Gasterosteus aculeatus (three-spined stickleback): 120831048
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Entry
120831048 CDS
T07457
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120831048 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120831048 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120831048 (pdlim5a)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
120831048
NCBI-ProteinID:
XP_040052098
UniProt:
A0AAQ4RPB4
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Position
XIII:7503602..7545121
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AA seq
571 aa
AA seq
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MSSNYSVMLLGPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGMGIGDVVLSIDGIATE
GMNHLEAQNKIKSCTGNLSLNLKKASSAPKPPPVAPKDDRSDIIKPVALTHPPSPAYPHP
HASCPSNAGHNKAPRPYGGRASDSEHPPFIPSPSSAFTPASCNSSPLPPPPPPVCYPSSS
SSSSSSSSSPPVLVAPQPSVYNTPISLYSTENACEVAMGQMRGLLESQGGAVPLQFNGVP
RKHIVDTDINFYHVPTHADASRKRITEDTEDWRPRGGTTQSRSFRILAQITGTERAQDEE
ADAAKKTNKEPEEPELNSHQSAVVKTMIKGPVAIQGHGPRTGLITPSFGMKGNGSAVVPR
CPAPSRPVPQPHPKDEDTLVQMAEHIPAGTRTPMCGHCNMVIRGPFLVAMGKSWHKEEFN
CAHCRVSLADTGFVEEQGSVYCEHCYEDFLAPTCSRCQSKVLGEVINALKQTWHVYCFLC
ACCQQPIRNNTFHLEDGEPYCEQDFYSLFGTSCRGCEFPIEAGDKFLEALGYTWHDTCFV
CTLCCTTLEGQTFFSKKDKPLCKKHAHSLKI
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagcgtcatgctccttggcccggccccttggggcttcaggctgcag
ggaggcaaggacttcaacatgcccctcaccatctccaggctgacagatggtggaaaggcg
gccaaagggggcatgggtatcggggacgtggttctgtctattgacggcatcgccacagag
ggcatgaaccacctggaggcccagaacaagatcaagagctgcactggaaacctcagcctc
aacctaaagaaggcctccagcgctcctaaacctcctcccgtggcaccgaaggacgaccga
tcagacatcataaaaccagtggcgctcacccatcccccttcgccggcctacccccaccct
cacgcctcttgcccttccaacgccggccacaacaaagcccccagaccgtacgggggccgc
gcgtcagacagcgaacaccctcccttcatcccgtccccgtcctctgccttcacccccgct
tcttgcaacagcagtcctcttcctcctcccccgcctcctgtctgttacccatcatcttcc
tcctcctcctcctcctcctcctcctccccccctgtcctcgttgcgccccagccgtcagtg
tataacacgcccatcagcctgtactccactgagaacgcatgtgaggtggccatggggcag
atgaggggcctgctggagagtcagggcggagccgtgcctctgcagtttaatggagttccc
aggaaacacattgtggacacagacatcaatttttaccatgtgcccactcatgctgatgcc
agcaggaagcgcataacggaggacacagaggactggcgtccacgcggcgggacaacccag
tccagatctttccggattctggctcagatcaccggtaccgagcgcgctcaagatgaggaa
gctgatgcagccaagaagacaaataaggaaccagaggaaccagaactcaacagccaccag
tctgcagttgtcaagaccatgatcaaaggaccagttgcaatccagggtcacggtccgcgg
actggtttgattaccccatcttttggtatgaagggtaatggaagtgccgttgtcccgaga
tgtcccgccccatccagaccagtacctcagccccacccaaaagacgaggacaccctggtc
cagatggctgaacacatccctgctgggactcggacccctatgtgtggccactgcaacatg
gtgatcagaggaccctttttagtagcaatggggaaatcgtggcacaaggaggaatttaac
tgtgcccactgccgtgtatccctggcagatacaggctttgtggaagaacaaggatctgtc
tactgtgaacactgctatgaagatttcttggccccgacatgcagccgctgccagtccaaa
gtactgggggaggtgataaatgccctcaaacagacgtggcacgtctactgctttctgtgc
gcttgctgtcagcagccaatcagaaacaacaccttccacctggaggacggagaaccatat
tgtgaacaagacttctacagtctgtttgggaccagctgccgtggctgtgagttccccatc
gaggctggagacaagttcctggaggccctcggttacacctggcacgacacctgcttcgtc
tgcaccttgtgctgcaccacgctcgagggacagaccttcttctccaagaaagataaacct
ctttgcaagaaacatgctcactcactgaagatatga
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