Gasterosteus aculeatus (three-spined stickleback): 120830837
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Entry
120830837 CDS
T07457
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120830837 (hnf1a)
Transcription factors [BR:
gat03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120830837 (hnf1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
HNF-1B_C
Homeodomain
Telethonin
HTH_37
HTH_5
Motif
Other DBs
NCBI-GeneID:
120830837
NCBI-ProteinID:
XP_040051706
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All DBs
Position
XIII:14723903..14731529
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AA seq
675 aa
AA seq
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MEERLEERAAAATANPGRLTALQEQLIWALLGSGLSRDILVQAIGELERDRASAGAERGE
RGDGESSEEGEMDFPPPIFRELEKLLPEEAAKLRAEVDRLLQEDPWHVAKIVKSYMQQHN
LPQREVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKQCEISQREYTSSGGAAFK
HTSNIKSLNRCEKCCKKAINKRSFSFSEFTNAKHGLGSAEEQGEDTRKGRRNRFKWGPAS
LQILFHAYDRQKNPSKEEREGLVEDCNRAECHQRGVSPSQLAGLGSNLVTEVRVYNWFAN
RRKEEAFRHKLALDTPFTSQSTSSSHHNLPPSPEQGVKYSQQILCDTLSSARGSLGDRVG
HLMVSPIQLEPSHTLLETHNPKLVSSGGPLPPVSTLTSLHSLSASPASSQGLIMASLPSV
MSIGESSLLIGNIALASSPSHLCQEINLKRTNVAFDRFSLHAASGRACYQQRRGKFHHSP
ANLFPAAASRLSPAAAVTPPAEPHGGQSLYGDHGAAAVSHVQQVGFASVPHVQSAVSGHG
HHGQQQPGDADQPHCRKTDSHSRSRGTEGITFRRRLPPPAAAHTCASFLRQAGAVSCLSV
DGESSVSPAVTFTSRHQRLHPHTNGLYCSVEVLWQLSVSSRSVGWTLCFGCTATCGVNDQ
KSLDSGPRGRVSKAL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaggttagaggaaagggccgcagcggccacggcgaatcccggccgcttgacc
gcacttcaggagcagctgatctgggccctgctgggatctggactgtcccgggacatcctg
gttcaagccataggagagctggagcgagacagggcgagtgctggcgccgagagaggagag
aggggggatggagagagctccgaggaaggagaaatggatttcccgccgccaatattccga
gagttggaaaagcttctcccagaggaggcggccaaactgagggctgaagtggaccggcta
ttgcaggaggacccgtggcacgttgctaaaattgtgaaaagctacatgcagcagcacaac
ctccctcagagagaggtggtggagtccacaggactcaaccagtcccatctctcccagcac
ctcaacaaaggcacgcccatgaagaaccagaagagagcctctctgtacacctggtacgtc
aagaagcaatgcgagatcagccagcgtgagtacacaagcagcggtggagctgctttcaaa
catacatcaaatatcaaatctctaaatcgctgtgaaaaatgttgtaaaaaagctataaat
aaaagaagcttttccttttcagaatttaccaacgcaaaacatggccttggatctgcagag
gagcaaggagaagacaccaggaagggacggaggaaccgcttcaaatggggtccggcatcc
ctgcagatcctcttccacgcctacgatcggcagaagaaccccagcaaagaggagagagaa
ggtttagttgaggattgtaacagggcggagtgtcatcagaggggggtgtctccgtctcag
cttgccggcctcggctccaacctggttaccgaggtccgggtgtacaactggttcgccaac
cgccggaaagaggaggcgttccgtcacaaactggctctcgacacgccttttaccagccag
tccacctcctcttctcaccacaacctccccccgagtccggagcaaggtgtcaaatacagc
cagcagatcctgtgtgacaccttgagctcagcgagaggaagcttgggggacagagtcggt
catctgatggtcagcccgatccagctggagcccagccacacactcctcgagacgcacaac
cccaagctggtgtccagcggtggcccactgcccccggtaagcactctgacctcgctgcac
agcctgtcggcctcccctgcctcctcgcagggcctcatcatggcctcgctgcccagcgtc
atgagcatcggggagtcgtcacttctcattggtaacatcgccctcgctagttcaccctct
catctctgtcaagaaataaacctgaaaagaacaaatgtggcctttgacaggtttagcctc
cacgcagcctcaggccgtgcctgttatcaacaacgtcgggggaagtttcaccactctcca
gccaatctctttccagcagcagcttcacggctctccccagcagccgctgtcacaccacct
gcagagccacatgggggccagtccctttatggcgaccatggcgcagctgccgtgtcacat
gtacaacaagtcggattcgcctcagtaccacacgtccagtctgctgtctcaggccatggt
catcacggacagcagcagcctggggacgctgaccagcctcactgccgtaagacagattct
cacagcagatcccgaggaacagaggggatcacctttagaagaagactccctccacctgca
gccgcacacacctgtgccagcttcctccgacaggctggagctgtatcctgcctctcagtc
gacggagagtcatcagtctcacctgctgtcaccttcaccagcagacatcagcgcctacat
ccccacacaaatggtctctactgctcagtagaagtgctctggcaactgagcgtctcctcc
cggtcagtcgggtggacattgtgttttggatgcacagctacctgtggtgtaaatgaccag
aagagcctggactcagggccccggggtcgtgtttcaaaggctctctga
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