KEGG   Gasterosteus aculeatus (three-spined stickleback): 120831305
Entry
120831305         CDS       T07457                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120831305 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gat03041]
    120831305 (sf3a1)
Spliceosome [BR:gat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120831305 (sf3a1)
 Complex B
    120831305 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    120831305 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 120831305
NCBI-ProteinID: XP_040052615
UniProt: A0AAQ4P3A0
LinkDB
Position
XIII:complement(13306683..13311583)
AA seq 779 aa
MPPGPVQIVQPEPNNKNEAPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQAMLQSQLSQK
VQVIQEAVVPKEPPPEYEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNY
QFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPREVMDQVKYRVEWAKFQ
ERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQER
YEKYGESEEVEMEVESEDDDDERAVRGEGHPSQPDQDTQVQDMDEGSDDDDDGMKAPLPP
DNPMPPPLPPTPDQVIIRKDYDPKASKAPPSIITPDEYLISPITGEKIQASKMQEHMRIG
LLDPRWLEQRDRGIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGSEETAIGKKIGEEE
IQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDAREKIGPSKPSE
IHHQPPMQSQMNMPKPNPQMTMPRPMQSMPQVRTTLLSAVPVIPRPPMSPVVRLTPGHVI
ASMPPMIPAPRINVVPMPPPAPHMMAPRPPPMVVPTAFVPAPPVPQPPSSAPAPPSHPPP
PHDDEPVNKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPLT
DQVSVIKVKIHEATGMPAGKQKLQFEGIFIKDSNSLAYYNMSNGAVIHLALKERGGRKK
NT seq 2340 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcagattgttcagccggagcccaacaacaagaatgaggctcca
gcagaagaaacccctgccacgaaacccatcgttggcatcatttacccgcctcctgaggtt
cgaaacatagttgacaagacagccagctttgttgccaggaatggacccgagtttgaagca
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaacccaaatgacccg
taccatgcctactaccgtcacaaggtcaatgaattcaaggaggggaaagggcaggaacct
tctgcggcagtgcccaaggttatgcagcaggccatgctgcaatctcagctttctcaaaaa
gtgcaggtgattcaagaggcggtggtccccaaagaaccacctccagagtacgagttcatt
gcggatcctccatctatctcagcatttgatcttgatgttgtcaagctcacggcccagttt
gttgcccgcaacggccgccagtttctcactcagctcatgcagaaagaacagaggaactac
cagtttgacttcctgcggccgcagcacagccttttcaactacttcaccaaactcgttgag
cagtacaccaagattctgatccctcccaaaggccttctgatcaagctgaagaaagaagct
gagaatccacgagaggttatggatcaggtgaagtaccgtgttgagtgggcaaagttccag
gagcgtgagaggaagaaggaagaggaggagagagagaaagaacgtgtggcatatgcccaa
attgactggcatgactttgtggtggttgagacggtggatttccagcccaacgaacagggc
cacttccccccacctaccacaccagaagagctcggcgctcgcatcctgatccaagagcgc
tatgagaagtatggagagagtgaggaggtggagatggaggttgaaagtgaggatgacgac
gatgaacgggcggttcggggcgaaggccacccctcacaaccggatcaagacacacaagtg
caggacatggatgagggatctgatgatgatgatgatggtatgaaggctccattgccacca
gacaaccctatgccacccccactgccgcctactccagaccaggttatcattcgcaaagac
tacgaccccaaagcttccaaggctccgccctcgatcataactccagacgagtatctcatc
tcgccaattactggtgagaagatccaagccagtaagatgcaagagcacatgcgtattggt
ctgctggatccgcgctggctggaacaacgggaccgcggcatccgagagaggcagaccgaa
gatgaggtctatgcccccggtttggatatcgagagtagcttgaaacaactggctgaaagg
cgaacggatatcttcggttcggaagaaacagccatcggtaagaagattggtgaagaagaa
atccagaagccagaggagaaggttacatgggacggccactctggcagcatggctcgtacc
cagcaggcagcacaggccaacatcaccctgcaagagcagatcgaagccattcacaaggcc
aaaggactggtgggagaggacgacgccagggagaaaattggcccaagcaagccgagtgaa
attcatcaccagccacccatgcagtctcaaatgaatatgcccaaacccaatccccaaatg
acgatgcctcgcccaatgcagtctatgccacaagtgcgcaccactctcctgtctgctgta
cctgtgattccgagacccccgatgtctccggtggtgcgcctcacaccaggtcacgttata
gcatccatgcctcccatgattcctgctccccgcatcaatgtggtccccatgccgccacca
gcacctcacatgatggcacccagaccacctcccatggttgttccaactgcatttgtcccc
gcccctccagtaccacaacccccaagctctgctcctgcgccaccatcccacccgccgcca
cctcatgacgatgagccagtcaacaagaagatgaagacagaggacaaccttattccagaa
gaggagttccttcgtagaaataagggtcctgtggcagtcaaagtacaggtacccaacatg
caggacaagaccgaatggaagctgaacggccaagtgctcaatttcactgtcccgctcacg
gatcaggtatctgttattaaagtcaaaatccacgaagctacgggcatgccagcaggaaaa
cagaagttacaattcgagggcattttcatcaaagattccaactcgctggcttattacaac
atgagtaatggcgccgtcatccacctggcactcaaggagagaggtggaaggaagaagtga

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