KEGG   Gasterosteus aculeatus (three-spined stickleback): 120829934
Entry
120829934         CDS       T07457                                 
Name
(RefSeq) tubulin alpha chain-like isoform X1
  KO
K07374  tubulin alpha
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145  Phagosome
gat04210  Apoptosis
gat04530  Tight junction
gat04540  Gap junction
gat04814  Motor proteins
gat05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120829934
  09143 Cell growth and death
   04210 Apoptosis
    120829934
  09144 Cellular community - eukaryotes
   04530 Tight junction
    120829934
   04540 Gap junction
    120829934
  09142 Cell motility
   04814 Motor proteins
    120829934
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120829934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gat03019]
    120829934
   03036 Chromosome and associated proteins [BR:gat03036]
    120829934
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gat04812]
    120829934
   04147 Exosome [BR:gat04147]
    120829934
Messenger RNA biogenesis [BR:gat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120829934
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120829934
Cytoskeleton proteins [BR:gat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120829934
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120829934
  Exosomal proteins of other body fluids (saliva and urine)
   120829934
  Exosomal proteins of colorectal cancer cells
   120829934
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 120829934
NCBI-ProteinID: XP_040050489
LinkDB
Position
XII:5586477..5598212
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDIVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPAN
QLVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSIDGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtatctccatccacgtcggtcaggccggtgtccagattggcaacgcctgc
tgggagctttactgcctggaacatgggatccagccggacggacagatgcccagtgacaaa
accatcggaggaggagacgactccttcaacaccttcttcagtgagaccggagctggaaag
cacgtcccgagagctgtttttgtggacctggagcccaccgtcatcgatgaggtgcgcagt
gggacttaccgccagctgttccaccctgagcagctgatcactggtaaggaggacgctgcc
aacaattatgcccgtggacactacaccatcggcaaagagatcatcgacattgtgctggac
aggatccgcaagctgtcggaccagtgcaccggccttcagggcttcctggtgttccacagc
ttcggaggcggcaccggctccggcttcacctctctgctgatggagcgtctctctgtcgac
tacggcaagaagtccaagctggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaacgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtcgataacgaggccatctacgatatctgtcgtaggaacctcgatatcgag
cgtccctcctacaccaacctgaacaggttgatcagtcagatcgtgtcctccatcactgct
tctcttcgctttgatggtgccctcaatgttgatctgacagagttccagaccaacttggta
ccatatccccgtatccacttccctctggccacctatgcccctgtcatctctgctgagaag
gcttaccacgagcagctaacggtgtccgaaattacaaatgcctgctttgagccagcgaat
caattggtaaaatgtgaccctcgccacggcaaatacatggcctgctgccttttgtatcgt
ggtgacgtggttcccaaagatgtgaatgctgccattgccaccatcaaaaccaagcgctcc
atccagtttgtggactggtgccccactggtttcaaggtgggcatcaactaccagcctccc
actgtagttcctggtggagatctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgcc
aagcgggcctttgttcactggtacgtgggggagggaatggaggagggagagttctcagag
gccagagaggacatggcagctctggagaaggattatgaggaggtcggagctgactctatt
gacggtgagggagaggaagagggagaggaatattaa

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