Gasterosteus aculeatus (three-spined stickleback): 120830415
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Entry
120830415 CDS
T07457
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120830415 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120830415 (utp15)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120830415 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
120830415
NCBI-ProteinID:
XP_040050985
UniProt:
G3NK84
LinkDB
All DBs
Position
XIII:1788917..1794757
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AA seq
528 aa
AA seq
DB search
MASFKPTKIQVYPKLGEKVTQDTLYWKNYKPAIQIKEFGAVSSIDFSPVAPHNFAVTAFT
RIHIYGPYSLEPVKSLTGFKNTAYCARFRSDGQLLVAGCEDSVVRLFDVSGRVALRVFKG
HTKAVQVTDFTSDQYQIFTGSDDYTCRLWDLPNATELNRYREHTDYIRCGVTSKLNRNLF
ITGSYDHTLKVFDARADKSVMTMDHGQPVESLLLYPSEGLLVSAGGRHVKVWDLLKGGQP
LVSLKNHHKTVTSLCLSSNGQRLLSASLDRHVKVYNTTNFKVVHNLDYAASILSLALAPN
DESIVVGMTNNILSIKHRKSPDESKGGPGQQKRRPSYRVSVKGKTYAPKQEDYLVSKPVK
EYLAKYDKQLKKFNVSKALDAAMEIWKRQRNPDVMVAVMKELDRRGTLKNALAGRDEQGL
CSLLHFLLGNVVDPRFTPVLVPVAELILDVYSQVIGQSPLVDRQLLRLQDMLEKEIGYQQ
ELMEVLGMLDTLFASNLPKMEVPCPDTSRANGLSPGEVGTSRPPLHAT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtttaaacctaccaaaatccaagtatatccaaaactcggagagaaagtcaca
caggacacgctgtactggaaaaactacaagccggcaatccagataaaagaattcggtgct
gtctcaagcatagacttctccccggtggcgccacataattttgcagtgacagcgttcaca
agaatccacatttatgggccctactccctggagcccgtgaagtcgttaacagggtttaag
aacaccgcgtactgtgcacggttcaggtcggacggtcagctgctcgtggcgggatgcgag
gactctgtggtccggctgttcgatgtcagtggcagggtggcactgagggtcttcaaaggg
cacacaaaggctgtacaggtcacagacttcacctcggaccagtaccagatcttcacaggc
tcggacgactacacctgtcggctttgggacctcccgaacgccacagagctcaaccgctac
agggaacacaccgactacattcgctgtggtgtcaccagcaaactcaacagaaatctcttc
attacgggatcctatgaccacacgctgaaagtgtttgatgccagagcagataagagcgtg
atgaccatggaccacggccagccagtggagagtctgcttctctacccctccgagggactc
ctcgtctccgcaggtggacgtcacgtgaaggtgtgggatttgctgaaaggggggcagcct
ctggtgtcactgaagaatcatcacaaaactgtcacctctttgtgtctcagcagcaacggt
cagagactgctgtctgcttctttggacaggcatgtaaaggtgtacaacaccaccaacttc
aaagtggtgcacaacttggactacgctgcctcaatcctcagtctggctctggctccaaac
gacgagtccatcgtcgtgggcatgaccaacaacatcctgagcatcaaacacaggaagagc
cccgacgagtcgaagggaggccccggtcagcagaagcgacggccgtcctatcgcgtctct
gtgaaggggaagacctacgcccccaagcaggaggactatcttgtctccaaaccagtgaaa
gagtatttggccaaatacgacaagcagctgaagaaatttaatgtgtcaaaggctttggac
gcggctatggagatatggaagaggcagagaaaccccgatgtcatggtggctgtcatgaag
gagctggatagaagaggaaccctgaagaacgctctggcaggacgggatgagcaggggctc
tgcagcttgctccacttcctgttagggaacgtggtcgaccccaggtttacccctgtgctt
gtgccggtggctgagttgatactggacgtctacagccaggtgatcggtcagtcgccgctc
gtggaccggcagctgctgcgtctgcaagatatgctggagaaagagatcggctaccagcag
gagctcatggaggtgctgggcatgttggacaccttgtttgcctccaacctccccaaaatg
gaggtgccgtgccctgacaccagcagggctaacggcctgtccccgggtgaagtgggcacc
tccagaccaccgcttcatgccacttga
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