Gasterosteus aculeatus (three-spined stickleback): 120830741
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Entry
120830741 CDS
T07457
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120830741 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gat03310
]
120830741 (rorb)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120830741 (rorb)
Nuclear receptors [BR:
gat03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120830741 (rorb)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
120830741
NCBI-ProteinID:
XP_040051550
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Position
XIII:13061177..13081713
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AA seq
472 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQARLLEQRQQQTGEAEALAR
VYSTSLTNGLSTLNHEIGGTYANGHVIELPKAGHGNGGGVQGGYYGMDSTQPSPDQSGLD
MSGMKHIKQEPVYDLTPVPNLFSYGGYQDSQLGPNNVSMGELDRIAQNIIKSHLETCQYT
TEELQQLAWQTHSYEEVKMYQSKPRDVLWQQCAIQITHAIQYVVEFAKRISGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNSAMAMPK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtcataccttgcaaaatctgcggagacaaatcatcaggcatc
cactacggagttatcacatgtgagggatgtaagggtttcttcagacggagtcagcagaac
aatgcgtcctactcctgcccccgccagaggaactgcctcatcgacagaacaaaccgcaac
cgatgccaacactgccgcctgcagaaatgtctcgccctcggaatgtccagagacgctgtg
aagtttggtcgcatgtccaagaagcaacgcgacagcctatatgcagaggtccagaagcac
caggcgcggctgctggagcagcggcagcagcagacgggcgaagcggaagctctagcacga
gtttactccaccagcctgaccaacggactgtccaccctcaaccatgagattgggggcacc
tatgccaacggtcacgtcattgagctgcccaaggccggccatggtaatggaggtggagtc
caagggggatactatgggatggattctacccagccatctccagaccagtcgggtttggac
atgtcgggcatgaagcacatcaaacaggagccggtgtacgacctgacgccagtgcctaac
ctgttcagctacggaggttaccaggacagtcagctgggacccaacaacgtcagcatggga
gagctggaccgtattgctcagaatatcatcaagtcccacttggagacatgtcagtacacc
acagaggagctgcagcagttagcctggcagacacactcctacgaagaggtcaagatgtac
cagagcaagcctcgggacgtgttgtggcagcagtgtgccatccagatcacccacgcaatc
cagtacgtggtggagttcgccaagcgcatctcagggttcatggaactgtgccagaacgac
caaatcctgctgctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagggcg
ttcaaccctctcaacaacacggtgctctttgaagggaagtacggaggcatgcagatgttc
aaagctctcggttgtgacgacttagtgagtgcagtgtttgactttgccaagagtttgtgt
tcactgcagctgacagaggaggagatcgctctgttctcggcagctgtactcatttccaca
gatcgcccgtggctaatggagcctcggaaagtccagaagctccaggagaagatctacttt
gctctgcagcacattatgcagaaaaaccacatggacgaagatgcattggcaaagctgatc
agccgaatcccgacgttgtccgccctgtgcacgctgcacaccgaggagctccaggccttc
cagcagctgcacccagaaaccgtcaacgtcctcttccctccgctctacaaagaactcttc
aaccccgaccccaactccgccatggccatgcccaagtga
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