Gasterosteus aculeatus (three-spined stickleback): 120831275
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Entry
120831275 CDS
T07457
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145
Phagosome
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120831275 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120831275 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120831275 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120831275 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831275 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120831275 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120831275 (thbs4a)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Phagocytosis
Opsonins
120831275 (thbs4a)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120831275 (thbs4a)
Exosomal proteins of colorectal cancer cells
120831275 (thbs4a)
Exosomal proteins of bladder cancer cells
120831275 (thbs4a)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120831275 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Laminin_G_2
DUF7630
Motif
Other DBs
NCBI-GeneID:
120831275
NCBI-ProteinID:
XP_040052565
UniProt:
A0AAQ4R5M2
LinkDB
All DBs
Position
XIII:complement(9624889..9633417)
Genome browser
AA seq
945 aa
AA seq
DB search
MMDVWGRVAALSLALQQLVITVTAQGIIYDLLVSPDCLPDLLQGSLKNKGRDEAFLLSSF
RIHSKAPTSLYSVINPKDNSKYLEVSVQAKLSKVTMRYQRTDGRFVTTSFNHGSLADGQD
HHVMLHARGLQGGPPRLNIYVDCRLVHSLDDLPATFGSLPPGPNRVALRTLQSSSKDELT
DLKLVIEDTIDNVATLQDCSMDQRESLQLLSIQGARTEHDQASMEELRSMFSEMKELLIK
QIKETTFLRNTITECLACGLGGNPTDTGPASQPLTQCPPGTCFRQNMCVLSESGAFQCAS
CPEGFTGDGVHCDDVDECKFNPCYPGVRCVNTAPGFRCEKCPLGYNGPEINGVGVSYAKS
RKQVCDDIDECLGPPKDGSCTENSHCYNTIGSFRCGECKAGFTGDQVGGCHGTRLCPNGQ
PSPCHTNGECVVERDGSISCVCGVGWAGNGYVCGKDTDIDAYPDITLQCSDTNCKQDNCI
SVPNSGQEDADRDGLGDSCDDDADSDGIINIDDNCWLVPNVDQKNSDKDLLGDACDNCRT
VENPLQRDTDQDGLGDDCDDDMDGDGIKNALDNCQRVPNRDQEDRDNDVVGDACDSCPDV
PNPNQSDSDDDLVGDTCDDNIDSDGDGHQNTKDNCPTFINSAQLDTDKDGMGDECDDDDD
NDGIMDDDDNCRLVPNPDQKDTDDNNVGDACEGDFDKDSVIDIIDHCPENAEVSLTDFRA
YQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFEGTFHVNTVTD
DDYTGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSKTGPGEYMRNS
LWHTGDTPNQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGSKLVADTDVII
DTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPADYKDLSAQNTE
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtgtggggcagagtagcagctctctctctggcgctgcaacagctggtgatc
actgtcacggctcaaggcatcatctacgacctgctggtgtctccagactgcctgccggac
ttgctacaaggcagcttgaagaacaaagggcgagatgaggcattcctcctctcttccttt
aggatccacagcaaggcccctacctctctctacagtgtcatcaaccccaaagacaacagc
aagtacctggaggtcagcgtgcaggccaaactaagcaaggtaaccatgcgttaccagagg
acagacgggagatttgtcacaaccagtttcaaccacggttccctggcagatggccaagat
caccatgtgatgctccatgccagaggtctgcagggcggtccgcctcgcctcaacatctat
gtagactgcagactggtgcacagtttggatgatctgcccgctacgtttgggtcactcccc
cctggtcccaacagggtggcacttaggaccctgcagtcgagttcgaaggatgaactgact
gacttgaagctggtcatagaagacacaatagacaatgtggcaactctgcaggactgcagc
atggatcagcgtgaatctcttcagctgctgagcatccagggagccaggacagaacacgat
caggcctccatggaggagctgaggagcatgttttctgagatgaaagagctgctcatcaag
cagattaaggagacaacttttttgaggaataccatcacggagtgtcttgcctgtggtctc
gggggaaatccaactgacacgggtccagcaagtcagcctctgacccagtgcccacctggc
acctgcttcagacaaaacatgtgcgtcctttcagagtctggtgcttttcagtgcgcgtcc
tgtcctgaggggtttacaggagacggggtgcactgtgacgatgttgatgagtgcaagttt
aatccatgttaccctggtgtccggtgtgtgaacactgctcctggttttcgctgtgagaaa
tgccctctgggttacaacgggccagagataaacggagtgggagtttcctatgctaagtcc
cgcaaacaggtctgtgacgacatagacgagtgtctgggcccgccgaaggatggaagttgc
actgaaaactcgcactgctacaacacgataggctccttccgctgcggggagtgtaaagcg
ggcttcacaggtgaccaggtgggaggctgccatggaaccaggctttgccccaacggtcaa
cccagcccctgtcacactaatggagaatgtgttgtggagagagacggcagcattagctgt
gtgtgtggcgttggttgggcaggtaacggctacgtgtgtggaaaggacacagatattgat
gcatatccagacattacgctccagtgcagtgacaccaactgtaagcaggataactgcatt
tcagtgccgaattctggccaggaggatgcagaccgggacgggttgggtgactcctgtgat
gacgatgcagacagcgatggcattattaacatagatgacaactgctggctcgtacctaac
gtggaccaaaagaacagtgacaaggatctcctgggcgacgcctgtgacaactgcagaaca
gttgaaaatcccttacagagggacacggatcaggacgggctaggagatgattgtgatgat
gatatggacggggacggcattaagaatgcccttgacaactgccagcgggtccccaacaga
gaccaggaagacagagacaacgatgtggtgggagacgcctgtgacagctgtcctgacgta
ccaaacccaaaccagtctgactcggacgacgaccttgtcggagacacctgcgacgacaac
atagacagtgacggcgatggccaccagaacacaaaagacaattgtcccacattcatcaac
tctgcccagctggacaccgacaaggatggaatgggagatgaatgtgacgatgacgacgat
aacgacggcataatggacgacgatgataactgcagacttgtccccaacccagaccagaag
gacacggacgataacaatgtcggcgacgcatgcgaaggagattttgacaaagacagcgtc
attgacataatcgaccactgcccggagaacgctgaggtcagcctgaccgacttcagagcc
tatcagaccgtcgtgctggatccggagggcgactctcagattgaccccaactgggtggtc
ctgaatcagggcatggagatagtgcagaccatgaactctgaccctggccttgctgttggc
tacaaagctttcagtggggtcgactttgaggggacgttccacgttaacacggtgaccgac
gatgactatactggtttcatcttcggctaccaggactcctcctccttctacgtggtgatg
tggaaacagacagaacaaacctactggcaggccgcacccttcagagccgttgccgaacca
ggaatacaactcaaggtagttaagtcaaagacgggtcctggtgagtatatgagaaactcc
ctgtggcacacgggagacacccctaatcaggtccggctcctgtggaaggaccccaggaac
gttggctggaaggacaaggtgtcctaccgctggttcctgcagcacagaccacaggttgga
tacatcagggctcgcttcttcgagggctcaaaactggtggcggacacagacgtgatcatt
gacacgagtatgagaggcggcagactgggtgtgttctgcttctctcaggaaaacatcatc
tggtccaaccttaagtatcgttgcaacgacactattcctgctgactacaaggatctcagt
gcccagaacacagagtga
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