KEGG   Gasterosteus aculeatus (three-spined stickleback): 120830813
Entry
120830813         CDS       T07457                                 
Symbol
atxn2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gat03019]
    120830813 (atxn2)
Messenger RNA biogenesis [BR:gat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120830813 (atxn2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 120830813
NCBI-ProteinID: XP_040051666
LinkDB
Position
XIII:complement(4949572..4966385)
AA seq 1143 aa
MSMKAGGNRSKPGGGNTSGAAAAASGAGGSGGGRQNLGRGRHSGKGPAAVIFNGVYANMR
MVHVLTSVVGTKCELKVKNGAVYEGVFKTYGPECDLVLDAAHRKSPEPSIAPRKEDIVES
IVFKASDVVVVTFKDVDLNFARKVSSDADNFTDSAVSGKINGEHKEKDLEPWDGGETHNS
DSLESLDTDVSNGWDPNDMFKYNEEKYGVLSTYDSSLSTYTVPLERDNSEEFLKREARAA
QLAEEIEASATYKARVALENDERSEEEKYTAVVRGEREAHTLSRENKYIPPGQRNREAMS
WGPGRQNSPRLAQSSAGLPTPRPGPHDYSPSSGPDQRVVNGGSSHWPSPCPSPSSRPPSR
YQSGPSSLPPRATTPTRPPSRPPSRPSRPPSHSSHPSYPSSSSSFSHHGPTSPASTLPKR
MSSEGPPRMSPKSQRTPRAHRVPPCRTAGVPPGGDMISHNAPGEVPVTQPTRSSSSGGTW
SSVVSGAHRPRSPRQNSVGGASSLPAAQTGTAPVETVAAATSASSPTAASPAPPVVASAS
GDAKECRVQETRQASPTANKENIKPLESSAGIPRTVCKGLPSMAPDHRKQIDNLKKFSVD
FRLQSSSNPEAAFDQKMTKPPRDAGDKPKELPLDKASAVGREGSEDGAAGPSVGAPAPST
ANSSKPGSPAALSPSPSAPDQRRAGLDVTSQGVQTTAASSFSGPKHEEKEEKKEPVHDQV
RKSTLNPNANEFKPRFNAQPKPANTPTPPRPQGQPSPSIVVQQPQTMYGQTVCFPQMYPL
TPVSPGVQKSIIWKSPAMYQVQMPHMTVSQSKPYRPGKVPNMPQQRPDQHHPPGAPTMMH
PATAAGPPIVAQNPAYSAQYFTCSPQQFTSQPLVQQMAHYQSQAQHVFSPVMQGSAGMMA
PPTHGQPTLVSSSAAQYPEQTHTMYVSQGPMPQQYAHPSATLHPHQQHPQPSATPTGQGQ
QGGPQQHGGPPNHPAASPVQHQQHQQHQQHQQHQQHQQHQQAAAAAAAAQALHLANQPQQ
QQMYSALAPTPPSMTPGPNPQSPQASFPSAQPTVYIHPQQVQHGYNHNHMAHVQQAHMQP
GMVQSHHPGQTHPTMMLMATQGPPGGPQQQMPQNALNPIPVSSTTHFSYLAHPQVQAHHQ
QQL
NT seq 3432 nt   +upstreamnt  +downstreamnt
atgtcaatgaaggccggtggaaatcgcagcaagcccggcggaggcaacacctctggtgcc
gccgcagccgcctccggtgccggaggaagcggagggggacgacagaatctgggcagggga
agacacagtggtaaaggtcccgcagcagtcattttcaatggtgtatatgcaaatatgagg
atggtccatgtcttgacttcagtggtggggaccaagtgtgagctgaaagtgaaaaatgga
gcagtctatgaaggagtatttaagacatacggcccagagtgtgacctggtgttggatgca
gcccacagaaagagtccggagccaagcatagctcccaggaaagaagatattgtggaaagc
atcgttttcaaggcctccgatgtcgtagttgtgaccttcaaagatgtggacctgaatttc
gccaggaaagtctcctctgatgcagacaacttcacagattcagcagtgagcggtaagatc
aatggcgagcataaagagaaggatctagagccatgggatggaggagagacacacaactct
gacagcctcgagtctctggatacagatgtgtcaaatggctgggaccccaatgacatgttc
aagtacaacgaggagaagtatggagtattgtctacatatgacagcagcttgtccacatat
acggtccctctggagcgagacaactctgaagagttccttaagagagaagcgcgtgctgcc
cagctggcggaggagattgaggccagtgccacatataaggcccgcgtggccctggagaac
gatgagcgctctgaggaggagaaatatactgctgtcgtgcgtggggaaagggaggctcac
acacttagcagagagaacaagtacattcctccaggtcagaggaacagggaggcgatgtct
tggggacccgggcgtcagaattctccccgtctagctcagagctcagcgggactcccgact
cctcgaccaggaccccacgactacagtcccagctccgggcccgaccagagggtggtcaac
ggaggttcatcccattggccctcaccctgtccgtctccttcctcccgccccccttctcgt
taccagtctggcccctcctccctgcctcctcgggcgaccacgcccaccaggccaccctcc
agacccccctctcgaccttccaggcctccctctcattcatcccacccctcctatccctcc
tcctcatcctccttttcccaccatgggcccacatcgccagcctccactctgcccaaacgc
atgtcttcagaaggcccacccaggatgtctccaaagtcccagcggacgcctcgtgctcac
agagtgccaccctgtcggactgctggagtcccaccaggaggggatatgatttcccacaat
gcccctggagaggtcccagtgactcaaccgaccaggagcagttcctctggggggacgtgg
tcctctgttgttagtggagctcacagacctcgctcccccagacagaacagtgttggtgga
gcctcttccctcccagcagcccagacaggaacggctcctgtggaaacggttgctgcggcg
acatcagcttcctctcctactgctgctagccccgccccccctgtggttgcctcggcctca
ggagatgcaaaagagtgccgtgtccaggagaccagacaggcctcccccactgcaaacaag
gaaaacatcaagcccttggaaagctcagctggtatccccagaacagtgtgtaaaggactt
ccctctatggcaccagaccacagaaaacaaatcgataatttaaagaaatttagtgttgat
tttcggttgcagtctagttcaaacccagaagctgcctttgaccagaagatgaccaagcct
cccagagacgcgggagacaagccgaaagagcttcccctcgacaaagcctcagcagtgggg
cgggagggcagcgaagacggtgctgctggcccctccgttggtgcccccgctccgtccacc
gcaaactccagtaagcccggcagccccgctgcactctccccgtctccatcggcccccgac
caaaggagggcgggactggatgtgacatcacagggagtgcagacgaccgcggcgtcctca
ttcagtggacccaagcatgaagagaaggaggagaaaaaggagccagtacacgatcaagtg
agaaaatccaccttgaacccaaatgccaatgagttcaaaccccggttcaatgcgcagccc
aaaccagcaaacactccgacgcccccccggcctcagggccagcccagcccctccatcgtg
gtccagcagcctcagactatgtacgggcagacggtctgcttcccccagatgtatcccctc
acaccggtcagccctggagtgcagaaaagcataatatggaagtctccagctatgtaccag
gttcagatgcctcatatgacagtcagccagtctaaaccctacagaccaggtaaagttccc
aacatgccccagcagaggccagatcagcaccacccgcccggcgcgcccactatgatgcat
ccagccacggccgcaggaccccctattgtagcacagaaccccgcctactctgcccaatac
ttcacctgcagcccgcagcagttcaccagccagccgctggtgcagcaaatggcgcattac
cagtcacaggcgcagcatgtgttcagtccggtaatgcagggcagtgccgggatgatggcg
cctcccacacacggccaacccacgctcgtctcttcgtcagcggcacagtaccccgagcag
acacacaccatgtatgtgtctcaagggccgatgcctcagcagtacgcccaccccagcgcc
accttgcaccctcaccaacagcaccctcagccctctgccacacccaccggccaaggccag
cagggtggtccacaacaacatggaggacctcctaaccacccagctgccagcccagtacag
caccaacagcatcagcagcaccaacagcatcagcagcaccaacagcatcagcagcaccag
caggccgctgcagcggcagcagcagcgcaggccctccacctggccaaccagccccaacag
cagcagatgtattctgccttggcccccactcctccctccatgaccccggggcccaatccg
cagtctccccaggcatccttcccctccgcccagccgacagtctatatccacccacagcag
gtgcagcacggctacaaccacaaccacatggcacacgtacagcaggcccatatgcagcct
ggtatggtgcagtcccaccacccggggcagacccaccccactatgatgttgatggctacg
caaggtcctccaggtggtccgcagcaacaaatgccccagaatgccctcaaccccatacct
gtttcctccaccacgcatttctcctacctggcacatccacaagtgcaagcccatcatcag
cagcagctgtag

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