Gasterosteus aculeatus (three-spined stickleback): 120830420
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Entry
120830420 CDS
T07457
Symbol
scarb2a
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome membrane protein 2a
KO
K12384
lysosome membrane protein 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120830420 (scarb2a)
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Gene cluster
GFIT
Motif
Pfam:
CD36
DUF7657
DUF2523
Ly49
SIT
TMEM51
Orthoreo_P10
Cytomega_TRL10
DUF4245
DUF6097
Motif
Other DBs
NCBI-GeneID:
120830420
NCBI-ProteinID:
XP_040050989
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Position
XIII:complement(17347346..17361205)
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AA seq
528 aa
AA seq
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MTRRSCCIYATGIVCAHLLIVGIALVVAQVFQTMIHSRLKKEITLTENSQNVGRMKDXPP
PPVYMEYYFSNVTNPELFLAGGKAAVKQIGPYTYREYRPRVNITFLENGTKLYALNPKTF
VFVPEKSAGNPEVDLIRTVNIPFVAIMNELNSYSFFLRTAVSMYLKSLGIEVFMTRTVHE
VLWGFKDPVLTKVHSLKPEVDEYFGLMWKKNGTHEGEFVFHTGEENYLDYGKIDTWNGLR
KMSWWSSNQSNMINGTDGAVFHPLINRNELLYIFAADLCRSIHLGYVKDVEVKGIQAYRF
APPNDVLMNPKENPTNAGFCVPAGDCLSTGVLKVSVCREGAPIVVSFPHFYQADPKYINA
VEGLSPNKEEHETYLDLQPTTGVPIRACKRAQLNIILKRVQGFPITKLINETIFPIMFVN
ETATIDDDSASQMRTMLLIVTLVSNFPLLIVGMGIILLLVLVVLFCRNRQKKNEVKRIDF
TEAFHSFTTVKDDTAYTQVSDKPDEPSANQPTRNGSYIAMSPVEAQKC
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcaggtcctgttgcatttacgccaccggcatcgtgtgcgctcacctcctgatc
gtggggatcgccctggtcgtggctcaagtcttccaaacaatgatccacagccgcttaaaa
aaggaaattaccctgaccgagaatagccaaaatgttggaaggatgaaagatnatccacct
ccacccgtttatatggagtattacttctccaacgtcacaaatccagagttgttcttggcg
ggtgggaaggcagctgttaaacagatcggaccatatacttacagggaataccggccgcgg
gtgaacatcaccttcctggagaacggaaccaagctttacgccctcaaccccaaaaccttt
gtgtttgtgccggagaagtccgctggcaaccccgaggtcgacctgatcaggaccgtgaac
atcccgtttgtggcgatcatgaacgagctgaactcctactccttcttcctgcgaactgcg
gtttccatgtacttgaagagcctgggcatcgaggtgttcatgacccgcacggtccacgag
gtcctgtggggcttcaaagaccctgttctcacaaaggtccactccttgaagcccgaggtg
gacgaatactttgggctgatgtggaagaaaaatggcacccatgaaggcgaatttgtgttc
cacaccggggaggagaactacctggactacggcaagatcgacacttggaacggcttgagg
aagatgtcgtggtggtcttcaaatcagagcaacatgatcaacggcacggacggcgccgtc
ttccacccgctgatcaaccggaacgagctgctctacatcttcgctgcagatctctgcagg
tccatccatctaggctatgttaaagacgtcgaggtgaaaggcatccaggcgtaccgcttc
gccccccccaacgacgttctcatgaaccccaaagagaaccccaccaacgcgggcttctgc
gtgccggcgggggactgcctcagcaccggggtgctcaaagtcagcgtctgtcgagaaggt
gctcccatcgtggtgtctttcccccacttctatcaagcagaccccaagtacatcaacgcc
gttgaggggctcagccccaacaaggaggagcacgagacgtacctcgacctgcagccgacc
actggcgtccccatccgggcctgcaagagggctcagctcaatatcatcctgaaacgagtc
caaggcttccccataaccaagttaatcaacgagaccattttccccatcatgttcgtcaat
gagacggcgaccattgacgacgattctgcatcccagatgaggacgatgctcctcatcgtg
actctcgtgtctaacttccctctgctcatcgtgggcatgggcatcatcctgctgctggtg
ctcgtcgtcttgttctgccgaaaccgccagaagaagaatgaagtaaaacgtattgatttt
actgaagcttttcattcttttactacggtcaaagacgacacggcctacactcaggtcagc
gacaaacccgacgagccgtcagccaaccagccgacgaggaacggctcctacatcgccatg
tctccagtggaggcccagaagtgttga
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