Gasterosteus aculeatus (three-spined stickleback): 120831262
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Entry
120831262 CDS
T07457
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120831262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120831262
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120831262
REST complex
120831262
Heterochromatin formation proteins
Other heterochromatin formation proteins
120831262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
120831262
NCBI-ProteinID:
XP_040052546
UniProt:
A0AAQ4RE14
LinkDB
All DBs
Position
II:21786041..21802323
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AA seq
1298 aa
AA seq
DB search
MKRRVEDQEPIFAPQQQQTRRPVQGIADSFQHRALAPAPSAVEAPADNMQPSPGIQFSLP
QGYQVPTMPQSTSGHGHNSAAAAHVGPHAHALAVQSQGPAVAQGHVHPPAPMTSAQGQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHYITPHGISVQNIPMSGASSQPASHNQHQS
LPQAGPHTAAAGAANTAATSAPPTPTLPAPNKTSKPVQSPAHTPTSQPNPSIPSYASPRS
PSVQSHTPVSSTPSGGPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQK
EQRNAKEAAGNYTPSLTEQEVYTQVAKLFKNQEDLLSEFGQFLPDANSTMLLGKSTPDRA
ESVRNDHGGTVKRPLLSNKQRLSQNGLPIRRPPGVGVPPVKKKPKILGKDHSMMEAGKHS
TSTETMFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFK
NFLGYRESSHGESSHMESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRT
PLCREVLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLATIRALE
TVQRRISRMSAEEQLRFKLDNALGGSSEVIHRKALQRIYGDKAHDIIDGLKKNPAASVPI
VLKRLKMKEEEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIE
MLYDDRQERASEEAAAPPPGGPHLTQTYDDSQILEDAAALIIHHVKRQVGIQKEDKYKIK
QIIHHFIPDLLFARRGELSDVEDEEEEEEEDEDVELDPDGPKKHNGLPGGSPSKSKLLFG
GAAAQRARGTEDAYTVFFVNNYWYIFLRLHHILCSRLLRIYGQAEKQIEEDAREREWERE
VLGLKREKNENPAIQLKMKEPLDVDVEDYYSVFLEMVRNLLDGNMEPTHYEDSLREMFTI
HAYIAFTMDKLIQSIVRQLQHLVTDDVCSRVTDMYLSESANKATGGPLSTQASRAAAEGA
YQRRAEQLMTDENCFKLLFAKSRGAVSLSMELLDTEEENSDEPADAERWSDYVGRYLNSD
SASPELREHLFQKPVFLPRNLRRIRKCQRGWERLQQQRMNKAPSEKLPDGELEMQCMFKL
NSYKMVYVCKSEDYMYRHTALTRAHQSQQRVNTRLHRRFHSWLDGWAEQHVSADMAADNR
KWLMGERREALLPCATTRCPEVLHYIPVNKYRVTYRTL
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcgcgtggaggaccaggaaccaatatttgcaccccagcaacagcaaacgcgt
cgcccggttcaaggcattgcagacagctttcagcaccgggccctcgcgccggccccttcc
gcggtagaggcacctgcagacaacatgcagccctcccccggcatccagttctctctcccc
caaggctaccaggtgcccacaatgccccagagcacgagtggacacggacacaacagcgct
gctgctgcgcacgtcggcccccacgctcacgccctggcggtgcagtcccagggccctgcg
gtggcccaaggtcacgttcatccaccggcacccatgacctcagcccaaggacagcagttt
cagcgactgaaggtcgaagacgccctgtcttatctggaccaagtgaagctgcagtttggg
aaccagccccaagtttacaatgacttccttgatattatgaaagagttcaaatcacagagc
atagacactcctggagtcatcaaccgcgtctcccagctgtttaagggacaccccgacctc
atcatgggcttcaacacgttcttgccccccggatacaagatcgaggttcagaccaacgac
ctggtcaacgtgaccacgccgggtcagatccactacatcaccccgcacggcatctctgtt
cagaacatccccatgagcggagcgtccagccaacccgccagccacaaccagcaccagagt
ctgccacaggccggcccgcacactgccgccgccggcgccgccaacacagccgccacctcc
gccccgccaacccccaccctaccggctccaaacaaaaccagcaagccggttcagtctccg
gcgcacacgcccaccagccagcccaacccatccatcccctcctacgcctcgccgcgctcc
ccctccgtccaatcgcacactcccgtgagcagcacgccgtccggcgggccgcccctccag
aacaaccagcccgtggagttcaaccacgccatcaactacgtcaacaagatcaagaaccgc
ttccagggtcagccggacatctacaaagccttcctggaaatcctgcacacataccagaag
gaacaacgaaatgccaaagaggcagccggcaactacaccccatcgctgacggagcaggaa
gtctacactcaggtggcgaagctcttcaagaaccaggaggacctgctgtcagagttcgga
cagttcctgcctgatgcaaacagcacgatgctgctgggcaaaagtacacccgaccgggcg
gagtcggtgcgtaacgatcacggcggcacggtgaagagacctctactgagcaacaaacag
cgtctgagccagaacggcctgccgatcaggagaccacccggagtgggagtcccgcctgtc
aagaaaaagcccaaaatattggggaaggatcacagcatgatggaggcgggcaaacacagc
accagcactgaaacgatgttcttcgagaaggtgaagaaggctctgcggagctccgaggct
tacgacaacttcctgcgctgtcttcacattttcaaccaggaagtgatctctcgcgccgag
ctggtccagttggtcatcccgttcctcggcaaattcccggagcttttcacgtggtttaaa
aacttcctgggctaccgagagtcgagtcacggcgagtcgagccacatggagagtttaccc
aaggagcgagcgaccgagggcatcgccatggagatcgactacgcctcctgcaagaggctg
ggctccagctacagggcgctgcccaaaagctaccagcagcccaagtgcaccggaaggacg
ccgctgtgcagggaggttctgaatgacacgtgggtgtcgtttccatcgtggtccgaagac
tcaacatttgtgagctccaagaagactcagtacgaggagcacatctacagatgtgaggac
gagcgcttcgagctggacgtggtgctggaggccaacctggccaccatccgagccctggag
acggtgcagcggaggatctcccgcatgtcggcggaggagcagctgcgctttaagctggac
aacgcgctgggcggctcctccgaggtgattcaccgcaaagccctccagaggatatacggg
gacaaggcgcacgacatcatcgacggactcaagaagaacccggctgcgtcggtccccatc
gtgctgaaaagattgaagatgaaagaggaggagtggagagaagcccagagaggcttcaac
aagatctggagggagcagaacgaaaagtattacctgaagtctctcgaccaccaaggcatc
aacttcaagcagaatgacaccaaggtgctgcgctcaaagaccttgctcaatgaaattgag
atgctgtatgacgaccgccaggagcgagcgtcggaggaagcggccgcgcccccaccgggc
ggcccccacttgacccagacctacgacgacagccagatcctggaggacgccgccgccctc
atcatccaccacgtcaagaggcaggtcggcatccagaaagaggacaagtacaagatcaag
cagatcatccaccacttcatccccgaccttctgttcgcgcggcggggcgagctctccgac
gtggaggatgaggaggaggaggaggaggaggacgaagacgtggagttggacccggacggc
cccaagaagcacaacggcctgccgggcggcagcccgtcaaagtccaagctcctctttggc
ggcgcggcggcccagagggcgcgcggcaccgaggacgcctacaccgtgttctttgtcaac
aactactggtacatcttcctccgcctgcaccacatcctctgctcccgcctgctgcggatc
tacggccaggccgagaagcagatcgaggaggacgcccgcgagcgagagtgggagagagaa
gttctggggctcaaacgggagaagaacgaaaatccggcaatccaactgaagatgaaggag
ccgctggatgtggacgtggaggactactactcggtgttcctggagatggtgcgtaatctg
ttggacgggaacatggagccgacgcattacgaggactccctgagggagatgttcaccatc
cacgcctacatcgccttcaccatggacaagctcatccagagcatcgtccggcagctccag
cacctcgtcaccgacgacgtgtgctcgcgcgtcaccgacatgtacctgagcgaaagcgcc
aacaaggccacgggggggcctctgtccacgcaggcgtcccgggcggcggccgagggggcc
taccagcgcagagcggagcagctgatgacggacgagaactgcttcaagttgctgttcgcg
aagagccgaggagccgtcagtctgtcgatggagctgctggacacggaggaggagaactcg
gacgagccggcggatgcagagaggtggtcggactacgtgggcagatacctcaactccgac
tctgcgtccccggagctgcgcgagcacctgttccagaaacccgtgttcctccccaggaac
ttgcggcggatcaggaagtgccagagaggctgggagcggctgcagcagcagcggatgaac
aaggcgccttcggagaagcttccggacggcgagctggagatgcagtgcatgttcaagctc
aactcctacaagatggtctacgtctgcaagtcggaggactacatgtaccggcacacggcg
ctcacgcgcgcccatcagtcccagcagcgggtcaacacgcgcctgcacaggcgctttcac
tcctggctggacggctgggccgagcagcacgtgagcgccgacatggccgccgacaaccgc
aagtggctgatgggcgagcggcgagaggccctgctgccgtgcgccaccacccgctgcccc
gaggtcctccactacatccccgtcaacaagtaccgggtgacgtaccggacgctgtag
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