Gasterosteus aculeatus (three-spined stickleback): 120830780
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Entry
120830780 CDS
T07457
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120830780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120830780
Membrane trafficking [BR:
gat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120830780
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120830780
RAVE complex
120830780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_WDR19_2nd
Beta-prop_VPS8
Beta-prop_SPT8
VIR_N
Motif
Other DBs
NCBI-GeneID:
120830780
NCBI-ProteinID:
XP_040051612
LinkDB
All DBs
Position
13:4819862..4866703
Genome browser
AA seq
3098 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVILGSDFERLQIIPGAKHGNIQV
CCVDCSLQGGKIAASYGSIVCVFEPVQPPDQKDTSLTKLNCQWQKTGQFLLKSMVRNLAW
HPTGSTLLTGSSSLQLWSNVAGVRDEAEEVETQAEMTMESHSAWRCIWQSKMASQVSLMK
FSPDGEFFATAGQDDCLVKIWYNTSKWKLGVSKLFTPPEPCGQGELAFSFVYLAHPRSVT
GFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDGLLSGYHNNHASGQHGATPG
CAGNTCNRKLHGSTAQEVSYSNLNFQESLHGSFYRDVLQPSMTGCLPHNQSRHDSHKRSR
SSMPHANALCHFHIAASINPATDIPLLPSISSLSSVDDEEPGGPFTVHWLNNKELHFTLA
MEVFMQQLRGSLEQQDECSHEVPDEEDNFDEEDNNCRPGDSQAPEAAELPLAAVKHQVDV
LLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTGDAIS
LSHSVVMYACNKNVDLAIQHGRQRPPGSTLPQAKSPLISYGGQGKAAPSSSLRLSIFTPN
VLMISKHADGSLNQWAVGFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTS
HHNALRTPEADSILAPPDAYSCGFAHPAFIPRGSRPGRGTLGAVSQDPNAIYSELILWRV
DPVGPLSLSGGVSELARINSLHASAFAQVAWLPTFIPSSCLGVYCNSPSACFVASDGHSL
RLYQAVIEAKKLLSELSNPQISKYVGEVFNIISQQSTAKPGCIIELDTITDFQGKETQLL
HVFEEDLILGSERMESTLPTPDPLHTASSQAAFSARFFLVVVELTPTGRSLLHMWHLHLA
ARPITMEETTKEMDATLASSMNSSTFSFDTFSSPAAQKSKPCTSNLQSACRLSLTTHRLY
SHEMALPEGVEAISVTPSAGHLSASCSLPVDRVPYLLATSCSDGKVRFWRCNVIATDPFS
MDSLVYHWEEWPLLVEENLPNCSAVSVQGRPIQVSCCHSGRIAVAYRETASPLLNATPYL
TSDQLLSSPPALASSPYVHNNTNTHMTPTLTVQRSPNLPPSPKAANLREPLVHIGIFQCE
STGGSQWHLEQTIVLDSADPTIASASIPGNVDIPVTNEDCLGSTRKSLVHLDWVSQEDGS
HVLTVGIGTKIYMYGRLSGKPPELGLMSDASREQSSSRMVLIRSVNLVSSVEGSLPIPVS
LSWVRDGILVVGMDCEMHVYSQWQPPAPSRPNAPIAQDTDISSSLSSIISAIRQSQEDPS
SGAAMSSLAPPKRALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTLPQYHP
VQLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTTSHEKRVRSRTISAGGSTARDRK
MFTKAENSIPDYTEISSIPPLPLYALLAADEDTSPKPDNVSSVGGDSGHGSSHTDVYDEL
FHTPTIGDLDPLHDDQEETGNKVIDLSQYSPTFFGAEHAQVLSSHLLNSSLPGLTRMEQM
SLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSVPPAHRAQLLR
QGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRCMEKVA
KTSLQKNNDPLDAAIFYLALKKKAVVWGLYRSQKNAKMTEFFRNNFSEDRWRKAALKNAF
SLLGKQRFQHSAAFFLLAGSLKDAVEVCIEKMQDLQLALVISRLYESEFETTSTYKKILQ
RHVLGQDKQVGNIQAHQDPFLRSMAHWVLEDYSRALDTLLEHPANSTRSASTGTKCDAGY
SAETTCNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERTLFFTAA
YSHLQAGCPMLALEVLSKMPKVRKHSELPNQGDAGAAAELSVGSKNGETSNQGWSQQTLN
GYESDGNCLSNSRSDSVLSFDWSQQSITHADEPLELKWDSDKDGEDDVDEEETKNVDSSH
VFQNPEDATSPLAEVLMGEVREDCNDFLPPSNDILAAQLKFTACLKIMTNELRTLSTGYE
LDGGKLRCQLYQWLEREVVALQRCCSYKPCLPELSFQGDAPVSGLVEDERPGSPHGDSQR
SRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQDDSTQPVVPCGQPT
SIPLLMACTSNVKTVVANPLVYLTNLAHDILKTINSFDSPPHPDVVNNEIYVMHTLAASL
SACIYQCLCDGHTHSHVNQFTGIVYQSVLLSLKQPLRTVSMDESVQPNTSPAQWPGIASL
IRLLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIGAHPLNGKLWVAVF
GGGARTPVIGKPNSPTKTPPPASPSGSDRKSRRFRFLSSRSGSREESGINHPSSPKHGPV
VEQEAASIFKERFVPPELSIWDYFIAKPLLPPSEDRIEYDSEESQGSQDEEEDDNEYEDV
FDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLDLPVGSPLCHAVLKT
LQRWEQVLQKRLEIFGGPPSKYISTPLQDETAAPGPALLRHKALFEPSNTPFRTSHHSAL
PVKRLWQFLVKQEEVQETFIRNIFTKKRGLNESGEDQTDNMKLSGMEETGNNQTESNLGS
PGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILATQILTWIDDDDAEV
KGVTSDDFLVVHARDDFAALHGTTPYTHSSPGTPINMPWLGGVQTGRGAAVMIKRNINNV
RRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDA
DGGLSLWQTNTSGNAPKPYLTLQCHNKTAHDFVFVGSSSLIASAGLSTDNRNVCLWDTLV
TPANCLVHAFCCHESGATVLSMASRQQLLITGGRKGWISVLELAHKHQRQSFQAHDSPVK
ALAVDPTEDCFISGSAEGNIKIWSLATQCALYTFPNEHARQSLFRNLGTGVMQIEVGPTN
HIFSCGADGTMKMRVLPNRFSIINNNNNDLKNDVKFII
NT seq
9297 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggagccgtcaaccctggagacaattgtttttctgtg
gggagcgtcaacaatgtgccattcacggcctatgcgtcaggttgtgacgtggtgattttg
ggcagcgactttgagcgactgcagatcatccccggggccaaacatggcaacatccaggtc
tgctgtgtcgactgctcgctgcagggtggaaagattgcagcttcctatggcagcattgtg
tgcgtctttgagcctgttcagcctccggaccaaaaagacacttctctgacgaagttgaac
tgccagtggcaaaagactggtcaatttcttttgaagtccatggtacggaacctggcctgg
cacccgacaggcagtacgctcctaacgggctctagtagtctccagttatggtctaatgtt
gctggagtgagagatgaagctgaggaagtggaaacgcaggctgaaatgaccatggagtct
cattctgcctggaggtgcatctggcagagcaagatggcatctcaagtcagtttaatgaag
ttctctcctgatggggaattctttgctactgccggtcaagacgactgcctagtcaagatc
tggtacaacaccagtaagtggaagttgggtgtttccaaactcttcacccctccagaacca
tgtgggcagggagagctggccttttccttcgtctacctggcccatccccgttctgtgact
ggcttctcatggaggaagaccagcaagtacatgccacgaggcgccgtgtgtaacgttctg
ctcacctgctgtaaggacagcgtgtgtagactctgggcagagacgctcctgccgggtgac
ggcctcttgtctggttaccataacaaccacgcttctggccaacacggtgccacacccggg
tgtgctggcaacacctgcaacaggaagctgcacgggagtacagcacaagaagttagctac
tctaatttgaactttcaagaatccttgcatggctccttttaccgggacgtcctgcagccc
tccatgactggttgtctgcctcacaatcagagcaggcacgacagccacaagaggagccgc
agcagcatgcctcatgccaacgctctctgccacttccacatcgctgccagcatcaacccc
gccacagacattccactgctgccctccatctcctctctgagttctgtggatgacgaggaa
cctggaggtccgtttactgtccactggctcaacaacaaggagcttcacttcaccttagcg
atggaggtcttcatgcagcagctcagaggcagcctggagcaacaggacgaatgctcccat
gaagtgcctgatgaggaggataactttgatgaagaagataacaattgcaggccaggtgac
tcccaggcacctgaggctgcggagcttcccctggcagcagtgaagcaccaggtggacgtg
ctgttagaagagtggaataaaggggcagacatgctgttcagtatccatcccatggacggc
tctcttttggtctggcatgtcgactggttggatgagtaccagccaggcatgttcagacaa
gctcaggtgtcgtttgtgtcccgtataccggtagcgttccctacaggcgatgccatctcc
ttgagccacagtgtggttatgtatgcctgcaacaagaacgtggatctggccatccagcac
ggccgacagcggccacccgggagcacattgcctcaagccaaatctcctcttataagctac
ggcggtcaaggaaaagccgcacccagcagtagtcttcgattaagcattttcaccccaaac
gtcctcatgatttccaaacacgccgacggatccctgaaccagtgggccgttggctttgca
gaggactccgctttctccactgtgctcagcgtctcccacaagtcacggtactgtggccac
cgcttccacctgaatgacctggcctgtcactcgttgctgcctctgctcctgaccacctcg
caccacaacgccttgaggacgccagaggcagacagcatcctggctcctccggacgcctac
tcctgtggtttcgcccatccagcatttattccccgggggtcccgacccggccgggggacc
ctgggtgccgtgtcccaggaccccaatgcaatctacagtgaactgattttatggagagtg
gaccctgtcggcccgctgtctctgtctggtggggtctcagagcttgcccggatcaattcc
cttcatgcatcggcgtttgctcaagtagcctggctgcctacattcatccccagcagctgt
ttaggtgtttattgtaactctcccagcgcctgttttgtggcaagtgacggccactcactc
aggctgtatcaggctgttattgaagcgaagaaactactgagtgagctctccaatccacag
atatcaaaatatgttggggaggtctttaacatcatcagtcagcaatccacagcaaaacca
gggtgtattattgagctggataccattactgactttcaggggaaggagacgcagctcctg
catgtttttgaggaggatctgatcctcggcagtgagcggatggagagcactctgccaact
cctgatccacttcacactgcctcaagtcaggcggcgttctcggcacgtttttttctcgtc
gtggtcgaattgaccccgacgggtcgctcgctcctccacatgtggcatctccatctcgca
gcgcgaccgatcaccatggaagagactactaaggagatggatgcaaccttagcgtcttct
atgaacagctctacatttagctttgacacgttcagttctccagcagctcagaagagtaaa
ccctgcacttccaatctgcaaagtgcctgtcgccttagcctcacaacacacaggctgtac
agccatgagatggctctgcctgaaggggtggaagccattagtgttacaccctcagcaggt
cacctgagtgcgtcatgttctctgccagttgatcgtgtaccctacctcctcgctacctcc
tgttctgatggaaaggtgcgcttctggaggtgtaacgtaattgcgacagatcccttcagt
atggacagcttggtttaccattgggaggagtggcctttactggtggaggagaaccttccc
aactgtagcgcagtaagcgtgcaaggtcgtcccatacaggtcagctgctgccattctgga
cggatcgcagttgcctacagggagacggccagcccgcttcttaacgcaacaccttatctg
acctctgaccaactattgagttctcctcctgccctcgcctcctcgccttatgtgcacaac
aacacaaacacccacatgaccccgacgctgacggtgcagcgtagtcccaatctccctcca
agccccaaagcagcaaaccttagggagccattggtccacatcggcatcttccagtgcgag
tccacaggtggttcacagtggcatctagaacaaaccattgtcctggacagcgcagacccc
acaatcgctagcgccagtattcctggtaacgtggacatccctgtcactaacgaggactgc
ctcggttctactcgtaagagcctggttcatttggactgggtttcccaagaagacgggtca
catgttctgactgttggtattgggacaaagatttatatgtacggccgtctctccgggaag
cctcctgaactcgggttgatgtctgatgccagcagagaacagagctcttcacgcatggtc
ttaattcgttcagtcaatctggtctcctcagtcgaaggctcgttacctattcccgtctcc
ctctcctgggtaagagatggcatcttggttgtcggcatggactgtgaaatgcacgtgtac
tcccagtggcagcccccagcaccatccagacccaatgccccaattgctcaggacacagac
atcagcagcagtctctcctctattatctcggccatcaggcagagccaggaggatcccagc
tccggggccgccatgtcttctctcgcccctcccaaaagggccttgacgagatcaatgatg
agccttgctcagaaacttagtgggaagagaacagcttatgacctgcctgtcgagatggag
gattctgggctttttgaagctgctcaccaactctttcccactctgcctcagtaccaccct
gtacagttactggagctcatggatctagggaaagttcaccgtgccaaagccatcctgtcc
cacctggtgaaatgcattgctggagaaattgtggcactaaaagacagtaccaccagtcat
gagaaacgtgtgcgctctcgaacaatcagcgctggaggaagcacagccagggatcggaag
atgttcactaaagcagagaactccattcctgactacacagagataagctccatccccccc
ctgccgctgtacgccctgctggcggccgatgaggatacatcaccaaaacctgataacgtg
agcagtgtcggtggagatagtggacatggctccagtcacaccgatgtttatgacgagctc
tttcatacacccaccatcggggacctggatcccctgcacgacgatcaagaggaaactggg
aacaaggttattgacctgtcccagtacagtcccacattctttggtgcagaacatgcacag
gttctgtccagtcacctgcttaattccagtttgccgggcttaacccgtatggagcagatg
tctctcatggctctggctgacaccatcgctaccacaagcaccgacctcaaggacagccag
ggcaaaagcaaaggtggagaaactctggacgagtgtggtctgaagttcctgctggccgtc
agactccacactttcctctctacctcggtgcctcctgcacaccgagcacagctgctgagg
caaggcctgtcaacatgtcactacgcctgggctttccactctgaggccgaggaggagctg
ctgaacatgctgcccgccctacagaagggagagccaacctggcctgagctgcgctccatg
ggcgtgggctggtggctccgcagcaccaacaagctgcgcaggtgtatggagaaggttgcc
aagacgtctttacaaaaaaacaatgatcctctggatgcagctatattttacctcgcgctg
aagaaaaaagcagtggtctgggggttgtacaggtctcagaagaatgccaaaatgacagaa
ttcttccgcaacaacttcagtgaggaccggtggcggaaagcagcattgaaaaatgcgttt
tctctgttgggaaagcagcggttccagcattctgcagccttcttccttctagccggctcc
cttaaggatgctgtggaggtgtgcatagagaaaatgcaggacctacagcttgcactggtg
atctccagattgtacgagtctgagtttgagacgacatccacctacaaaaagatccttcag
agacatgttctgggacaggacaaacaggttggcaatattcaagcccaccaggacccgttc
ttgcgcagcatggctcactgggtcctggaggactacagcagagccctggacactctactg
gagcacccagctaacagcaccagatccgcctctactgggaccaaatgtgatgcaggttat
tctgctgaaactacctgtaacccagaggttttcaacttttatacctaccttcggacccac
ccactcctcctccgtcgccattttggctcctcggacaaggctaaggttggactgacggcc
gaggggcgcagagccgactccattagcctggaagagaggacgctctttttcacagccgcc
tactctcatcttcaagccggctgccccatgctagccctcgaagtcctttccaagatgccc
aaagtccgcaagcattccgagctacccaaccagggcgatgcaggcgcggcggctgagctt
agtgttgggagcaagaacggagaaacctcgaaccagggctggtcccagcagactctgaac
ggctacgagtccgacggaaactgcttatccaacagccggtcagattccgtgttgagtttc
gactggagccagcagtcaatcactcatgcggatgagccactggagctgaagtgggacagt
gacaaagatggagaagacgatgtagatgaagaagaaaccaaaaatgtggacagcagccat
gtgttccagaacccggaggacgccacgtcgccgctagcggaggtgttgatgggggaggtc
agggaggactgcaatgacttccttcctccgtctaatgacatcttagcagctcagctgaag
tttacggcctgcttgaagattatgaccaatgagctacggacgctgtcaaccggttatgaa
ctggatggcggcaagctgcgttgccagctctaccagtggttagagagagaggtggtggct
ctccagcgttgctgcagctacaagccgtgcttgccagagctgtctttccagggtgatgcc
cccgtttctgggttggtggaggacgaacggcctgggagtcctcatggtgacagccagcgg
agcaggagacactggctgcagagtaaccagcccctactgaggatgtttctcagctactgc
agcctgcatggctcccacggtggaggacttgcctctgtgcgcatggagctcattttactg
cttcaagagtctcaccaggatgactccacccagccagtggttccgtgtggtcagccaact
tccatccccctcctgatggcgtgcacctccaacgtaaagactgtggtcgccaatcccctc
gtctacctgaccaacctggctcacgacatcttgaagaccatcaattcgttcgactctcct
ccacatccggatgtggtcaacaatgagatctacgtgatgcacacattggctgcctccttg
tccgcctgtatatatcagtgtctgtgtgatggacacacccacagccatgtgaaccaattc
acaggaatcgtgtatcagagtgtgttgctatctctgaagcagccgctcagaaccgtcagt
atggatgagtccgttcagcccaacacctcccctgcacagtggccaggtatcgcctctctg
attcgtctgttgagctcagcaggggaggagagccaaccgggcttaaccgtgctgctctgc
gagatcctgactgccgtcttcctcagtctgtttgttcacggcatggccactcactccagc
aacgagctgttccgcattggggcccacccgctcaacggcaagctctgggtggcggtgttc
ggagggggcgcccggacccccgtcatcgggaaacccaacagcccgacgaaaaccccccca
ccagcctcaccaagcggctcagacaggaagtccagacggttcaggttcctgtcgtcacgc
agtggatccagggaagagtctgggatcaaccacccatccagccccaagcacggccctgtt
gtggaacaagaagctgcctccatctttaaagaacgattcgtccctccagagctcagcatt
tgggattacttcatcgccaagcccctgctgccaccatcagaagaccgaatcgaatatgac
tcggaggagagccaaggtagtcaagatgaagaagaagatgacaatgaatatgaagatgtg
tttgaccccagctctccgcaaagagaacactctaatcacaattcatacagttggtgtttg
atgcgactcgctatggttcagctcgtgttggtcaacctcaagtccttttacccaatggca
ggatatgatctattagatctgcctgtgggctctcccctctgtcacgctgtgctgaagacg
ctgcagcgatgggagcaggtgctgcagaaaaggctggagatcttcgggggccccccttcc
aagtacatctccacccccctccaggatgagacggccgccccgggccccgccctgctcaga
cacaaggccttgtttgaaccatccaacaccccgttcagaactagccaccattctgcgctg
ccagtgaagcgtctttggcagtttctggtcaagcaggaggaagtgcaggagactttcatt
cggaacatttttaccaagaaacggggcctgaatgagtcgggtgaggaccagactgacaat
atgaaattgtcagggatggaggagacgggaaacaatcagactgaatctaatctgggctcc
cctggaggaaaggcacgcatcatccacaaggaatctgacatcatcacggcctttgccatc
aacaaggcaaaccgtaattgtttagtcatggcctccacccatgacattcaggagttggat
gtgtcatccatcttggccacacagattttgacatggatcgatgacgatgatgcagaagtc
aaaggtgttactagtgatgacttcctggtggtccatgcacgtgatgactttgccgccctg
cacggcaccacgccgtacacccacagcagccccggtacacccatcaatatgccgtggctg
ggaggagtgcagacgggccggggtgcagctgtgatgatcaagagaaacatcaacaatgtt
cgaagaatgacctcccaccccacactgccttactacctgacgggagcgcaggacggcagc
gtgaggatgttcgagtggggccactcccagcagatcatctgcttcagaagtccaggcaac
tcccgagtcacccggatacgattcaaccaccagggaaacaagtttggcatcgtcgacgcc
gatggaggtttgagtctgtggcagaccaacaccagtgggaacgcacctaaaccatacctg
acgctgcagtgccacaacaagacggctcacgactttgtcttcgtgggctcctcctccctc
attgcctctgcgggtctttccacagacaacaggaacgtgtgtctgtgggacactctggtg
acgcctgcaaactgccttgttcatgctttctgctgccacgagtccggagccacggtgctc
tccatggcgtccaggcagcagctgctgatcaccggggggaggaagggctggatcagcgtg
ctggagctggcccacaagcaccagcgccagagcttccaggcccacgactcgcccgtcaaa
gcgctggccgtcgacccgaccgaggactgcttcatcagcgggtcggccgagggcaacatc
aagatctggagtctggccacgcagtgcgccctctacaccttccccaacgagcacgcccgc
cagtcgctgttcaggaacctcggcacgggcgtcatgcagatcgaggtgggcccgaccaat
cacatcttctcctgcggcgccgacggcaccatgaagatgagggttctccccaaccgcttc
agcatcatcaacaacaacaacaacgacctcaagaacgacgtcaagttcatcatctag
DBGET
integrated database retrieval system
