Gasterosteus aculeatus (three-spined stickleback): 120830421
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Entry
120830421 CDS
T07457
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120830421 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120830421 (nipbla)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120830421 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
HEAT
UBM
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
120830421
NCBI-ProteinID:
XP_040050990
UniProt:
G3NY23
LinkDB
All DBs
Position
XIII:7411887..7436443
Genome browser
AA seq
2534 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNAMQQPMVPT
YKITQNSLHSPSQPANFQPAAMSPNTPSRFVAPPTGSSSRYMGQNSPVPSPYTPQSPAPG
YIQQYPHQQPPSYNQHQQIQQVSVASPMVPGGIRNIHEGKVSGQMANAANHHSDRHGTED
YMNIVHRMSTEEGDSTMRNPSFSLRSPQSGCSPAGSEGTPKPGSRPPLILQSPPPYAPSP
REGGPLQNQQLQQRKKGPAVKEEKDLYDIVSSPNKDSTKLTLKLSRVKSNESDTPGDALP
GMDDNSDMDADLVFQKVPVLQQNLGRMQQQQQACGLQPPSSPYDEAELDALAEIERIERE
AASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLTPQEAT
AAGNGASRPPLMVSIDLQQAGRADGQLDPCPTAPIPALEAQRWPEEPASGPAAVEGSDTA
LLVNPDGRPEVIKNRVEKHEGRRDSREPPKHRHDEKSSDRRGDPPKSSNRGEHGRDRDRE
SDRDRRHRSETGGRDRRSPDPRIRSDRARYRASSAGEPGRSGNRPDGPKPASSASGAKLP
DSFPAPLLGGHSGALKNFQIPKIKRDKDADGSNESQMWGQPKVKLERLGLVEDFEKRPKP
VVVLKKLSVDQIQRIIRHSKSGKNRMSSVRSSKVPGGMDPSVLKELPPELLAEIESTMPL
CERVKMNKRKRSTVNEKPKYAEVSSDDDYDANGESAKKRQRRDKDRSWDVEERDRRGSGE
HRKSGGNREGRRGSGSRYRDSSDEHSPPPSVTEIARKIKIKEKQKKRKAYEPKLTHEELM
DSSTFKRFLTSIDNILENLEDVDFTAMAAADDDEIPQEFLLGKHQLSELGSESAKIKAMG
ISSRIPSDKLVKLLNILEKNIQDGSKLSTMMSHEHDAEDEEKLWRDLIMERVTKSADACL
TALHIMTSLHMPKAVYIEDVIERVLQYTKFHLQNSLYPQYDPVYRVDPHGGGLLSSKAKR
AKCSTHKQRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQL
CAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPLYIQMVTA
LVLQLIQCVVHLPNDRDIFDEYESKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQAE
EDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGT
VAARLRKDAVTSKMDQKSIDRILQQSQGSDETQQLQKALLDYLEENAETDPSLVFARKFY
VAQWFRDATTEAEKSMRSQNSKDDDSSDGPQHAKEMETTGEIMQRAEKRKKFLRNIIKAT
PSHFTLLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMK
CLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLI
ERILDTGISVRKRVIKILRDICLEQPTFSKITEMCVRMIRRVNDEEGIKKLVNETFQKLW
FTPTPNHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQL
VDNLVEHILKYEESLSDNKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCN
TANDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVV
NKVTHNYKFVWACFNRFYGALNKLKVQHHEDPNSTTLVANKPFLLRSLFTVGALARHFDF
DLEEFKGTNKVVIKEKVLELLIYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKTLY
NGILADSASSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKQEDLKEMGDISSGMSS
SIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRN
KSDQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQSIESSRRTIIRGFRQDETHSALCSHLF
AMIRTNRQHRRAFLISLLSLFDDSSKTDVNMLLFVADNLAYFPYQSQEEPLFIMHHIDIT
LSVSGSNLLQTFKELLLKEPRRKEKKVKEWKNPSEGEDEEERMNCDSQRSDGEENSDIDD
VVRRLKKPRKPVAGPGSSESESDLEDLDLEDVEKVMRLIPDNPTGLLDFANAVQGILLLL
VLKQHLKNQYGFSDGKIQKYSPTESAKVYDKAVNRKSTVHFHPRQTIDFIANNMARATLS
TDVKKRIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAISALLGGSGPMSGPSPRN
QAGPETDDDDSEGDERTPGSSRKSKRAADSMNETVEAMDVIALSCPKYKDRPQIARVIQK
NSNGYSIHWMAGSYSGPWAEAKKRDGRKLVPWVDTIKESDIIYKKIALTSNHKLSNKVVQ
TLRSLYAAREGGAS
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctcccggccaccaccactaagagcctc
ctatacaatggaaggattgcagaggaagttacctgcctactgggctgtcgggatgagaat
ctggcctcccagctggcccatggcctcaaccaggtctccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggagatgcaccactgctgctgcagaccatgctg
gccaggaaccccggcatcttcagggagaaaaatgctatgcagcagccgatggtaccgacg
tacaagatcacccaaaattccttacatagcccttcccagccagcaaacttccagccggct
gcaatgtctcctaatacaccgagtcggtttgtggctcccccgactggctccagtagtcgg
tatatgggccagaacagtccagtacccagcccctacaccccccagagccccgcccccggc
tatatacagcagtatccccatcaacaaccacccagctataaccaacaccaacagatccaa
caagtgtctgtggccagtcctatggttccaggtggcatccgaaatatccatgagggcaaa
gtgtcggggcagatggccaacgcggccaaccaccactcagacagacatggcacggaggac
tacatgaacatagtgcaccgaatgagcactgaggagggcgactccaccatgaggaatcct
tccttctctctgaggtctccacagtccggctgctccccagcagggagcgaaggaacgccc
aaacccggttctcgtcccccgctgattctgcagtcgccacctccctatgcgccctcaccg
agggaggggggacctctccagaaccagcagctccagcaaaggaagaagggccccgcggtg
aaagaggagaaagatttgtacgacattgtgagctctccaaacaaggactccacaaaactc
accctcaagctgtccagggtcaagtcaaatgagtctgatactccaggtgatgccctaccg
ggaatggacgataactctgacatggatgcagatctggtctttcagaaggtgcctgttctc
cagcaaaatctaggtcggatgcagcagcagcagcaggcctgtggcctccagcctcccagt
tccccgtatgacgaggccgagctggatgccctggctgaaattgaaaggatagaacgagag
gcggccagtgagaagtgctccaaggaggttcaagataaagacaagccactgaagaagaga
aaacaggactcctttcccctggagcctggcgcaggaggaccagggggccccacaggtgcc
ccgggcagcggatcgaccggcgggggcaatgctggcaaactgaccccgcaagaggccacc
gcagccgggaacggtgccagccggcctcccctcatggtgagcatcgacctccagcaggcg
ggccgagctgacggccagctcgacccctgtccgaccgcccctattccagccctcgaggcc
caacgttggcccgaggaacccgctagtgggccagccgcagtggagggctctgacacggct
ctgctggtgaatccggacggaagaccggaagtcatcaagaacagggttgaaaagcacgag
ggcaggagagacagccgggagccaccgaagcaccggcacgacgagaagtcctccgacaga
cggggagacccgccaaagtcctcaaaccgtggggaacacggacgagaccgggaccgagag
tccgacagagataggcggcatcggagcgagacagggggtcgggaccggcgctcgcccgac
ccacgcattcggagtgaccgagctagataccgggcttcttccgccggggagcctggtcgc
agcggaaataggcccgatggtcccaaaccggcgtcatccgcctctggtgctaaacttcca
gattctttccccgctccgctccttggagggcatagtggcgcgctgaagaacttccagatc
cctaagatcaaacgagacaaggacgccgatgggtcaaatgaaagtcaaatgtggggacag
cccaaggttaagctggagaggctcggtttggtggaggactttgagaagaggcccaagccc
gtagtggtcctgaaaaagctctctgttgaccagatccagaggatcatccgacacagcaag
tctggaaagaaccggatgtcttcagtgaggtctagcaaagttccaggtggaatggacccg
tcagtgctgaaggagctgccgccagagctgctggcagagatcgagtcgaccatgcccctg
tgtgagagggtgaagatgaacaagaggaaacgcagcactgtaaatgagaagcccaaatat
gccgaggtcagctcggacgacgactatgatgccaatggagagtctgcaaagaagcgccag
cgcagagacaaagaccggtcctgggacgtggaggaaagagaccgccggggctcaggggag
catcggaaaagtggtggaaaccgggagggcagacgaggctccgggagccgctaccgagat
tcctccgacgaacactcgccgccacccagcgtgactgaaattgccagaaaaattaagata
aaagagaagcagaagaaacggaaagcatatgaacccaagctcacccacgaagagttgatg
gactcgtccacgttcaagaggttcttaacaagcatcgacaacatcctggagaatctggag
gatgtggatttcactgccatggcagcggcagatgatgacgagatacctcaagaattcctt
cttggcaaacaccagttgagtgaactgggcagcgagtcggccaaaataaaggccatgggc
atctccagcaggatcccatcagacaagttggtgaaattgctgaacatactggagaagaac
atccaggatggctccaagctctccaccatgatgagccacgagcacgatgctgaggatgag
gagaagctctggagagacctgataatggagagagtcacaaagtcagcagacgcctgtcta
acggctctccacatcatgacctcactgcacatgccgaaagccgtctacatagaagatgtc
atagagcgggtgctgcaatacaccaagttccaccttcagaactccctgtacccacaatac
gacccggtctacagggtggaccctcacggaggtggcctgttgagctccaaggcgaagcgg
gcaaaatgctccacgcacaagcaacgtgtgattgtcatgttgtacaacaaagtgtgcgac
attgtcagcaacatctcagagctcctcgagatccagcttctaacggacaccaccatcctc
caggtttcttccatgggaatcactccgttctttgtggagaatgtcagtgagctgcagctg
tgtgccattaaactagttacagcagtcttctcacgttatgagaagcatcgacagttgatc
ttggaggagatttttacctccctggccagactgcccaccagcaagcgctccctcaggaat
ttcaggctgaacagctcagaccaggatggcgagccgctgtacatccagatggtgacggct
ctggtgctgcagctgatccagtgtgtggtccacctccccaacgacagagacattttcgac
gagtacgagagcaaggtggatcaagatgtgttgataaccaactcgtatgagactgcgatg
agaacggcacagaacttcctctcagtcttcttaaaaaaatgtggcagcaagcaggcagaa
gaagattaccggccattgtttgagaactttatccaggacctgctgtcgaccgtaaacaag
cccgagtggcctgctgctgagcttctgctcagtctgcttggtcgcctgctggtacaccag
ttcagcaataagcagacagagatggctttgagagtagcatctctggactacctgggcaca
gtggccgcccgtttgaggaaggacgccgtcaccagcaagatggaccagaaatcaatcgat
cgaatcctgcagcagtctcaaggtagtgatgagacccagcagcttcagaaggcgctactg
gactacttggaagagaatgcagagacggatccctcactggtgtttgccagaaagttttac
gttgcccagtggtttcgggatgccaccactgaagctgagaagtccatgaggagccagaac
tcaaaggatgacgactcatcggacggaccacaacatgccaaggagatggagaccaccggg
gagattatgcagcgtgctgaaaagcgcaagaagttcctgcgcaacatcatcaaggccacg
ccgtctcatttcaccctacttaaaatgaactctgacactgtggattatgaggactcctgt
ctgattgtgcgttatttggcctccatgaggccgttcgcccagagctttgatatttattta
acacagatcttgcgagtccttggggaaagtgccattgctgtaagaactaaagccatgaaa
tgtctgtctgaggttgtggctgtggaccccagcatactggcacggtccgacatgcagcgt
ggtgtccacggtcgtctgatggacaactctaccagcgtgagagaggcagcggtggagctg
ctgggcaaatttgtgctgagcagaccccaactcaccgagcagtactatgacatgctcatc
gagaggatactggacaccggtatcagtgtaagaaaacgggtgatcaagatcctcagagac
atctgtctggagcagccaaccttcagtaagatcactgagatgtgtgtgaggatgatccgc
cgggtcaatgacgaggaaggtatcaagaaactggtgaatgaaacattccagaagttgtgg
tttactccgactccaaatcatgacaaggagaccatgaccagaaagatcctcaacatcact
gacgtggttgcagcctgtcgagacaccggctatgactggtttgagcagcttcttcagaac
cttctcaaatctgaagaggatgcgtcgtataagccagccaaaaaggcctgcgttcagctc
gtggacaacctggtggagcacatcctcaaatatgaggagtctctttcagacaacaaaggt
gtcaactcaacacggctagttgcgtgtatcaccaccttgtacttattcagcaagatcaga
gcccagctcatggtcaaacatgccatgaccatgcaaccctacctgaccacaaagtgtaac
actgccaatgacttcatggtcatctgcaacgtggcaaagatcttggagctcgtggtgcct
ctgatggagcaccccagtgaaaccttcctggccaccatcgaagaagacctcatgaagctc
atcatcaaatacggcatgacggtggttcagcactgtgtcagctgtctcggagctgttgtc
aacaaagtcacgcacaactataagtttgtctgggcctgcttcaacagattctacggtgca
ctcaacaagctgaaggttcaacatcacgaagatcccaacagcacgacattggtagcaaac
aagcctttcctgctgcgatcgctcttcaccgtgggcgccctcgctcgacactttgatttt
gatcttgaagagttcaagggcacgaacaaggttgttatcaaggagaaggttctcgagctg
ctgatatacttcaccaaacatgaggacgaggaggtcaagacgaaagccatcatcggctta
ggcttccttgtaatcatgcatcccagccagatgtttatgcccgaggtgaagaccttgtac
aacggcatcctggctgacagtgcctcctccatcaacctcaaaatccagatcctcaaaaac
ctccagacataccttcaggaggaggacacgcggatgcaggaagcagacagagaatggaag
aaactgtccaaacaggaggatctgaaggagatgggagacatctcttcaggaatgagcagc
tccatcatgcagctttatctgaagcaggtgttggaggcgttcttccacacccagtccagt
gtacggcactttgctctcaacgtaatcgctctcacactcaaccagggtctcatccatcct
gtacagtgtgtaccgtacctcattgcaatgggaacagacccggagcccagcatgaggaac
aaatctgaccagcagctggtggagattgacaagaagtacacgggattcatccatatgaag
gcagtggctgggatgaagatgtcctacaacctgcagcaatccatcgagtcgtcccgtagg
accatcataagagggttccgacaggacgagacgcactcggcgctctgctcccacctcttc
gccatgatccgaacgaaccggcagcaccggagggctttcctcatctcactgctgagcctc
ttcgatgacagctctaagacggatgtaaacatgctgttgtttgtagcagacaacctggcc
tatttcccataccagagccaggaggagcctcttttcatcatgcaccacatagacatcact
ctgtccgtgtctggcagcaacttgctgcagaccttcaaagagcttctgctaaaggagccg
aggcgtaaggagaaaaaggtaaaagagtggaagaacccgtcggaaggagaagatgaagag
gaaaggatgaactgcgattctcagaggagcgatggggaagaaaacagtgacattgacgat
gtggtacggcggctaaaaaagcccagaaaacctgtagcaggcccggggagctcagagtcc
gaatctgatctggaggatttggatctggaggatgtggaaaaagtaatgaggctcatccct
gacaatcccacaggtcttttggactttgctaatgctgttcaaggcatcctgttgctgctg
gtgctcaaacagcatttaaagaaccaatatggattctctgacggtaaaattcagaagtac
tctccaactgagtcagccaaggtgtacgataaggcagtgaacagaaaaagcaccgttcac
ttccacccacgacaaaccatagacttcatcgccaacaacatggctcgcgccacgctgtcc
acagatgtcaagaagcggattgtcagacagtacctagatttcaaggttttgatggaacat
ctggacccagatgaggaggatgaggagggagaagcatctgccagcgctaacatcagaaac
aaagccataagcgccctgctgggaggctctggccccatgtcgggacccagtccgcggaat
caggcaggtccagagaccgatgacgatgacagcgagggcgatgaaaggacaccagggtcc
tctcgaaagtcaaagcgagctgctgactccatgaacgagaccgtggaagctatggatgtg
attgccctttcctgccccaaatacaaggaccggccgcaaatcgctcgagtcatccagaag
aactccaacggatacagcatccactggatggccggctcctactcgggcccgtgggccgag
gccaagaaacgcgacggccgcaaactggtgccttgggtggacactattaaggaatcggac
ataatatacaagaagattgccttgaccagcaaccacaaactgagcaacaaagtagtacag
actttacgctcactgtatgcagcgcgggaagggggagccagctaa
DBGET
integrated database retrieval system
