctgcactcagacaagctgtta
gcctttcgcatcgacccttga
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