Gasterosteus aculeatus (three-spined stickleback): 120829799
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Entry
120829799 CDS
T07457
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130 isoform X1
KO
K06545
CD163 antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gat04090
]
120829799
CD molecules [BR:
gat04090
]
Proteins
120829799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
TMEM154
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
120829799
NCBI-ProteinID:
XP_040050186
LinkDB
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Position
XII:17546523..17558307
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AA seq
1337 aa
AA seq
DB search
MSRAVATMWLLLLLCCSHHQLLIAQADDRTVLMNWNNPCEGYVGIIHDGQLGYVGSTNWN
DAASKVVCSSIQCGNPVKSQRMTPPWPFDKFWINEVNCTGEEAQLWKCKFPGFGVSHHQK
DSLRYIQCSHEIELSLDGFECAGDVQYSVNGGKTYSGYICADGWEKKDADVLCKSLKCGT
AKEIVTQQWLGWKGFRQKNKMMVKCSGIENVTHLWQCAVGERSSCQKPASVICTGHEAVQ
LRGNTSNVCSGQLYKEESGKWTPFQNNITDPDKWCQQMHCGTSSDLNGTDLTCSDNVKVV
LKHNNTLSKCYGTVYVQVNDTMVQPVCGSSWDRKEAAVVCKELGCGKVHQHSTWTNKQTK
GIMDNVRCSGEETSLWQCRAKRDHAPFQCPSNVYVVCTGSIGVRLKDGPGKCCGRVEIQH
EGTWKRVSKKGWTNQNSETVCKLLDCGHKRENLKEFSQGSAEFLNGTLQCPKNNVAHISE
CIKHNVTLEKKAMAMAITCEEHKVVFLKGNKPCSGMVGIEQDTKTYWLSGSNWTWNVESA
NTVCQQMHCGNASNHMHINNTNEGKSIWKDSYSCSSNTKSLFDCQKTQNLSSDHEDTIAY
VTCSGKITANLTNGCWGNVNVCLGKKCGGVCSDGWGNSKAVMLCEDLGCGNSVLKATSTP
KESQVIMKSVHSTTETTNMTQCNFVTRDENDINYKCSPAYVVCSGSIKTKFSKLNEKCSG
SVEMLYEGKWIPVCANALKDKNVQDTICGELKCGQASKLIDYFGPAGQGPFISEINCFEN
GNKLLAACNMTSQKDACKPGVLQCSDWRKMALTVGSACKGAATVLSEGKRSPIFFESWTE
RMGNMLCKHLGCGRLKRNESKYVLQSPTTTNFNCATVNDSESLWDCGSSNMESQSKQQLF
IECQDEPQIILSEGCYGEVKINNLEVCATNWKENYSDMVCSEINCGGNAVASVSHDRMPQ
RNKDYHHVRCDDNDYYLGQCKRFKGKCDGNLVSVYCVGNVKFNTTEKCGGQIEVQYRDKW
EKVCSGAPLGSEHLKKLCKEMNCGGHSGIQSKDNNDKVKSHLETTLKCGNENLDIKYCLH
KELCETSKPAEIYCNGYEVPPTEPPKIVANPLWPKMMAVGLVLVVVILIVVLLRICKVKR
AKKGQNVSPGRLSSKEDGFESGSYDEVMSKSNEMAELNRTRFRSETEVFAGNDAGSTSFE
YDDIDEVAVVQPLTSGADTAGASGFRSETEVFAGNDAGSTSSFAYDDIDEVAVVQPLTSQ
ADTTGASGSDSIQDGVTFEVYDQEENYDDVEACSGIIQTEAEIHAATQPATESDAAAPAG
SELGDDNYMQPRRVSQS
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagctgtggccaccatgtggctcctcctcctcctctgctgctctcaccatcag
ctgctgatcgctcaagctgacgacaggacggttctgatgaattggaacaacccatgtgag
ggctacgtcgggatcattcatgatggccaactgggctacgttgggagtacaaactggaac
gacgcagcatcaaaagtggtgtgcagcagtattcaatgcgggaaccccgtaaagagccag
cgcatgactcctccgtggccctttgacaaattctggatcaacgaggtgaactgcacggga
gaagaggcccagctgtggaagtgcaagttcccgggcttcggcgtcagccaccaccaaaag
gactcgctgcgatacatccaatgttcacatgaaatcgaactaagcctggacggatttgaa
tgcgcgggagatgtgcagtactccgttaatggggggaaaacgtattcgggttacatttgt
gctgacggctgggaaaaaaaggacgccgacgttttgtgcaaatccctcaaatgcggcaca
gccaaggagattgttactcagcaatggttgggttggaagggattcagacaaaaaaacaag
atgatggtcaagtgttcgggcattgaaaatgtcactcatctgtggcagtgtgccgtgggg
gaaagatcatcgtgccagaagccggcttctgtcatatgcacaggtcacgaggcagtgcaa
ctccgaggaaacacgtctaatgtctgttccgggcagctgtataaagaggagagtggcaag
tggaccccgtttcaaaacaacataaccgaccccgataagtggtgccaacaaatgcactgc
ggcacaagcagcgatctcaatggcacagatctgacatgttcagacaatgttaaagtagtt
ctgaagcacaataacaccctcagcaagtgctacggtacagtgtatgtccaagtgaatgat
acaatggtacaacccgtgtgcggctcctcttgggaccgcaaggaagctgcagtggtttgc
aaggagcttggctgtgggaaggtgcatcaacatagcacatggacaaacaaacaaacaaag
ggaataatggacaatgtgcggtgctcaggcgaggaaacctcactgtggcagtgtagagcc
aagcgtgaccacgcgccctttcaatgtccttctaacgtctacgtagtctgtacaggtagt
ataggagtgagattgaaggatggtcctggaaaatgttgtgggagagtggagatccagcat
gagggcacatggaaaagggttagcaagaaaggatggaccaatcaaaactctgagacggtg
tgcaaactattggactgtgggcataaaagagagaatctgaaagaatttagccagggttcg
gctgaatttctgaatggcactctacaatgtccaaagaacaacgtcgcacacatatctgag
tgtattaaacacaacgtgacgcttgagaagaaggcaatggcgatggcaataacctgtgag
gagcacaaggtggtttttctgaagggaaataagccctgttctggcatggtggggatagag
caagacaccaaaacctactggctctcaggctccaactggacatggaacgtggagtctgca
aacactgtctgtcagcaaatgcactgtgggaatgcatcaaaccatatgcatatcaacaac
actaatgagggaaaatccatctggaaggattcttacagctgctcatccaacaccaaatcc
ctgtttgactgtcaaaaaacccaaaacctgtcatctgaccatgaagacacgattgcctat
gtcacatgctcaggaaaaattacagcaaacctgaccaatgggtgttggggcaatgtcaac
gtttgtttggggaagaagtgcggaggggtgtgttccgacggctggggaaactccaaggcg
gttatgctgtgtgaagatctgggctgtgggaacagcgtccttaaggccaccagcacgcct
aaagaaagccaggtgatcatgaaaagtgtgcactcaacaacggagaccaccaacatgacc
cagtgcaacttcgtcacacgtgatgaaaatgacatcaactataaatgtagtccagcctat
gttgtctgttcaggtagcataaaaaccaaattcagtaagttaaatgagaaatgttctgga
agtgtggagatgctctatgaaggcaagtggatcccagtttgcgccaatgctcttaaagat
aaaaacgtacaagacaccatctgtggagagctgaaatgtggtcaagcctccaaactcatc
gactacttcggaccagcgggacagggtcccttcatttcagaaatcaactgttttgaaaat
ggcaacaagttattagcagcatgtaatatgacgtctcaaaaggacgcctgcaaacctggt
gtcctccaatgttccgactggagaaagatggcactgactgttggcagcgcctgtaaagga
gctgcaacagttctctctgaggggaaaaggagtcccattttcttcgagagctggacagaa
aggatgggaaacatgctttgtaagcatttgggatgtggcagattgaagcgcaacgaaagc
aaatatgttttgcaatcccccacaaccacaaacttcaactgtgcaactgtaaatgattca
gaaagcctctgggactgtggaagttcgaacatggaaagccaatcaaaacagcagcttttt
attgaatgccaagacgaaccccaaatcatcctttcagagggatgttacggtgaagtgaag
ataaacaacctcgaggtgtgcgctacgaactggaaggagaactactccgatatggtttgc
agcgagataaactgtggaggaaacgctgttgctagtgtctcccatgatagaatgcctcag
cgaaataaggactaccaccatgtgcgttgtgatgacaacgattattaccttggccagtgc
aagagattcaaaggaaagtgtgatggaaatctggtgtctgtttactgtgtcggtaatgtg
aagttcaacaccacagaaaaatgtggtggtcagattgaagttcaatatcgagacaagtgg
gaaaaagtgtgttccggggcgcctcttggctcagaacatttgaaaaagctgtgtaaagag
atgaattgtggtggccacagtgggatccagagcaaagacaacaacgacaaggtcaagtcg
catttggaaacaacactgaaatgcggcaatgagaacctggacatcaagtactgcctccac
aaagagctttgtgagactagtaaacctgctgagatctactgcaacgggtatgaggtccca
ccaaccgagccacccaaaatagtcgcgaaccccctatggccgaaaatgatggcggtggga
ctcgttctggttgtggtgatattgattgtcgtgttgctacgaatctgcaaggtaaaaaga
gccaagaaaggccagaatgtgtcacctggaaggttgtcaagtaaagaagatggttttgaa
agtggcagctatgatgaagtgatgagcaaatcaaatgaaatggcggaactgaatcgcacg
agattcagatccgagactgaagtcttcgcgggcaacgacgcgggcagcacctcatttgag
tacgacgacatcgacgaagtggccgtggttcagccgctgacctcgggggccgacaccgca
ggggcctcaggattcagatccgagactgaagtcttcgcgggcaacgacgcgggcagcact
tcctcatttgcatacgatgacatcgacgaagtggccgtggttcagccgctgacctcgcag
gccgacaccacaggggcctcaggtagcgactccatccaagatggggtgactttcgaggtg
tatgaccaggaggagaactatgacgacgtcgaggcctgctcgggaatcattcagactgag
gccgaaatccatgccgccacccaacccgccaccgaaagcgacgcagcggcgcctgcagga
tcggagctgggggatgacaactacatgcagccaaggcgggtgagccaaagctga
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