Gasterosteus aculeatus (three-spined stickleback): 120830645
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Entry
120830645 CDS
T07457
Symbol
sema6a
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120830645
NCBI-ProteinID:
XP_040051375
UniProt:
A0AAQ4R8K3
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Position
XIII:complement(4716348..4807517)
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AA seq
1030 aa
AA seq
DB search
MRCEALLLYFTLLHIAGAGFPEDSEPISISHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
IMIMNRTLYIAARDHIYTVDTDTANGDEIFFSKKMTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQQNDDALFVCGTNAFNPSCRTYKMDTLEALGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDSVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFFREIA
MEYNTMGKVVFPRVARVCMNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMAEVANTFTGRFKEQKSQDSTWTPFPEDK
VPKPRPGNCAGTASMERYKVSNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIVVDNKAGPHSNQTVVFLGSEKGIIVKFLANMNSGFLNDSVFLEELNVYNPDKCSIDG
VEDKRIVGMQIDSKSHALWVAFTSCVVKVPLSRCERHGRCKKSCIAARDPYCGWVSEGAC
RQVVGNTKSAFEQDVEHGNTDGLGDCQNTFVALNEVPSGDEGHHHRHHHRTLSLPTSALP
EAAEGPLGRGRMVERKDSSMSSDKGEDSYVAVLSQTQPEANGVIRESYQKGRDQLVPVTL
LAIAVILAFAMGAIFSGIIVYCVCDHRRRDVDLTGRKAKDTHHHLRRGSMNSVTKLTGLF
ETQAKDGRPEAILTPLMHNGRLTANGKMLIKADQHHLDLTALPTPESTPMQPRRKPSRGS
REWERNQNLINACTKDMPPMGSPVISTDLPLRASPGHIPSVVVLPLPQHQHQLQPHLQQH
QQSYQHEYVEQPHHSDLGMGHGVMDDQGATLEYKTVKGPCHGLSMVDPDGVMPPRVPQRE
ASLTVPPAVPQMGKRLEVHSSVYGLRKGSASGASGSSGSSALKRHNTNSSNSSHLARHHS
FNRVETPPPAPQRVDSIQMTAQGVSLSRQPGMSSYGSLPRTGLKYLKPDVPPKPSAVSLS
TKVKSSDSCT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtgaggccttgttactttacttcacgctactgcacatcgccggggcgggcttc
cccgaggacagcgagcccatcagcatctcacacggcaactacacaaagcagtacccggcg
ttcgtaggccacaaaccgggcaggaacaacacgcagcggcacaaactggacatccagctc
atcatgatcatgaacaggacgctgtacatcgcggccagggatcacatatacacagtggac
acggacaccgccaacggtgacgagatctttttcagtaagaaaatgacatggaagtccaga
caggcagatgtggacacttgcagaatgaaagggaaacataaggatgagtgtcacaacttc
atcaaagttctcctgcagcaaaacgacgacgctttgtttgtgtgtggcacaaatgctttc
aacccctcctgtcggacctacaagatggacaccctggaggctctgggcgaggagatcagc
gggatggcacgctgcccgtatgacgccaagcacgccaacgtggcgctcttcgctgatggc
aagctgtactcggccaccgtgacagacttcctagcgatcgattcggtcatctatcgtagc
ctgggagacagcccgactctgcgcaccgtcaagcacgactccaagtggctgaaagagccc
tactttgtccaggcagtcaattacggggacttcatctacttcttcttccgggaaattgct
atggagtacaacacaatggggaaggtggtgtttccccgagtggccagggtgtgtatgaac
gaccgaggcggctcgccccgtgtcctggagaagcagtggacctcgtttctcaagtctcgc
ctgaactgctccatccccggcgactcgcacttctactttaacatcctgcaggccgtgaca
gatgtcatccacatcaatgggagggacgtagtgatggcgaccttctccacaccttacaac
agtatcccaggctcggcggtgtgcgcctatgacatggcagaggtggccaacacgttcaca
gggcgtttcaaagagcagaagtcccaagactccacctggacgccgtttcctgaagacaag
gttcccaagccaaggcctggcaactgtgccggcactgcatccatggagaggtacaaggta
tccaacgagttcccagacgacacgctcaacttcatcaagatgcatccgctgatggacgag
gcagtaccctccatcgccaacaggccctggttcctcaagaccatggtccggtatcgtctg
acccgcatcgtggtggacaataaagcgggtccccatagtaaccagacggtggtcttcctg
ggatcagagaaaggcatcatcgtcaagttcctggccaacatgaacagcggcttcctaaac
gatagtgtgtttctggaggagcttaacgtctacaacccggacaagtgcagcatagacggc
gtggaggacaagcgcatcgtcggcatgcagatcgacagcaagagtcacgctttgtgggtc
gccttcacctcctgcgtggtgaaagtgccgctgtctcgctgtgaaagacacgggagatgc
aagaagtcctgcatagccgccagagacccgtactgtggttgggtgtcggagggagcctgc
agacaggtggttggtaacacaaaatcggcctttgagcaggacgtggagcatggtaacaca
gatggcctgggagactgccaaaacacctttgtggcgctgaacgaggttccttccggtgac
gaaggccaccatcaccgccaccatcaccgcaccctctccctccccacctcggccctgccc
gaggcggccgagggccctctggggcggggccgcatggtggagcggaaggactcctcaatg
agctcagacaaaggggaggactcctacgtagctgtgctctctcagacccagcccgaagcc
aatggtgtgatccgtgagagctaccagaagggtcgtgaccagctcgttcccgtgaccttg
ctggccatcgccgtcatcctcgcctttgccatgggcgccatcttctccggcatcatagtc
tactgcgtctgcgaccaccggcggcgggacgtcgacctgacgggccgcaaggcaaaggac
acgcaccaccacctccgccggggctccatgaacagcgtgaccaagctgacgggcctgttc
gagacgcaggccaaagacggacgccccgaggccatcctcacccctctgatgcacaacggg
aggctgacggccaacgggaagatgctgataaaagccgaccagcaccacctggacctcact
gccctgccgacgcccgagtccacccccatgcagccgcgtcgcaaacccagcaggggcagc
cgcgagtgggaaaggaaccagaacctcatcaacgcctgcaccaaggacatgccgcccatg
ggttcgcccgtcatctccacggacctgcccctgagggcctcgccgggccacatccccagc
gtggtggtcctgcctctgccgcagcatcagcaccagctccagcctcacctgcagcagcac
cagcagtcctaccagcatgagtacgtggagcagccccaccacagcgacctcggcatgggc
cacggcgtcatggacgaccagggggccaccctggagtacaagacggtcaagggcccctgt
cacggcctcagcatggtggatccggacggggtgatgccgccgcgcgtgccccaacgagag
gcctcgctcaccgtccccccggccgtcccgcagatgggcaagcgcctggaggtccactca
tcggtgtacgggctgcggaagggatcggcgtccggcgcgtccggatcgtccggatcgtcc
gccctcaagaggcacaacaccaactcgtccaactcctcccatttggcgaggcaccacagc
ttcaaccgcgtggagacgccgccccctgcgcctcagagggtggactcgatacaaatgaca
gcacagggcgtgtctctgtcacggcagcccggaatgagctcctacgggtcactgcctcga
acgggcctcaaatatctcaagcccgacgtccccccgaaaccctccgcggtctcactgtca
acaaaagtcaagtccagtgactcctgcacatag
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