Gasterosteus aculeatus (three-spined stickleback): 120830950
Help
Entry
120830950 CDS
T07457
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120830950 (tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120830950 (tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120830950 (tars1)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
120830950 (tars1)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
120830950 (tars1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120830950 (tars1)
Prokaryotic type
120830950 (tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
120830950
NCBI-ProteinID:
XP_040051921
LinkDB
All DBs
Position
XIII:2462128..2476083
Genome browser
AA seq
724 aa
AA seq
DB search
MADQAVVEKMSELKVGEKKKGGPECAKDGGKKKAKGAAGESAGRAELTPAPQYIDERLSL
YTKLKAEHEALMAERAAQHSRAIKVTLPDGKVVDAESWKTTPYQVACGISQGLADNTVIA
KVNGAVWDLDRPLEDDCSLQLLKFDDEEAQAVYWHSSAHILGEAMERVYGGCLCYGPPIE
SGFYYDMFLENSEGVSSNDFPGLETLCKKIIKEKQPFERLEIKKETLLEMFKYNKFKCRI
LNEKVTTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYG
ISFPDPKMLKDWEKFQEEAKNRDHRKLGREQDLFFFHDLSPGSCFFLPKGAFIYNTLIEF
IRSEYRKRGFQEVVTPNIYNSKLWQTSGHWQHYSDNMFSFEAEKETFALKPMNCPGHCLM
FDHRPRSWRELPIRMADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMDQIEEEIKGC
LDFLRTVYEVFGFTFKLNLSTRPEKFLGDPSVWEQAEKQLENSLNDFGEKWVLNPGDGAF
YGPKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLSFVSQDGEDKKRPVIIHRAILGSVER
MIAILTENYGGKWPLWLSPRQVMVVPVGPTCEEYAQKVKQEFHNKGFMSDVDLDPGCTLN
KKIRNAQLAQYNFILVVGEKEKTSNTVNVRTRDNKVHGERTVEECVERLQHHKTCRSLNA
EEDF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccaagctgtcgtggagaaaatgagcgaactgaaggtgggcgagaaaaagaag
gggggacctgagtgtgccaaagatggaggaaagaagaaggctaaaggtgccgctggggag
tctgcaggccgggctgagctgacgccagccccccagtacatcgacgagcgtctctctctg
tacactaagctgaaagcggagcacgaagcgctgatggcagagagggctgcgcagcacagc
cgagccatcaaggtgactctgcccgacggaaaggtggtggatgccgagtcctggaagacc
acgccgtaccaggtggcttgtggaatcagtcaaggcctcgctgacaacacggtgattgct
aaggtgaacggcgccgtgtgggacctggaccgaccgctggaggacgactgcagccttcag
ttgctcaagttcgatgatgaggaggctcaagctgtttactggcactccagcgcccacatc
ttgggtgaagccatggagagggtgtacggaggctgcctctgctacgggcccccgatcgag
agcggcttctactacgacatgttcctggagaacagcgagggcgtatcgagcaatgacttc
cccggtctggagaccctctgcaagaagatcatcaaggagaagcagccgtttgagaggttg
gagataaagaaggaaactctgctggaaatgttcaagtacaacaagttcaagtgccgcatt
ctcaatgagaaggtcaccacccccaccaccaccgtctacaggtgcggccctttgatcgac
ttgtgtcgcgggccccatgtgagacatacaggaaagatcaaggcgctaaagatccataag
aattcgtctacctactgggaggggaaggcggacatggaaaccctccagaggatctacgga
atctccttccccgaccccaagatgctcaaagactgggagaagtttcaggaggaggccaag
aaccgagatcaccgcaaactgggccgggagcaggacctgttcttcttccacgacctgagt
cccgggagctgcttcttcctgcctaagggggccttcatctacaacaccctgatcgagttc
atcagaagtgagtacaggaagaggggtttccaggaggtggtgacgcccaacatctacaac
agcaagctgtggcagacctccggccactggcagcactacagcgacaacatgttctccttc
gaggccgagaaggagaccttcgccctcaagcccatgaactgcccgggacactgcctgatg
ttcgatcaccggccgcgctcctggagagagttgcccattcgcatggccgacttcggcgtg
ctgcacaggaacgagctgtcaggggccctgacgggcctcacccgggtccgccgcttccag
caggacgacgctcacatcttctgcaccatggaccagatcgaggaggagatcaagggctgc
ctggacttcctgcgcaccgtgtacgaggtcttcggattcacgttcaaactcaacctctcc
acccggccagagaagttcctgggggacccgtccgtctgggagcaagcagagaagcaactg
gagaacagcttgaatgacttcggggagaaatgggtgctgaaccccggcgacggcgcgttc
tacgggccgaagatcgacatccagatcaaggacgccatcggccgctaccaccagtgtgcc
accatccagctggacttccagctcccgatccgcttcaacctctccttcgtcagccaagac
ggcgaggacaagaagcggccggtgatcatccacagagccatcctgggatcggtcgagagg
atgatcgccattctgacggagaactacggaggcaaatggccgctgtggctctctcctcgt
caggtgatggttgttcccgtggggccgacctgtgaagaatacgcccagaaggtcaaacag
gaattccacaacaagggcttcatgagcgatgtggatctggaccccggctgcactctgaac
aagaagatcagaaatgcacagttggcgcagtacaacttcatcctggtggttggagagaag
gagaagaccagcaacactgtgaacgtacgcacccgcgacaacaaagtccacggcgagcgc
accgtggaggagtgcgtcgagcgtctccagcaccacaagacctgcaggagcctcaatgct
gaggaggacttctga
DBGET
integrated database retrieval system
