Gasterosteus aculeatus (three-spined stickleback): 120830143
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Entry
120830143 CDS
T07457
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120830143
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120830143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_1
LRR_4
AAA_16
Motif
Other DBs
NCBI-GeneID:
120830143
NCBI-ProteinID:
XP_040050568
LinkDB
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Position
XIII:19587980..19639722
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AA seq
1118 aa
AA seq
DB search
MDQGEDPEEGVPPSEASLCGEHDTQTTAQRIRKRPGAGPEPSSVNMKRKRYTGPSADASS
HQQRGKSPEPRCVSMKSHRSNDHLINFKDGSCSYDPEEDQESSEVPTGPSAQQHQTHLDS
IFMLLEENILTFLKNELKKIQNVVSSDYQECLESQREDEEVLDEEQGRFREAFVKISVRF
LRKMKQEELADRVQRLFAAAVCQRELKSNLKKKFQCVFEGIAKAGNPTLLNEIYTELYIT
EGGTAEVNKEHEVRQIKTASRKPARPETTIRLEDLFKASAGGEEPIRTVMTKGVAGIGKT
VLTQKFTLDWAEDKHNQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSETKAAGICRFE
EFQVVFIFDGLDECRLPLDFHNNEILTDVTESASVDVLLTNLIRGKLLPSARLWITTRPA
AANQIPPECVGMVTEVRGFTDPQKEKYFRKRFRDEKQASRIISHIKISRSLHIMCHMPVF
CWITATVLEEVLKTREGGELPKTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWSQESRKT
IESLGKLAFDQLQKGHLIFYESDLTECGIDVKAASVYSGVFTQIFREERGLYQDKVFCFV
HLSVQEFLAALHVHLTFFNSGVNLLSEEQTTSPWSEIFGDKPKPMCLYQSAVDKALLSPN
GHLDLILRFLLGLSLETNQTLLRGLLTQTGSHSQTNQRTVQYIKEKISENVSPEKSINLF
HCLNELNDGSLVEAIQQSLRSGRLSTDELSPAQWSALVFILLSSEKDLEVFDLEKYSASE
EALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSKSSSLRELDLSNNNLQDRGVKML
SAGLKGPHCDLETLRLSGCLITEEGCAFLASALRSNPSHLRELDLSYNHPGDSGVKLLSD
GQEDPNWRLETLRVEPAGVRWFRPGLRKYSCELTIDTNTVHRELKLSDNNRKVTRVKEDQ
SYPDHLDRFDYWPQLLCGTGFTGRCYWEVEWRGEVHVSLSYRGIRRNGNSDDCLFGMNDQ
SWSLGCSDKGYYVCHNNTVTRMPSSSTSSSSSSSSPSSGRVAVYVDCPAGSLSFYRVSSD
TLIHLHTFSTTFTEPLYPGFGFWSSSVSSVSLCSLEDR
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggatcagggtgaggacccagaggagggagtccctccctctgaagcctctctgtgtggg
gaacatgacacccagaccacagctcagaggatccgtaagagaccaggagctggacctgaa
cccagctctgtgaacatgaagcgtaaacgatacacgggaccctctgcagatgcaagttca
catcagcagagaggaaagtctcctgaacccagatgtgtgtccatgaagagtcatcggtct
aatgatcatctgattaacttcaaagatggaagctgttcttatgacccagaagaggaccag
gagagctcagaggttcccacaggtccgtctgcccagcagcatcaaacacacctggactcc
atcttcatgctgctggaggagaacatcctcacatttttgaagaacgagctgaagaagatc
cagaatgttgtgagttcagattaccaagaatgcttagagagtcagagggaggatgaagag
gtgctggatgaagagcaagggaggttcagagaggcatttgtgaaaatttcagtgcgcttc
ctgaggaaaatgaagcaggaggagctggctgaccgtgtgcagagactttttgctgctgca
gtttgtcagcgtgaactcaaatccaacctgaagaagaagttccagtgtgtgtttgagggg
atcgctaaagcaggaaacccaacccttctgaatgagatctacacagagctctacatcaca
gagggagggactgcagaggtcaataaagaacatgaggtcagacagattaaaacagcatcc
aggaaaccagccagaccagaaacaaccatcagattagaagatctcttcaaagcctcagct
ggaggagaggaaccaatccgaacagtgatgactaagggagtggctggcattgggaaaaca
gtcttaacacagaagttcactctggactgggctgaagacaaacacaaccaggacatacag
ttcacatttccattcaccttcagagagctgaatgtgctgagagagaagaagttcagcttg
gtgggacttgttcatcacttcttcagtgaaaccaaagcagcaggaatctgcaggtttgaa
gagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttc
cacaacaatgagatcctgactgatgtcacagagtcggcctcagtggatgtgctcctcaca
aacctcatcagggggaagctgcttccctctgctcgcctctggataaccacacgacctgca
gcagccaatcagatccctcctgagtgtgttggcatggtgacagaggtcagagggttcacc
gacccccagaaggagaagtacttcaggaagaggttcagagatgagaagcaggccagccgg
atcatctctcacatcaagatctcacgaagcctccacatcatgtgccacatgccagtcttc
tgttggatcactgctacagttctggaggaggtgttgaagaccagagagggaggggagctg
cccaagaccctgactgagatgtacatccacttcctggtggttcagtccaaagtgaagaag
gtcaagtacgatggaggagctgagacggatccacactggagtcaagagagcaggaagacg
atcgagtctctgggaaaactggcctttgatcagctgcagaaaggacacctgatcttctat
gaatccgacctgacagagtgtggcatcgatgtcaaagcagcctcagtgtactcaggagtg
ttcactcagatctttagagaggagagaggactgtaccaggacaaggtgttctgcttcgtc
catctgagtgttcaagagtttctggctgctcttcatgtccatctgaccttcttcaactct
ggtgtcaatctgctgtcagaagaacaaacaacctccccgtggtctgaaatctttggagac
aaacctaaaccgatgtgtctctaccagagtgctgtggacaaggccttactgagtcctaat
ggacacctggacctgattctccgcttcctactgggtctttccctggagaccaatcagact
ctcctacgaggtctacttacacagacaggaagtcactcacagaccaatcagagaacagtt
cagtacatcaaggagaagatcagtgagaatgtgtctccagagaaaagcatcaatctgttc
cactgtctgaatgaactgaatgatggttctctagtggaggcgatccaacagtcccttaga
tcaggacgtctctccacagatgaactgtctcctgctcagtggtcagctctggtcttcatc
ttactgtcatcagaaaaagatttggaggtgtttgacctggagaaatactctgcttcagag
gaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctactgagtggc
tgtaacctctcagagagaagctgtgaagctctgtcttcagttctcagctccaagtcctct
agtctgagagagctggatctgagtaacaacaatctgcaggatagaggagtgaagatgctg
tctgctggactgaagggtccacactgtgacctggagactctcaggctgtcaggttgtctg
atcacagaggaaggctgtgcttttctggcctcggctctgaggtccaacccctcccacctg
agagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtctgat
ggacaagaggatcccaactggagactggagactctcagggtggagcctgctggagtccga
tggttcagaccaggtctgaggaagtattcctgtgaactcacaatcgacacaaacacagta
cacagagaactcaaactgtctgacaacaacaggaaggtgacacgtgtgaaggaggatcag
tcatatcctgatcatctagacagatttgactactggcctcagctgctgtgtggaactggt
ttcactggtcgctgttactgggaggtcgagtggagaggagaagttcatgtatcattgagt
tacagaggaatcaggaggaatggaaacagtgatgactgtttgtttggaatgaatgatcag
tcctggagtctgggatgctccgataaaggttactatgtttgtcacaataatacagtaaca
cgcatgccctcctcctccacctcctcctcctcctcctcctcctccccctcctctggtaga
gtagcagtgtatgtggactgtcctgctggctctctgtccttctacagagtctcctctgac
acactgatccacctccacaccttcagcaccacattcactgaacctctttatcctgggttt
gggttctggtccagttctgtgtcctcagtgtctctgtgttctctggaggaccga
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