Gasterosteus aculeatus (three-spined stickleback): 120831250
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Entry
120831250 CDS
T07457
Symbol
acana
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120831250 (acana)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120831250 (acana)
04091 Lectins [BR:
gat04091
]
120831250 (acana)
Proteoglycans [BR:
gat00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
120831250 (acana)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
120831250 (acana)
Lectins [BR:
gat04091
]
C-Type lectins
Lecticans
120831250 (acana)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
hEGF
I-set
EGF_3
Motif
Other DBs
NCBI-GeneID:
120831250
NCBI-ProteinID:
XP_040052502
UniProt:
A0AAQ4P6B6
LinkDB
All DBs
Position
II:21803811..21818016
Genome browser
AA seq
1600 aa
AA seq
DB search
MLRRIVLLSACLHAISAAFDYIYQDHSFMDPEEVLSVSIPLEEPPRLLLGGAVVLPCYFE
DLTVPDPGAPTAAPLAHRIKWSLVAKDKVTTVLVASEGRVRVGESYLDRVHLVGYPETST
DASIRISELRSSDAGVYRCEVQHGIEDGHDDVHVQVQGMVFHYRAIMGRYTLTFEKAEAA
CAQNSAVVASPEQLQAAYDDGFHQCDAGWLSDRTVRYPIHDPRVNCYGDKEELPGVRTYG
VRDLNETYDVYCYAEKMTGTVFYTASAEKFSYSEAAVACSNKGAQLATTGQLYLAWQGGM
DVCNAGWLGDRSVRYPINVRRPQCGGGLLGVRTVYLHTNQTGYPTQESRYDAFCYTESLD
EEGSGIVEEGSGVLSVTTVTRSPEVLFRPTTTESEAVGEVETQRPTDVDFAFTESPTGPP
NVTEFVVDVIERATARPDVGRELGRGSGMPPKGVVFHYRSGSGRYTFTFLEAQLACHSAG
ASIATPQQLQAAYEAGYHQCNAGWLLDQTVRYPIVLPQEKCAGDLGDQPGVRSYGLRPAE
ERYDVYCYVDELKGEVFHVSSAEGFTYEQAALSCQEHDAVLASTGELHAAWKILSFDKCR
AGWLADRSVRYPVNNPGAECVAGRSGVYTVYARPNQTDFPQLDARFDAFCFRADLLLANE
TGQNVTNIQEALVNLTSIADLIRTVVPSIISPVPVETSGSGSGSADFGSGSAIDGPSRGS
SDDLSGSGDMNGSGDRLSSGDLPGSGDLSGSGGVSGSGDLSGSGDTVISGDLSGSGELSG
SGGLFGSGSLSGSGDTVISGDLSGSGELSGSGDLFGSGGLSGSGELSGSGDLFGSGGLSG
SGELTGSGGLSGSGELSGSGDLFGSGGLSGSGELSGSGDSAGSASADLHSGELGISSTDS
SGSAQSGDGSGITVVFSGIDSSFSGEGLASGGLQEAGEGSTGIFIFHSSQVGSGELSGSG
DLSGSGSGSGLGSVLGSELSGSSADGSGESGQFSGFITDQDFSGSSGSSSGFSSGSASGH
SGEISGSGDAQILLLNHELIDASTRVTHKEHELGGGPLAFSGSGDISGSGILSGSGSGSG
FFSGVTLVGSGFTDLTVSSFGEQEASGFLLYTSGHGSGGHLSGFGRSSFLSGSGSAMSQS
ELSGSGMSGLEMSGSGLSESGMFGSGMSGSGTSGSGLSESGMSDSEFSSREEGSVTFITG
DILTEASGDTTLSMELGRGSLEYSGEGSSSSRSFHSGSGDTHRFTTSGSADSSGDAPHVV
LPSPSSDWAATESTTPPEETLSGGELTQTPGDIHGTPSPVLAPAGLAAPPTASTPASVQT
PGAAEGTDSVEGGLNPCNPNPCGAALCTVEEGVALCPEVDVCHPNPCANGATCVEGADSY
KCLCLPSYGGERCEIDEQRCEDGWTKFQGNCYLHFSDREVWLDAEQRCRDLGGHLVSIIT
PEEQDFVNSNAQDYQWIGLNDKTVDNDFRWTDGTPLQFENWRPNQPDNYFDSGEDCVVMI
WHESGQWNDVPCNYHLPFTCKKGPVSCGAPPEVENARMFGNRREEYPVNSIIRYQCGPGF
TQRRPPTVRCKADGRWEEPRVQCTDVKARQRRQRRSSELP
NT seq
4803 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggaggattgtgttgctgtcagcgtgtttacacgccatctcagcagcatttgat
tacatctaccaagaccactcgtttatggacccggaggaggttctgagtgtgagcattccc
ctggaggagccaccgcgcttgctgctggggggcgccgtggtgctgccgtgttactttgag
gacctcactgtgccggaccccggagctcccaccgccgctcccctcgctcaccgcatcaaa
tggagcctcgtcgccaaagacaaggtcacgaccgtcctggtggcctcggaggggcgggtg
cgcgtcggcgagagctacctggacagagttcacctggtgggctacccggaaacctccacg
gacgccagcatccggatatccgagctgcgatccagcgacgcgggggtctaccgctgcgag
gtgcagcatggcatcgaggatggccacgacgacgtgcacgtgcaggtccaaggaatggtg
ttccactaccgcgccatcatgggccgctacactttgaccttcgaaaaagcggaggcggcg
tgcgcccagaacagcgccgtggtggcttcccccgaacagcttcaagcggcctacgacgat
ggattccaccagtgtgacgccggctggctctccgaccgcaccgtcaggtacccgatccac
gatcctcgtgtgaactgctatggtgacaaagaggaactgcccggggtccggacctacgga
gtgagggacctcaatgagacttatgacgtctactgctacgctgagaagatgacaggcaca
gttttctacaccgcctctgcggagaagttcagctactcggaggcagcggtggcctgctcc
aataagggagctcagttggccactactggtcagctctacctggcctggcagggggggatg
gatgtctgcaacgccggctggctgggggacaggagcgtccgctaccccatcaacgtccgc
cggccgcagtgcggagggggtctgctgggtgtgcgaactgtttacctccacacaaaccaa
acagggtatccaacccaggagtcccgctacgatgccttctgctacacagagtccctggac
gaggagggttcgggcatcgtggaagagggaagcggtgtgctgagtgttaccacggtgacg
cggagcccagaggtgctcttcaggccgacgaccacagagagcgaggcggtcggagaggtg
gagactcagcggccgaccgatgtggacttcgccttcacagagagtcccaccgggccgccg
aacgtcaccgagtttgtcgtcgacgtgattgaacgagccaccgctcgacccgatgtaggg
agggagctcggcagaggctctgggatgcctccaaagggtgtagtctttcattatcgctca
ggttccggccgatacaccttcaccttcctcgaggcccagctggcctgccacagtgccggc
gcctccatcgccacgccacagcagctgcaggccgcatacgaggcgggatatcaccagtgc
aatgcaggatggttactggatcagactgtgaggtaccccattgttttaccacaggagaag
tgtgctggagatctgggggatcaaccaggagttcgatcgtatggtttgaggccagcagaa
gagagatatgatgtgtactgctacgttgatgagctcaaaggtgaggtttttcatgtgagc
tccgccgagggtttcacctacgaacaggccgctttgagttgccaggagcacgacgccgtg
ctggcctccactggagagctccacgcggcttggaagattttgagtttcgacaagtgccgc
gccggctggctggcggatcgcagcgtccgctatcccgtcaacaaccccggcgccgagtgc
gtagcagggaggtcaggcgtgtacaccgtgtacgctcgccccaaccagacggacttccca
caacttgatgccagatttgatgcgttctgcttcagagcggatttactacttgcaaatgaa
actgggcagaatgtcacaaatatccaggaggccctcgttaacctcacttccatcgctgat
ttaattaggactgtggttccttccatcatctctcctgttcctgtggagacgtcgggctct
ggctccggctcagcagactttggctcaggatctgcgattgatggtccctctcgaggttcc
tcagatgacctgtccggctctggagacatgaatggatctggagacaggttgagctctgga
gatctacctggatctggagacttatctggatctggaggcgtgtctggatctggagacttg
tctggatctggagacacagtcatctctggagatctatctggatctggagaattatctgga
tctggaggcttgtttggatctggaagcctgtctggatctggagacacagtcatctctgga
gatctatctggatctggagaattatctggatctggagacttgtttggatctggaggcctg
tctggatctggagaattatctggatctggagacttgtttggatctggaggcctgtctgga
tctggagaattaactggatctggaggcctgtctggatctggagaattatctggatctggt
gacttatttggatctggaggcctgtctggatctggagaattatctggatctggagactcg
gctggcagtgccagtgctgacctgcacagtggagaattaggtatcagcagcacagattct
tctggatcagctcaaagtggagatggatccggcatcactgttgtattttcgggcatcgac
agctctttctctggagagggcttggcttcaggtggactccaagaagctggagaggggagc
actggaatcttcatcttccattcatctcaggtcggctctggagagctcagtggtagcggg
gacttgtccggttctggatccggctccggtctgggctccgttctgggctccgagctaagc
ggctcatccgcagatggctctggagaaagtggacagttctctggtttcatcaccgaccag
gacttttctgggtcaagtgggtcctcatcaggattctcctctggcagcgctagcggacac
tcgggagagatttctggaagcggggacgcacagatcttactgctcaatcatgaactgatc
gatgcctccactcgtgttacccacaaggagcatgagcttggcggaggccctctggcgttt
agtggctccggagacatttcaggatctgggattctcagcggctctggaagtggctccggg
ttcttctcgggtgtgacccttgttgggtcggggttcactgaccttacagtatcatccttt
ggagagcaggaggcctccgggtttctactctacacctctggacatggaagtggtggacat
ttgtctggatttggacgctcaagtttcctctccgggtctggatcggcaatgtctcagtcg
gaattgtctggatcgggaatgtctggattggaaatgtctggatcaggactatctgaatca
ggaatgtttggatcaggaatgtctggatcaggaacatctggatcaggactatctgaatca
ggaatgtctgattctgagttctcaagtagagaagaaggaagtgttacattcattactggg
gatattctgacggaggcatctggagacaccacactgtccatggagctcggacgggggtcc
ttagagtacagcggagaaggaagcagtagcagcagaagcttccactctggcagcggagac
acacaccggttcacaaccagtggctcggcagattcctctggagatgcgccacacgtggtg
ctgccctctccatccagtgattgggcagcaacagaaagcaccacgccgccagaggagacc
cttagtgggggggaactgacgcagacccctggtgacatccatgggactccctcccctgtg
ctcgccccggcaggactggctgctcctcccactgcgagtacaccagcctcggttcagaca
ccaggcgctgctgaaggaacggattcggtggaaggtggtttgaacccgtgcaacccgaac
ccctgcggtgctgctttatgcacagtggaggaaggtgtcgctttgtgccctgaggtagac
gtgtgccatcccaacccttgtgccaatggagccacctgtgtggagggcgcagactcttac
aaatgcttatgcctgcccagctacggaggggagcgatgtgagattgatgagcagcggtgt
gaagacggctggaccaagttccaggggaactgctacctgcacttctccgaccgggaggtg
tggctggacgccgagcagcgctgccgggacctcggcggccacctggtcagcatcatcacg
ccagaggagcaagacttcgtcaactcaaacgcacaggactaccagtggatcgggttgaac
gacaagaccgtagataatgacttccgctggacggacgggactccactgcaattcgagaac
tggaggccgaaccagccggataattacttcgactctggagaggactgcgtggtgatgatc
tggcacgagagcggccagtggaacgacgtgccctgcaactaccacctgcccttcacctgc
aagaaaggcccagtgtcctgcggcgccccgccggaggtggagaacgcccgcatgtttggc
aacaggagggaggagtaccccgtcaactccatcatccggtaccagtgcggccccgggttc
acgcagcgccgcccccccacggtgcgctgcaaggccgacggccggtgggaggagccccga
gtgcagtgtactgacgtgaaagccagacagagaagacagaggaggagcagcgagcttccc
tga
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