Gasterosteus aculeatus (three-spined stickleback): 120829864
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Entry
120829864 CDS
T07457
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120829864 (nsun5)
Enzymes [BR:
gat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
120829864 (nsun5)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Other ribosome biogenesis factors
120829864 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Phage_Treg
WHD_PARP12
Motif
Other DBs
NCBI-GeneID:
120829864
NCBI-ProteinID:
XP_040050336
UniProt:
G3NRN5
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All DBs
Position
XII:13408310..13411152
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AA seq
540 aa
AA seq
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MALYMKAAEILEKVEAKQGALKTLVYDSRFPHIKQLFALVCETQKFSAVLEEIIESTKLL
KQTKLGINLAKVLVYDLLIGRGLKCGGSWKTAMMKHRARMQAALARMKVKQKVSRNEDLL
PQSAQKLVGDQLPRYVRVNTLKTTAEDAVDYLKRDGFCYLGQAGRLEDLSLKRKDFVRDM
LVPELLVFPPKTEFHEHFLYKAGHVILQDKASCLPAYLLNPPPGSHVIDACAAPGNKTSH
LAALMENRGKLFAFDLDAKRLATMSTLLLRAGVTCQQLAHQDFLKVDPDGPQFKDVEYIL
LDPSCSGSGMVCLRDDASSADQEKVQARLASLASFQLLCLNHGLKFSRLKRLVYSTCSIH
SQENEEVVAACLQQNPDFRLVPLLAQWPERGLEPLTQCLRASTTKTRTHGFFVALLERHT
GAGSKRPALQMSVPEAMPLKPTTGDKRPGASDEKRPGASEEKRPGASEEKRPGASEEKRP
GALEGKASEALEDEMEKEDEMEKEDEMEMEKEDEEEVTTTPATKRRKRNKKKKKAAATVA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtacatgaaagctgcggagatcctggagaaagtcgaggcaaagcagggcgct
ttgaaaactctggtttacgacagcagattcccgcacatcaagcagctgtttgctctcgtt
tgtgagacgcaaaagttttccgccgtcctggaggagatcatcgagtccaccaagctgctc
aaacagaccaagctgggcataaacctggccaaggtgctggtgtacgacctgctgatcggc
cgggggctcaagtgcggcggctcctggaagaccgcgatgatgaagcaccgcgccaggatg
caggcggcgctggcccgcatgaaggtgaagcagaaggtcagcaggaacgaggacctgctc
ccgcaaagcgcccagaagctcgtcggggaccagctgcccaggtatgtgcgcgtaaacacc
ctgaagaccaccgcggaggatgcggtggactatctgaagagggacggcttctgctacctg
ggacaggccggcaggctggaggacttgtccctgaagaggaaagactttgtgagggacatg
cttgtgccagagctgctggtcttccctcctaaaacagagtttcatgagcatttcctatac
aaggccggccacgtcattctgcaggacaaagccagctgcctccccgcgtacctgctcaac
cccccacccggcagccatgttatcgatgcctgcgccgccccgggcaacaagaccagccac
ctggctgccctcatggagaacaggggcaagctgtttgccttcgatttggatgccaagcgt
ctggccaccatgtcgactctgctgctgcgggccggggtcacctgccagcagctggcccac
caggacttcttaaaggtggaccccgacggcccgcagtttaaagacgttgagtacatcctg
ctggatccatcctgcagtggctcaggtatggtgtgtctccgggacgacgcgtcatccgct
gaccaggagaaggttcaggcccgtctggcctccttggcctccttccagctgctgtgcctg
aaccacggcctcaagttctcccgtctgaagcgcctggtctactccacctgctccatccac
agccaggagaacgaggaggtcgtagcggcctgtctgcagcagaacccggacttcaggttg
gttcctctgctggctcagtggccagaacgcggcctggagcctctcacccagtgtcttcgt
gcgagcaccaccaagacccgcacacacggcttcttcgtggctctgctggagaggcacacc
ggggctgggagtaagaggccagcgcttcagatgagcgtgccagaggcgatgcctctcaaa
ccgaccaccggcgacaagagacctggcgcttcagatgaaaagagacctggcgcttcagaa
gaaaagagacctggcgcttcagaagaaaagagacctggcgcttcagaagaaaagcgacct
ggtgctttagaaggaaaagcgtctgaagccttggaggatgagatggagaaggaggatgag
atggagaaggaggatgagatggagatggagaaggaggatgaggaggaggtcaccacaaca
cctgcaacaaagaggagaaagaggaacaagaagaagaagaaggcagccgccacagtggcg
tga
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