Gasterosteus aculeatus (three-spined stickleback): 120831157
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Entry
120831157 CDS
T07457
Name
(RefSeq) integrin alpha-2-like
KO
K06481
integrin alpha 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03271
Virion - Rotavirus
gat04145
Phagosome
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
120831157
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120831157
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120831157
09144 Cellular community - eukaryotes
04510 Focal adhesion
120831157
09142 Cell motility
04820 Cytoskeleton in muscle cells
120831157
04810 Regulation of actin cytoskeleton
120831157
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120831157
04515 Cell adhesion molecules [BR:
gat04515
]
120831157
04090 CD molecules [BR:
gat04090
]
120831157
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120831157
Exosomal proteins of bladder cancer cells
120831157
Cell adhesion molecules [BR:
gat04515
]
Integrins
Integrin alpha subunits
120831157
CD molecules [BR:
gat04090
]
Proteins
120831157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Acanthaporin
Motif
Other DBs
NCBI-GeneID:
120831157
NCBI-ProteinID:
XP_040052312
LinkDB
All DBs
Position
XIII:1913584..1929483
Genome browser
AA seq
1185 aa
AA seq
DB search
MELCWGRAVFTVMVITQRILPSLSFNVGTAGSKIFSGPADEEFGYTIKQASNHEGKWLLV
SAPWSGFSQNRKGDVYKCQVSGSRNSCDKLNLQDSVSMPDVKNVNDDMCLGLTLTRMPAD
NSLMMCGPLWGQRCGDQIFYPGICAKMNSLFQPQAAFSPAIQSCGGPMDIVIVLDGSNSI
YPWAPINEFLRKLIPSLDIGPRNTQVSVIQYGVNPKFELKLNQYKTKDEVMTAASKIIQV
YGTSTNTFRAIKFASLSGFSESNGGRPGAAKVMVVVTDGESHDVALRENVLADCEKQGIT
RFGIALLGYYTRNNINTDNLIEEIKSIASVPKEKYFFNVSEEAALSTIAGTLGSRIFNIE
GTGKGGNNFEMEMSQVGFSAHYSSTEGVTILGAPGAYAWSGTVVHQKGSKADVLPFSAFE
RTLQDKNHSSLLGYSVTTLSDGSTEYFVAGAPRSNHSGQVIVYTVIGKNQTAIIDSERGK
QIGSYFGSVLCPLDVDRDSVTDLLLVGAPMYMSDEKREEGRVYLFSVTKGILNEQGFLSG
PPSTEDARFGMAISAVPDLDLDGYNDVVVGAPLEDKGKGVIYIYNGENKALNKQFSQKIL
GSKLDPQLQYFGRSIDSFADLNDDTLPDISIGAYGKVVQLWSRGVASVSAKASFNPDKIN
ILNKPCDIKGRKLTCFNTNLCFRAVFRPKNPVGPIDISYTLTLDADLQASRVTSRGLFSK
NNERLLTEKAKILSTPLCLDYQVYVQEAPDFVNSISLKVEIEQQNADVNPVLDTSAPSAW
EFFVPFTTDCGSDNVCISDLVLSVKTDTKASSSVPVLVSGNNQELSFEVVVKNKKENAYN
TRVTVTYSGNLFYSSIFPPTGEVKCTSTQTQTVTCQVGYPALKTDQEMKFQMNFDYNLDQ
LDNRAEVKFEAESDGKEERPADNVVDLSIPVRYDAGVVLSRQSNINFYVADAIVPVVTTV
KSLDDIGPEFNFTVKVSTSNFPVSLLYLTIALPVTTKGGNQLLYVTSVDTQTGGAVTCDS
SGLVDPLKIGEKSHEASFSEENLRGTESLNCKSAKCKYIKCILKDTEIKSDYFVKVKTRI
WSGTFLSASYQTIELTSDVDVETSNPDLLVIGLKRLPVVVTISKPGVKGDVPVGVIAGSV
IAGLLLLALAVGLLWKFGFFKRKYQQLQTEADGDAQSRPHVDEVL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggagctctgctggggacgcgccgtcttcactgtgatggtcatcactcaaagaatcctt
ccctcgctgtccttcaacgtcggtactgcaggttccaagatcttcagcgggccggctgat
gaggagtttggctacacgatcaaacaagcgtcaaaccacgaaggcaaatggctcctggtc
agcgccccgtggagtggtttcagtcaaaacaggaagggggatgtttacaagtgtcaagtc
tcaggctccagaaacagctgtgataaactcaatctccaagattctgtgagtatgcccgat
gttaaaaacgtcaacgacgacatgtgcctgggtttgactctcacccggatgcctgctgac
aatagtttgatgatgtgtggtcctctgtggggacaacgctgtggagatcagatcttctat
ccaggaatatgcgccaaaatgaacagcctctttcaacctcaagccgccttctctccagct
atccagtcatgcggagggccgatggacatcgtgatcgttctggacggctccaacagcatt
tacccctgggctccaataaacgagttcctccggaaattgataccttccctcgacatcggg
cccagaaacacgcaggtcagcgtcatccagtacggagttaatcccaagttcgaactcaaa
ctcaatcagtataaaaccaaagatgaggtaatgacggctgcgtccaaaatcatacaagtg
tacggtacttctaccaacaccttccgtgccatcaaatttgccagtctgtcgggtttcagc
gaaagcaacggcggtcgaccaggcgccgccaaggtgatggtggtggtcaccgacggggag
tctcacgacgtggctttgagagaaaatgtcctcgccgactgcgaaaagcaaggcatcacc
cgcttcggtatcgctctcctgggttattacaccagaaacaacatcaacacagacaacctg
atcgaagaaatcaagtccatcgccagcgtacccaaagagaagtacttcttcaatgtgtcg
gaggaggcggcgctctccaccatcgccggaacattgggaagccgcatcttcaacatagaa
ggcactgggaaagggggcaacaactttgagatggagatgtcccaggtcggattcagcgct
cattactctagcacagagggtgtgacgatcctgggtgcaccgggggcctacgcctggagc
gggactgttgtccatcaaaaggggtcaaaagctgatgttctccccttctcggcctttgag
agaacacttcaagacaagaaccacagctcactcctgggttattcggtcaccacactgagt
gacgggtccacggaatactttgtggctggtgcacctcgctccaaccactcgggacaagtt
atcgtctacactgtgatcggcaagaatcaaactgctatcatcgattcagagcgagggaaa
cagattgggtcatactttggtagcgtcttgtgccccctggatgtggacagagactcggtg
acggatcttctgctggttggtgcccccatgtacatgagcgatgagaaaagagaggaaggc
agggtttacctcttctccgtcaccaagggtatactgaacgagcaaggattcctcagtggt
ccgccctcgactgaggatgcacgctttgggatggctatctctgctgttcctgacctggac
ctcgatggttacaacgacgttgtggttggagctccactggaggacaaagggaaaggtgtc
atctacatctacaatggagagaacaaagctttaaacaaacagttctcacagaaaatcctt
ggctccaaactggatcctcagttgcagtattttggaaggtccatagatagcttcgcagac
ctgaatgacgatacgctccctgacatctccattggcgcctatggcaaagtggtgcagctc
tggtcccgaggtgtggcgtccgtctcggctaaagcttctttcaaccctgataaaatcaac
attttgaacaaaccctgtgacattaagggacggaagctcacgtgtttcaacaccaacctc
tgtttccgtgctgtattcaggcctaagaaccctgttggaccaatcgatatatcctacacg
ttgactctggacgctgacctgcaggcatcacgtgttacctcaagaggactgttcagtaaa
aacaatgaacgtttactcacagaaaaagctaaaatattatctacgcccttgtgtctagac
taccaggtgtatgttcaggaagcgccagactttgtcaattccatcagtctgaaagtagag
atcgagcagcagaatgcagatgtgaaccctgtccttgatacgtctgctccaagtgcctgg
gagttctttgtgcctttcacaacagactgcggctctgacaatgtgtgtatcagtgatctg
gtgctgagtgtgaagacggacacgaaagcttctagctcagttcccgtgctggtcagcggc
aacaaccaggagctgtcctttgaagtggtcgtgaagaacaaaaaggagaatgcttacaac
actcgggtcacagtgacctactccgggaacctcttctactcctccatatttcctcctacg
ggcgaagtcaaatgcacctcaacacaaacacaaaccgtcacctgccaagtggggtaccca
gcactgaaaacagaccaggaaatgaaatttcagatgaatttcgattacaatcttgaccag
ttagacaaccgagccgaggtgaaattcgaggccgagagtgatggtaaagaggagaggcct
gcagacaacgtggtggacttatccattcctgtgcgatacgatgctggtgttgttctatca
aggcagtcaaatatcaatttctacgtggcggatgccattgttcccgtggtgacaacggtg
aagagtcttgatgacatcggccccgagtttaacttcacagtgaaggtttcaacgagtaac
ttccccgtcagcctcctgtacttgaccatcgctctgccagtgaccactaaaggtggaaat
cagctcctctatgtcaccagtgtggacacacaaacaggaggtgcggtcacctgcgactcc
agcggcctagtggatcctctgaagatcggagagaagagccacgaagcgtccttctccgag
gagaacctcagaggcacggagagtctgaactgcaagagtgccaaatgcaagtacataaaa
tgcatcctcaaggacacggagattaaaagtgactattttgtgaaagtgaaaacaaggatc
tggagtggcacgtttctttcggcctcctaccagaccatcgagctgacctccgacgtggac
gtcgagacctcaaaccccgacctgctggtcattggcctcaagcggcttccggtggtggtg
accatcagtaaacccggagtgaaaggcgacgttccggtgggagtgatagcaggcagcgtc
atcgctggactgctgctgttggctctggcagtcgggcttctgtggaagtttggctttttc
aagagaaagtaccagcagctccagacggaggcggatggagacgcgcagagccgcccgcat
gtagacgaggtgctgtga
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