Gasterosteus aculeatus (three-spined stickleback): 120830636
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Entry
120830636 CDS
T07457
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120830636 (tmc1)
03037 Cilium and associated proteins [BR:
gat03037
]
120830636 (tmc1)
Transporters [BR:
gat02000
]
Other transporters
Pores ion channels [TC:
1
]
120830636 (tmc1)
Cilium and associated proteins [BR:
gat03037
]
Other cilia and associated proteins
Stereociliary proteins
120830636 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Motif
Other DBs
NCBI-GeneID:
120830636
NCBI-ProteinID:
XP_040051360
LinkDB
All DBs
Position
XIII:12956134..12963669
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AA seq
948 aa
AA seq
DB search
MPQDSLITSENDIDLVLEFEGDDSSYQKEHRRQRHREKRVDGDIVRRKRGNERRKGASRA
EEGESQTRPERIDRGRRKRTRSHQDTKGSEGDEEVQPKIQSGRAAKTRKHTKNEKTRKKE
EEEKAEKGEGKERHGKRKKTSASKKEREEVGGKHTMKEKAQEVKRKKHMKVVETSPEPSE
EDDIDEEVDEEEEVRPESLSSEELEKLKEAVDERKKLIQALRGKPWPIKKKCVILRESQE
FVEKYEGALGKGKGRKLYAYKVLMSKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSV
ASYFIFLRWMYGINMILFCLTFGLVMVPEALMGRPYGTIPRKTVPRAEATSAMDFAVLWD
FGGYAQYSVLFYGYYNNQRAVGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANESGV
GDDNSFNFNWRMFTSWDYLIGNPETADNKFASITTSFKEAILEEQESQKDDNIHLTRFLR
VLANFLVLCCLAGSGYLIYFVVRRSQKFALDGLENHTWWERNEVNMVMSLLGMFCPMLFD
VISALENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINLKREEENIIKFNITVWEAS
LFNGTVSVNSTAPPVTIEPADVPRGPCWETMVGQEFVRLIISDTMTTYITLLIGDFLRAV
LVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVS
MYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFS
GKQRMFDVIQETLESDFPAWFGKVFSYASNPGLVLPFMLLMVLAIYYLQSTSKSYKEANM
ELKKKLQTQNEENKKKNKLAALKAQMDLEEARKGSSRTAQQQKNSPSLQDQETEQMKKKT
TEIVRGYIVVKMDATLLIQLENEEANFQPPEPLSPGPIAMVTKGLLVS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagacagtttgatcacttctgagaatgacattgaccttgtactggaatttgaa
ggtgacgattcatcttatcaaaaggaacacaggaggcaacgacacagagaaaaaagagtc
gacggtgatatagtgagaaggaaaagaggaaatgaaaggagaaaaggagcatccagagca
gaggaaggggaatcacagaccaggcctgagagaatagacaggggaaggaggaagagaaca
aggagtcatcaagatacaaaggggagcgagggggatgaggaggtgcagcccaaaatacaa
agtggtagggctgcaaaaacaagaaagcacacaaaaaatgaaaaaaccaggaaaaaggag
gaagaggagaaggcggagaagggagaaggcaaagagagacatggcaagagaaaaaagacg
agtgccagcaaaaaagagagagaagaggttggaggtaaacatacaatgaaggagaaagca
caggaagtgaagaggaaaaagcacatgaaagtagttgaaacaagtccagagccaagtgag
gaagatgacattgatgaagaggtcgatgaggaagaagaggtgaggccagagtctctctca
tcggaggagctggagaaattgaaggaggccgtggacgagaggaagaaactgatccaagct
ctgaggggaaagccttggccaattaaaaagaaatgtgtgatattaagggagtctcaggag
tttgtggaaaaatatgagggagctttaggaaaagggaaaggcaggaaactctacgcatac
aaggtcctgatgagcaagaaatggatgaagtttcaacgtgactttgaaaacttcaaaact
gcctgcattccgtgggagatgaaaatcaaggagattgaaagtcactttggctcctcagtt
gcctcttactttatctttctccggtggatgtatggcatcaacatgatcctgttttgtctc
acctttggtcttgttatggtaccagaggcattaatggggagaccatacggcaccattcca
agaaagactgtcccccgagccgaggcgaccagtgccatggactttgctgtcctttgggac
tttggaggttacgctcagtattcggtcctcttctacggttactacaacaaccagcgagcc
gttggctggctcaagttccgcatgcctctgtcgtacttcctggttggtgtgggaacagtg
gcctatagctatatggtggttataagaacgatggcccggaatgcaaatgagtcgggagtc
ggagatgataacagctttaattttaactggcgaatgttcaccagctgggactacttgata
ggaaaccctgaaacggcagacaataagtttgcctccatcaccaccagtttcaaggaggca
attttagaggagcaggagagccaaaaggatgacaacatccatttgactcgtttcctgcgt
gtgctggccaacttcctggtcttgtgctgcttggcgggaagtggatacctcatctacttc
gtggtgcgccgctctcagaagtttgccctcgacggtctggagaatcacacctggtgggaa
aggaacgaggtgaacatggtcatgtcattactggggatgttctgcccaatgctatttgat
gtcatcagcgccctggagaactaccacccccgcgtcgccctgcagtggcagctgggtcgc
atctttgccctcttcttgggtaatctttacaccttcatcattgcgctcatggatgagatc
aacctcaaaagggaagaggaaaatataataaagttcaatataaccgtctgggaagccagt
cttttcaatggcacagtatcagtaaacagcacggctccacccgtcactatcgagcccgct
gatgtgcccagagggccctgctgggagaccatggtgggccaggagtttgttcggctcatc
atatctgataccatgacaacttatatcacgctgctgatcggtgacttcctgagagccgtg
cttgttcgtttcctcaactactgctggtgttgggatctcgaggctggatttccttcctac
tctgagtttgatgtcagtgggaacgtactgggcctaatcttcaatcaagggatgatatgg
atgggtgctttctatgccccctgcctacctgccctgaatgtcctccggctccacgtgtcc
atgtacctgcagtgctgggccgtcatgtgctgcaatgtgccccaggaaagggtcttcaag
gcctctggctccaacaacttctacatggccatgttgctggtcatcctcttcctttccact
ctgcctgccatctacaccatcgtcaccatccccccttcctttgactgtggacccttcagt
gggaaacaacgtatgtttgatgtgatccaggagactcttgagtcggacttccctgcctgg
tttggcaaagtgttcagctatgcctccaaccctggactggtgctgcccttcatgctgctt
atggtattggccatttactacctgcaatccacatccaaaagttacaaagaagccaatatg
gaactgaagaaaaaactacaaacgcaaaatgaggagaacaagaaaaagaacaaactagca
gcactgaaggcacaaatggatctagaagaggccagaaaaggttcatctcggactgcacag
caacaaaaaaacagtccttcactgcaagaccaagagacagaacagatgaagaagaagacc
acagaaatagtcagaggctacatcgtagtaaaaatggacgcaacactcctcattcagtta
gagaacgaggaggccaatttccaacctccggagcccctgtcgccaggcccaatcgccatg
gtaaccaagggactcctggtttcctaa
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