Gasterosteus aculeatus (three-spined stickleback): 120830412
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Entry
120830412 CDS
T07457
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120830412
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120830412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
Ank
SOS1_NGEF_PH
PH_13
C1_2
Motif
Other DBs
NCBI-GeneID:
120830412
NCBI-ProteinID:
XP_040050975
LinkDB
All DBs
Position
XIII:1794925..1828210
Genome browser
AA seq
1787 aa
AA seq
DB search
MELSRRRVPLYGQAKVFALLEGYDSVPEDAEVYIVLEGSTLVHVTRAQSDVMLCFIVPGH
NLAEVVSVQAYLSSGTALVTWVGGASLEYVQDDAQDLAEHLVMHAHCLSSKDHTELSSLF
NLGQESSRGAMDRRVALAVANLDIPRSWNVLGSHGGDERTPRESPLHLAVRWGLFRLAEL
LLCQPGGLMAVSLPNQEGVTPLQLAQTAANTEILELLAHPPNPLATPPAGLSQVWADRSR
LLRFCHDSGNLTLTVRQNLRWSSEESRHADILLLRERLRDQDFLREIKALRREHRETVSG
KERPVDDARDNALHSDINRAALGETDREEPLMFCLNEEDEDEEKDDPSLFDSGQTQSTRE
SQAQSPTLAAAVRLSAMIHGKGRVFANAMLVDQTLLMFQVDGADIKYRSPGEEEEEEDEV
SPAPSLGRPCSFSTTPPASRNHAQDRHPPSPRGGEKGIRGPEIRKEPSCRTSPPSTFTSP
PSFPSSPLVSAFRLYEGGQRRPCLPVSPALNRRGYSLTEASQGLSPSLEGDSGEEDILGH
SYPSSSVKKQSIPRSSSREERDSFEASPDFNRLHSPPKSPEEAEVRLRSYSFSSPKAKPS
RPLLNRDTTVADQAEEQRAFSLTETTKEKRRLGFRKRAQSAEEESSASLQHLTLTEFLKE
IEDEEWDKYIIPSKVESEKYKVSRTFSFLKSRMSSTRNKTKVKGKEAKEGKEKAGATNGH
QFVSASPPSAALCVGCDRSVSGKELLQCSNCFLNVHKNCRESVAACGKKPQERNALLLKT
KTMSLPHNSVKDNSPSTFCSSASLPTTTREKRETAGPLSKSFSVSIDSRRLSDAGGLGGE
GAVTAWTNGAVADEGSPATATPTSTELPTATPDGVDAPLMSGLSAEELGLEVESWSLAVS
PEFCRQHDRHTIKRQEVIYELMQTELHHIQTLTVMSGVFRRGMLEELQLDWDCVARIFPC
LDPLLLFHKNLFGALLERRQAAAHTDTPGDYLIHQIGDILLQQFSDEYAEEMKQVYGEFC
SHHTEAVNVFKELQQQNKKLQNFVKQQSNNTLVRRREVPEFILLVTQRITKYPVLLERIL
HYTREESQEHADLSRALAQIRNIIAAVDLTVNRHERCQELQEVLVRLENKSFAKLKNDKV
FRKQDLHSQHRVLQYKGLVYWKTATGRLKDTLALLLTDVLVFLQEKDQRFVFAAVDQKPP
VIPLQKLIVREVANEERGMFLISASSVGPEMYEVHTNTRDERNAWMRHIRQAVESCPEEE
EEEERTAEIEESRRVAELRVQKISKFQEMLSGQDQLICNSLEEKLQLYAELTEFTLRSPE
PVPHRHLVLADPDAETPRQASALLIAALREAENLISVLQSRDGLTVKSAGYPAQGPECCG
YDSRGSSVHESPSEPDYLSTLSISSASPGSDGELAGLDGALWSPAVELSRGDAKGTLLKV
AESVQNLTQLLYSLQAAVTVQDSCYEVQKLLLLEGERPQLHLEQEKQKSVDKKKEEVEKR
GLERKKEEVDEVQKLHVKLKQVQQRWDKECLARDKRQCEQESVLEQREHRCLLEAERLRC
EREELEAQLLEYQQNLERLKAGQRSVEREKEKIEAQQRLLQRWRHHRQSSLPMTIPLDGH
KVSGHSRSGSLDGNLCVYENEATVLACLQQSHPPRRRPAGDNQQQHLLSAASGKNCAANL
GLSASLYNSLNTLLSQAHGKPPADGPTCPRPLSGRVSTQQHVTHSDFSVPMERRSPDPWS
SEVTGHRLYEDGYSTSPSLMPLLPPHAYLSLEGENGEEGCEENIVYL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggaggagggtgcccctgtatgggcaggcgaaggtgtttgctttgctg
gagggatacgactcggtgccggaggatgcagaggtctacattgttctggaaggttccacg
ctggtgcacgtcaccagggctcagagtgatgtcatgctgtgctttatagtaccgggacac
aacctggcagaagtggtctctgtccaggcatacctgtcctctggaaccgcactcgtgacc
tgggtgggcggagcttccctggagtatgtccaggatgacgctcaggacctggcagagcac
ctggtgatgcacgcgcactgcctcagctccaaggatcacacggagctgagcagcctcttc
aacctgggccaggagagctcccgcggggcgatggaccgccgcgtggccttggccgttgcc
aacctggacatcccccgcagctggaacgtgctgggaagccacgggggagacgagcgaacc
cccagggagtcgcccctccacctggccgtgcggtggggtctgtttcgcttggcagagctg
ctgctgtgtcagccggggggtctgatggcggtgagtctgccaaaccaagagggagtgacg
ccgctgcagctagcacagacggcggctaacacggagatcctggagctgctcgcacacccg
cccaaccccctggccacgcctcctgcaggtctgtctcaggtgtgggcagaccggtcccgc
ttgctgaggttctgccacgattcgggcaatctgactctgactgtgcggcagaaccttcgg
tggagctcggaggagagccggcacgccgacatcctgctcctcagggagcggctcagggac
caggacttcctcagagagatcaaagctctaaggagagagcacagggagactgtctcaggg
aaggaaaggccggtggatgatgccagagacaacgcattgcattcggatatcaatagagca
gctctgggggaaactgaccgcgaggagccgctgatgttttgtctaaacgaagaggacgag
gatgaggagaaggacgacccgtcgctgtttgactctggacaaacccagtccacacgggag
agccaggcccagtctccgacgctggctgctgctgtccgactctcagcgatgatccacggc
aaaggccgagtgtttgccaacgccatgctggtggaccagactctgctcatgttccaggtg
gacggcgctgatattaaataccggtctccgggggaggaggaggaggaggaagacgaggtg
agccctgcgcccagtcttggccgcccgtgctccttctccacgactccccccgcctcgagg
aaccatgcccaggaccgccacccgccctcaccccgcggcggggagaaggggatccgaggc
cctgagattcgcaaggagccttcctgtcgcacgtctcccccctctaccttcacgtccccc
ccgtcttttccttcctcccccctggtgtccgccttccgattgtacgagggagggcagagg
cgtccttgcctgccagtttctcctgctttgaaccgcagaggatacagcttgaccgaggcg
agccagggcctgagtcctagcctggagggcgatagtggagaggaagacatattgggacac
tcctacccctcgtcgtctgtgaagaagcagtccatcccgcgatccagctccagagaagag
agggactcttttgaggcgtcaccagactttaaccgcctgcactccccccccaagagccct
gaggaagccgaggtccgcctgcgctcctactctttttcctcccccaaggccaagccgtcg
cgcccgctgctgaatcgagacaccaccgtcgccgaccaggcagaagagcagagagcattt
agcctgactgagaccaccaaagaaaagaggcgtttgggtttccgtaagcgggcccagtca
gcggaggaggagagcagtgcatcgctccaacacctaaccctcacagagttcctcaaagag
attgaggacgaggagtgggacaagtacataatcccctccaaggtcgagtcggagaagtac
aaagtcagccggacattcagcttcctcaagagcaggatgtccagcactcgcaacaagacc
aaggtgaaggggaaagaggcaaaggaagggaaggagaaggcgggcgccactaacggacac
cagtttgtctcggcgtccccccccagtgccgctctctgtgtgggctgcgacaggtctgtt
tctgggaaggagctgctgcagtgctccaactgtttcctcaatgtgcacaaaaactgtcga
gagtctgtggcagcctgtggcaagaagccgcaggagaggaatgcgttgctgctgaaaacc
aagaccatgtctctcccacacaactctgtgaaagacaactctccgtccacattctgctcc
tctgcttcactgcccacgacgaccagggagaagagagagaccgcaggccctctgtccaaa
agcttctccgtctccatagacagcaggcggctgagcgacgcgggggggctgggcggggag
ggcgccgtcacggcttggactaacggcgcggtggctgatgagggatcgccggccacggcg
actccaacatccaccgagctgccgaccgccacaccagatggcgtggacgctcccttgatg
agcggcctgtccgctgaggagctgggcctggaggtggagtcctggagtctggcggtcagc
ccagagttctgccggcagcacgacaggcacaccatcaaacggcaggaagtcatttacgag
ctgatgcagacggagctgcaccacatccagaccctaacagtcatgtcgggggtgttccgg
agaggcatgctggaggagctgcagctcgactgggactgcgtggctcgaatcttcccctgc
ctggaccccctgctgctctttcacaagaacctcttcggagcgctgctggagcgccggcag
gccgccgcccacaccgacacgcccggcgattacctcatccatcagattggagacattctg
ctccagcagttctcagacgaatacgccgaggagatgaagcaggtgtacggagagttctgc
agccatcacaccgaggccgtcaatgtcttcaaagagctgcagcagcagaacaaaaaactg
caaaactttgtcaaacaacagagcaacaacactctggtgaggcggagagaggtgccagag
ttcatcctgctggtcactcagcgcattaccaagtacccggtgctgctggagaggatacta
cattacacccgggaggaaagtcaggaacacgctgacctgtccagggctctagcccagatc
cgcaacatcattgccgcagtggacctgacggtgaataggcacgagaggtgtcaggagctt
caggaagtgctggtgcggctggagaacaagagcttcgccaagctaaagaacgacaaggtg
ttccgcaaacaggacctgcacagccagcacagggttctgcagtataaagggctggtctac
tggaaaaccgccacgggacggctgaaagacactctggctctcctgctcactgacgttctg
gtgttcctacaagagaaggatcaacgcttcgtgtttgctgcggtggaccagaagccacct
gtaatacctttgcaaaagctcattgttcgagaagtagccaacgaggagagagggatgttc
ctcatctctgcctcctcggtgggaccggagatgtatgaagtccacaccaacacccgagac
gagaggaacgcgtggatgagacacatacgacaggctgtggagagttgtcccgaggaagag
gaggaggaggagcgaactgccgagattgaggagtccaggcgagtggcagagctcagagtt
cagaagatctccaagttccaagagatgctgtcgggtcaagaccagctaatttgcaacagc
ctggaggagaagttacagctctatgccgagctcacggagttcaccctccgctctccagaa
cccgttccacaccgccacctggtgctggcggaccccgacgccgagacgccgcgacaggcc
tcggcactgctcattgcggcgctcagggaagcggagaacctgatctccgtcctgcagagt
cgggacggccttaccgtaaagagtgccggctacccggcccaaggaccagagtgctgcggc
tacgacagccgggggagcagcgtgcacgagtctccatctgagccggattacctgagcact
ctcagcataagctccgcctctcccgggtcagacggcgagctggcggggctggacggcgca
ctgtggagcccggctgtagagctgagtagaggagacgccaaagggacgctgttgaaggtg
gcagagagcgttcagaatctgactcagctcctctacagtctgcaggctgccgtgaccgtc
caggacagctgctatgaagtccagaagctcctcctcctggagggagaaagacctcagctc
catctggagcaggagaagcagaagagtgtcgataagaagaaagaggaagtagagaagagg
ggtttagagaggaagaaagaggaggtggatgaggtgcagaaactccacgtgaagctcaaa
caggtgcagcagcgttgggacaaagagtgtctggccagagacaaacgacagtgcgagcag
gagagtgtgctggagcagcgggagcaccggtgcctcctagaggccgagcggctgcgctgc
gagcgcgaggagctggaggctcagctgctggagtaccagcagaacctggagcgactgaaa
gcgggccagaggagcgtggaaagggagaaggagaagatcgaggcccagcagaggctgctg
cagcgctggagacaccaccgccagagcagcctgcccatgaccattccgctggatgggcac
aaggtgtccggccacagccgctcgggcagcctagacggcaacctttgtgtgtacgagaac
gaggccaccgtgctcgcatgcctccagcagagtcaccccccccgccgccgccccgctggc
gacaaccagcagcagcatctgctctctgccgcgtcaggcaagaactgcgccgccaacctg
ggcctcagcgccagcctgtacaacagcctcaacaccctgctgagccaggcgcacggcaag
ccgcctgcggatggtcccacgtgcccccggcccctcagcggcagggtcagcacccagcag
cacgtgacccacagcgacttcagcgtgccgatggagaggcgctccccggatccctggagt
tcagaggtcaccggacacagactctatgaggatggctactccacgtctccatctctcatg
cccctcctccccccccacgcctacctctctctggaaggagagaatggggaggagggatgc
gaggagaacattgtttatctctga
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integrated database retrieval system
