Gasterosteus aculeatus (three-spined stickleback): 120831109
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Entry
120831109 CDS
T07457
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120831109
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120831109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
120831109
NCBI-ProteinID:
XP_040052200
LinkDB
All DBs
Position
XIII:complement(17440904..17452314)
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AA seq
1472 aa
AA seq
DB search
MMTPENESGSPTQTFPPIRFKALDYVFETSTSLKVMMNLLALPAPYLTGTSDRYPHRGHL
PEGPYRTPWIRGKVISTCKLFVSGSVLDDLGEKSQADVSPERFLSEANEDVEAIASSDAD
SRKDPDQHECVCFLKETRIDNPCQESFLKLTTDQMTPGDAHKDLLLREELLVADYLPHFR
RHLPTLRAKLSRLRSLPVADPLLSSTGDTISEDAIFRRCASFERPADELTMDLRTCPNVL
EEFGKEPLMKGESLLLPVLVDTLSLSHENCTAFSSICGPIIAAPEQLEEQLPVLDLLHKA
FLSDGSTSVDVSPYEAAEEPDEKGHTKGDLMEPAGRVMLPTEMELDVTLTPSLKTSPTRM
RPSLGDLQREAVSVTGAGSLVSARAQGEMETALWKAEKHPTFMVGFLFAEPETNEPAVDL
QPLSEAWKAMKSEDRSSGLREMEDGAPSVHLCSVGDFTESMSPDRPPTTEEEMEDFTKLH
PEHEDGASAPMSPDSRECDGGAFHVETTAGDIRPQNQPAADGARAASPVHAVITSNKEVK
PSTFPQVDAATSSRDEGPSGRSLEGAGVFSARKSDRSAGRHDYDAASSGERQRWLPGTKR
PLEETLDPLASFMMLRSQQVARLTEAPETSTSAPNVEQQKTPSEHHQPPTAQIQRSDQRP
TYMSSAVSANATREQNAADQTGQISRSIHQNGQDSRVVEVRATVSQQRAHGELLAFAQPR
LSSAGQLGLNFAARGDFSCLTPDQTHFLLKQQERALRGTRAQSTELLGELFKQAALIHVL
VTFKEMLLKCDLGAALEYLTKAAEARAEQSLEQLLKRLRIILYLSQQNQESNLKLLELQK
LLAEWLHRRTGQNAVEKMLVIISVDSDHIRSLIISSLSHVAGAAVTAVRPEENKRKLNGA
SVVSSACDSVCVVVYEQHVGPDFPWSSFSVVVEYDHPGQSPWAAVCRERSIGHLVFHTVI
AEPDKPKAWRLLEDDVPYVLLVTEGLLDCPLLLQTLESGFDMTVLERSHSPSLQMLGGTH
HYAVITVDESTAIIIQEEEELCQERASERVVMRLTALSLQYNYCWLILHCRENHGGGFST
EAFSNLVLVYSSLVLFSMKTEDLDVKVLIVSEVTEMAKWISQICFHSLMAGEKDPRTYLD
RDWLTVIPSEEERRLVQFPCINPLVGQLMLRRAPSVQWLLGASLSQLMELLPEVPHKVLK
LFSDTTSLYTGTANQPESLTGFTETNQQTHGPLCSPWTPTAGPEFVNSDPRQEAPVSPHP
ELFSSDHDTGVLFRGDHSFRDPDPAMRAGDPAFRLDLSSSFGVPVVPVQSSWTASDPWRE
QAPFSGWRGKAGAAGRVVARAGGEWTQRAPSDVCGPFEQNPTYDRGGRSYASSQVFGDLR
RPDGHPVSCGLSPPTRVALWGLGPNCGERLASSGEAAASANYGSKCWMGRERKRSGEAAG
LDGTALTPLKKRRIRYEIVPGRCDGQTRLKLF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgccggaaaacgaaagcggttctccgactcaaactttccctccaatcagattt
aaagctctcgactatgttttcgagaccagcaccagtctgaaagtgatgatgaacttactg
gcgctgccggccccgtacctcactgggaccagtgaccggtacccgcacaggggccactta
cccgaaggcccctacaggaccccgtggatcagaggaaaggtgatctcgacctgcaaactg
tttgtcagtggctctgtgctcgatgacctgggagagaaaagccaagcagacgtttcacca
gaaaggtttctgagtgaggcaaacgaggacgtggaggcgatagcgagctctgatgccgac
tcacggaaggatccagaccagcatgagtgcgtctgcttcttaaaagagacacgcatcgac
aatccgtgtcaggaatcatttttgaagttgacaactgaccagatgacacctggagatgca
cacaaagatctcctcctgcgagaagagctcctggttgccgattacctgccccacttcagg
agacatttacccacgctgagagctaaactgtcccggctgaggtcgcttcctgtggccgac
cccctgctgagctcaacgggagacaccatctctgaggacgccatattcaggcgctgtgca
tcttttgaaagacctgctgatgagctcaccatggaccttcggacgtgtccaaacgttctc
gaggagtttggtaaagagccattgatgaaaggagagtctcttttactgcctgttctagtg
gacacgctgagtctgagccatgaaaactgcaccgccttttccagcatttgtggtccaatt
attgctgctcccgagcagctggaagagcaacttccagtcctggatctgcttcataaagct
ttcctctccgatggatccacgtcagttgacgtttccccctatgaagcagcggaggagccc
gacgagaaaggccacacgaagggagacttgatggagccggcgggacgtgtgatgcttcca
actgaaatggagctggacgtgaccttgacgccgagtctcaagacaagtccgacccgaatg
cgcccgtccttgggcgaccttcagagggaggcggtgtcagtgaccggcgccgggtctttg
gtgtcagccagagctcagggagagatggagacggccctctggaaggcggagaagcacccg
accttcatggtgggcttcctgttcgcagagcccgaaacaaacgaaccagcggtcgacctg
cagccgctgtctgaagcctggaaagccatgaagtcagaggatcgaagctccggactgcgg
gagatggaggatggagccccgtcggtgcatttgtgcagcgtcggagacttcacagagagc
atgagccccgaccgcccccccaccacagaggaagagatggaggactttacgaagctgcac
cccgagcacgaggacggcgcatcggccccgatgtcgcctgactcgagggaatgtgacggc
ggtgcttttcatgttgaaactactgccggcgacatccggccccaaaaccaacccgctgcc
gatggggctcgcgccgcctccccggtgcacgcggtcatcacaagcaacaaggaagtgaaa
ccttcaacgtttcctcaagtcgatgccgccaccagctccagagatgagggtcccagcggg
aggtctttagaaggtgcgggcgtgttttctgcccgtaagagcgacagaagcgcgggccga
cacgactatgacgcggcgtccagcggagaacgtcagagatggctgccgggtacgaaacgt
ccactggaggagaccctggaccctctggcctccttcatgatgctgagatctcagcaggtg
gctcggctgactgaagcacctgagacctcgacttccgcaccaaacgtcgagcagcaaaaa
acaccatcggagcatcatcagcctcccacggcgcagattcaaagatcagatcagaggccg
acgtatatgagcagcgccgtgtcagctaatgctaccagagagcagaatgcggctgatcag
acgggacaaatcagtcggtccatccatcagaacggacaggacagcagagtggtagaagtc
cgagctacggtcagccagcagcgcgcccacggcgagctgctggccttcgctcagcctcgc
ttgagctctgccgggcagctggggctcaacttcgccgcgcgaggagacttcagctgcctg
accccggaccaaacgcacttcctcctcaagcagcaggagcgggcgctccgcgggacgcgc
gcgcaaagcacagagctgctcggagagctgttcaaacaggcggctctgattcacgtgctg
gtgacgtttaaggagatgctgctgaagtgtgacctcggcgctgcactggagtacctgacc
aaggccgctgaggcgcgtgcggagcagagtctggagcagctgctgaagaggctgcggatc
atcctctacctcagtcagcagaaccaggagtccaacctcaaactgctggagctgcagaag
ctgctggccgaatggctgcaccgcaggacagggcagaacgccgtggagaaaatgctggtc
ataatatccgtcgactctgaccacatcagatctttaatcatcagcagcctgagccacgtg
gccggtgctgctgtaacagccgttcgtcctgaggagaacaagagaaaactgaatggcgcc
agtgtggttagcagcgcgtgcgacagtgtgtgcgtggtggtgtacgagcagcacgtcggg
cccgacttcccctggagcagcttctccgtggtggtggagtacgaccacccgggtcagtcg
ccgtgggccgcggtctgcagagagaggagcatcggtcacctcgtcttccacaccgtcatc
gccgagcctgataagccgaaagcctggaggctcctggaggacgacgtgccatatgtgctg
ttggtcacagaggggcttctcgactgccccctgctgctgcagactctggaatccgggttt
gatatgacggtgctggagaggagccacagcccgtccctgcagatgctcggagggactcat
cactacgctgtgatcaccgtggatgaaagcaccgccatcatcatccaggaggaggaggaa
ttgtgccaggagcgagccagtgagagagtagtgatgaggctgaccgctctctctctgcaa
tacaactactgttggctcatcctgcactgcagagagaaccacggaggagggttttccacc
gaagccttcagcaacttggtgttagtttattcgtctctggtgctgttcagcatgaagact
gaggatctagacgtcaaggtgctgattgtatctgaggtgactgaaatggccaaatggatc
agccagatctgcttccacagcctgatggccggggagaaggaccctcgcacctacctggac
agagactggctgactgtgattccttcagaggaggaaaggcgcctggttcagttcccgtgt
atcaaccctctggtcggtcagctgatgctgaggagagcgccgtcggtccagtggctcctg
ggggcctctctgtcccagctgatggagctgctccccgaggtgccgcataaagtcctcaag
ctgtttagtgacaccacctcgctgtacaccgggaccgcgaaccagcccgagtctctgaca
ggcttcaccgagacaaaccaacagacccacggccccctctgcagcccctggacccccacc
gctggcccagagtttgtgaactctgacccccggcaagaggcccccgtcagcccccatcca
gaactattcagtagtgaccacgacaccggcgtcctgttcagaggcgatcacagcttcagg
gacccggacccggcgatgcgggcgggcgacccggccttcagactcgacctgagttcctcc
ttcggcgtcccggttgttcccgtccagagcagctggaccgccagcgacccgtggagagag
caggcgccgttttccggctggcgcggcaaagcgggagcggcggggagagtcgtggcgaga
gccggcggcgagtggacccagagagctccgtcagatgtctgcgggcctttcgagcagaac
cccacgtacgatcgcggcggtcggagctacgcttcctcccaggtcttcggtgacctccgg
cgtccggacggccaccccgtttcctgcggtctgagccctccgacccgggtcgcgctgtgg
gggctgggcccaaactgcggcgagcgcctggcgagtagcggggaggcggcggcttcggct
aactacggctccaaatgctggatgggacgagagaggaagaggagcggcgaggcggccggt
ttggatggaacagcgttgacaccgctgaagaagcggaggattcgctatgagattgtgccc
ggcagatgtgatggacagacgaggctgaaattattttag
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integrated database retrieval system
