Gasterosteus aculeatus (three-spined stickleback): 120830604
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Entry
120830604 CDS
T07457
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120830604 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120830604 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120830604 (pdlim2)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
DZR
Motif
Other DBs
NCBI-GeneID:
120830604
NCBI-ProteinID:
XP_040051313
UniProt:
A0AAQ4PJ01
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All DBs
Position
13:complement(12211600..12239504)
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AA seq
363 aa
AA seq
DB search
MALTVNLIGPSPWGFRILGGRDFKKAITVSKVTGASKADQADLQPGDIILAINGKNTADM
LNVEAQNTIKNSKTQLQLVVERPEPPSSGRTNGISTPEQLTGRFQEAVIVSRDENQNYKE
YTISSPASPGPYSQDPFISQGVKRESLTPSPNKSVLLRPWSPEEKSHRLSRPLSQEFSPS
DYRSNSVSSRTPTPPGRYSPHSPIDQDVPMSPRRSSSSSDSAMQKFDRESEVYKMIQENK
ESRTAPRQSNTFKMLQEVLEADEKEAAQKFPGLLSPNSPIQSVGGVKKNHTCEKCGTGIL
TLAVRIADDRYRHSECYTCTDCGLNLKMRGHFCVGDVMYCEKHAKQRYQGPGSSPQATVS
PRQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcactgacggtgaaccttatcggtccttcgccatggggcttcagaatacttggagga
cgggacttcaagaaggccattactgtgtcaaaggtcaccggggccagcaaggcagaccag
gctgacctgcaacctggggacattatcttggcgatcaatgggaaaaatacggccgacatg
ctgaacgtggaggcccagaacacgatcaagaactcaaagacccagctgcagctggtagtg
gagagacctgaacctcccagttctggacggactaacggcatcagcacccctgagcagctc
acagggcgcttccaggaggcggtgatagtgagtagagatgagaaccagaactacaaagag
tacacaatctccagccccgcgtcccctggaccttattcacaagatccttttatcagccaa
ggtgtaaagagggagagcctgacaccgtcccccaacaagagtgtcctgttgcgtccatgg
tctccagaagagaaaagtcacaggctgtccagaccgctgtcacaggagttctccccttca
gactacaggagcaattcagtgtccagcagaaccccgacgccaccaggacgctactccccc
cacagccccattgatcaggacgtacccatgtcccctcgtcgaagcagttcgagctctgac
tctgccatgcagaagtttgacagggaatccgaggtgtacaagatgattcaggagaataag
gagtcccgcacggcgcctcgtcagtccaacacttttaaaatgctgcaagaggtcctggag
gctgatgagaaagaggcggcccagaagttcccaggactgctttcgcccaactcgcccatc
caatcggtgggaggcgtgaaaaagaaccacacctgtgagaaatgcggcaccggcattctc
acactggccgtgcgcatcgcggacgaccgctaccgccattcagagtgctacacttgcaca
gattgtggtcttaacctcaagatgagaggtcacttttgcgtcggcgacgtgatgtactgc
gagaagcacgccaaacagaggtaccaaggcccaggaagttctcctcaagccacagtgtcc
ccgcgccaatga
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