Gasterosteus aculeatus (three-spined stickleback): 120830129
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Entry
120830129 CDS
T07457
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120830129 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120830129 (thoc5)
03041 Spliceosome [BR:
gat03041
]
120830129 (thoc5)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120830129 (thoc5)
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120830129 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
120830129
NCBI-ProteinID:
XP_040050549
UniProt:
G3P525
LinkDB
All DBs
Position
XIII:9410079..9416452
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AA seq
684 aa
AA seq
DB search
MSSEALKKRKTKVVRSEGGTPETKRGRGDADQQDVRVYSEEVELDGRDPEQDFIQYKESC
ESLAGLMSEILDLKGNGAKDGCAEVEQKRMQSCIHFMNLKKLNRLAHMRLKRGRDQTHEA
KQRVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVPEEEFYQEAPQEISRPQLT
KNDPHQLTLARLDWELEQRKRLAEKYKESQTSKEKIQKSIEVKKEHLTSLQPGLNAIMQA
SIPVQEYLSMPFEQAQIQTEVARHLPPPLYVLFVQANAYGQACDKNLCVSISGDVDEAKA
LSKPPEDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMLKRHPLSLCLDLKCKDGS
ILHLYFYYLLNLNIMTVKTKVSTSTDINAAISAGDLLKPDTLLSCLYTNDQGRETPNPAN
RYQFDKVGIVSFADYVDDLGHPYTWVQSLGGLHFPKDPTEGVRLGSSLSASHMESTMKLL
RGRLLSRLALHKQFASLEHSIIPVSSECQHLFPAKILTRLARWTQSTQQEYMDLPYTRHV
TEAGLAKETDLYFMAVVERGTARLHAAVVLNPRYPEISPLFSLSLNWKGERSGRTDDNLR
AVESEVNVFKNELQGPRPGHQLLTNQFVRLCVCLDVYLETEEQDDSVEGPREFPREKMCL
RTVRGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaggccctgaagaagcgaaagaccaaggttgtccgcagcgagggaggaacc
ccggagaccaagcggggtcgcggagacgcagatcagcaggatgtgcgcgtgtacagcgag
gaggtggagctggacggcagggaccccgagcaggacttcattcagtacaaagagtcctgt
gagagtttggctggactcatgagtgagatcctggatctgaaaggcaatggagccaaagac
ggttgtgctgaggtcgagcagaaacgcatgcagagctgcatccacttcatgaacctgaaa
aaactcaatcgtttggctcatatgcgactaaagaggggcagagaccagacacatgaggca
aagcagagagtggatgtgctgcaccttcagttacaaaacctgctgtatgaagttatgcat
cttcagaaagagatcagcaaatgtctggagttcaagtccaagcatgaagaaatagacttg
gtgcccgaggaggagttctatcaggaggccccacaggagatttccaggcctcagctcaca
aaaaatgatcctcaccagctcacactggctcgactggactgggagcttgaacagcggaag
aggttggcagagaaatacaaggagtcacaaacatcaaaggagaagatccagaagagcatc
gaggtgaagaaggaacatctgacaagcttacagccaggactcaacgccatcatgcaggcc
tccataccagtacaagagtacctgtccatgccttttgaacaggcacagattcagacggag
gttgctcgccacctgcctccacctctctatgtcctgtttgtccaagccaatgcctacggc
caggcctgtgacaagaacctgtgtgtctcaataagtggtgatgtggatgaggccaaggcg
ctgtccaaacccccagaagactcgcaggatgatgagagtgactccgatgcagaggaggaa
caggagaaaacaaaacgaagaaggccaactacaggcggccagctggatgacaaaagacgg
gagatgctgaaaaggcacccgctgtccctttgcttggacctcaagtgtaaagatggcagc
atcctccatctctacttctactacctgttgaatctgaatattatgacggtcaagaccaaa
gtctccacctccacggacataaacgcagccatcagtgcaggagacctgctgaaaccagac
actctactcagctgtctctacacaaacgaccagggacgagaaacccccaatccagctaat
cgctaccagtttgacaaagtcgggattgtgtcctttgctgattatgttgacgatctgggc
catccctacacgtgggttcagagtctaggaggacttcattttcccaaagaccctacagag
ggcgtgcgcctcggcagctctctgagtgccagccacatggagagcaccatgaagctgctg
agggggcgactcctgtcccgcttggctttgcacaaacagtttgcatcgctcgagcacagc
atcatcccggtctccagtgagtgtcagcacctctttcctgccaagatcctcacgcgctta
gctcgctggacgcagtccactcagcaggagtacatggacctgccatacacgcgtcatgtg
actgaggctgggctggcaaaggagacggacctgtacttcatggctgtggtggagaggggc
acagctcgtctccatgccgctgtggtgctgaatccccgttacccagaaatctcccctcta
ttctccctgtccctcaactggaagggagagcgcagtggacgcaccgatgacaaccttcga
gccgtggagagcgaggtcaacgtgttcaaaaatgaactgcagggaccacgaccaggacac
cagctcctgaccaatcagtttgtacgcctctgtgtctgcctggatgtgtatttggagact
gaagaacaggacgacagcgtggagggacctcgagagtttcccagagaaaagatgtgtctg
cgcactgtcaggggtccaaatcgcctgaagccgttcaagtacaaccacccgcagggtttc
ttcagtcaccgctag
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integrated database retrieval system
