Gasterosteus aculeatus (three-spined stickleback): 120829685
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Entry
120829685 CDS
T07457
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120829685
Spliceosome [BR:
gat03041
]
Common components
Common spliceosomal components
General mRNP proteins
120829685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
120829685
NCBI-ProteinID:
XP_040049947
UniProt:
G3NEB5
LinkDB
All DBs
Position
XII:complement(1536210..1542189)
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AA seq
512 aa
AA seq
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MADDFDVEAMLEAPFRKDEIKSSHANGHNEQNKKKRRSRSKSRSPGSRKRRSRSKDKKKS
KKRSKSRERKRSRSRERHRSGSRSKERSGRYRARKSPVRKRSKSRSPFKKEKSPIRNFED
AIGPFNKVREQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRN
SRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGP
MRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALE
QLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGL
KIPPAAQQALQMTGSIPFGNISAPPSLPTPSQSQAMNLPSQPLATHCLQLSNLFNPQAEN
DLTWAVEIQDDVIEECNKHGGIVHIYVDKNSAQGNVYVKCPSIPAAMATVNALHGRWFAG
KMITAAYVPLPTYHNLFPDSVTAKQLLMPARR
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtcgaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaatggacacaacgagcaaaataagaaaaaaaggaggagtcgaagc
aaaagccgaagccccggctctaggaagcgaaggagccgaagcaaagacaaaaagaagagc
aagaagaggagcaagagccgagaaaggaagcgaagccgcagcagagagcgccatcgcagc
ggctcccggagcaaggagcgctcgggccgctacagagcacgcaagagccccgtccggaaa
cgttcaaaaagtaggagcccctttaaaaaagagaagagtcccatcagaaactttgaagat
gctatcgggccgtttaacaaagtcagggagcaaccgattgacaacctcaccccggaggag
agggatgctcgcacagttttctgcatgcagctcgctgcacgaatccgagcccgagaccta
gaggacttcttctccgctgtgggaaaagttagagatgtccggatgatctccgacagaaac
tcccggaggtcaaagggcatcgcgtacatagagttcgtggagtcttcctccgtgccgctg
gccatcgggctgaccggccagaggctcctcggcgttcccatcatcgtccaggcctcgcag
gcggagaaaaacagagcggcagcggctgccaacaatctgcagaagggcagctcgggcccg
atgcggctctacgtgggctcgctgcacttcaacatcacggaagaaatgctccgagggatc
tttgagcctttcgggaagatcgagggcatccagctgatgatggacagcgagacgggccgg
tccaaaggatacggcttcatatcgttcgcagacgccgaatgcgccaagaaggccttggag
cagctgaacggctttgagctggcgggccggcccatgaaagtgggtcacgtgacggagcgc
tcggactcctccacggccagctccttcctggacaacgacgagctggagcggaccggcatc
gacctcggcaccactggccgcctgcagctcatggcccggctagcagaaggaaccggcctg
aagatcccccccgctgctcagcaggctctacagatgaccggctccattccctttgggaac
atctctgctccaccatctctcccgactccgtctcagagccaagcgatgaacctcccgtct
cagccgctggccacacactgcctgcagctgtccaacctcttcaacccgcaggcggagaac
gatctgacctgggctgtggagatccaggacgacgtgatcgaggagtgcaacaaacacgga
ggaatcgttcacatttacgtcgacaagaactctgctcaaggcaacgtgtacgtgaagtgt
ccctcgataccagcggcgatggcgactgtgaacgctcttcacggacgctggtttgcaggt
aaaatgataacggcggcttacgtcccgctcccgacgtaccacaaccttttccccgactcg
gtgacggcgaagcagctcctgatgccggcgcgccggtag
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