KEGG   Gasterosteus aculeatus (three-spined stickleback): 120831315
Entry
120831315         CDS       T07457                                 
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:gat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120831315 (usp30)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gat01002]
    120831315 (usp30)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gat04131]
    120831315 (usp30)
   04121 Ubiquitin system [BR:gat04121]
    120831315 (usp30)
Enzymes [BR:gat01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     120831315 (usp30)
Peptidases and inhibitors [BR:gat01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   120831315 (usp30)
Membrane trafficking [BR:gat04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    120831315 (usp30)
Ubiquitin system [BR:gat04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    120831315 (usp30)
SSDB
Motif
Pfam: UCH UCH_1 DUF5700
Other DBs
NCBI-GeneID: 120831315
NCBI-ProteinID: XP_040052625
UniProt: G3P2F7
LinkDB
Position
XIII:8935730..8940856
AA seq 510 aa
MLWWRPESSDKLVGEFLGTGPIVRSKMIKNWGVIGGIAAAVAAGVYVLWGPITERKKKRR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEIFSGSPMIQSCKDNQLSTTLLQLLNAL
SRDQPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVAHLF
DMQTLESPPDPVEKTMICRSRAPLHCIPSPWKSPHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLPIPLPQWGRPISLDQCLQHFISSETIKEVECGNCTKLQQGNALNGQVLQSQRTT
FIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEHLSMDRYKHKASTHRNQRIK
CAANSRNVDNADDATEKPSTNGTEAKDLHNNNKPFSNGTCSSVFLPSPGVTPLLGLAYDY
SGARPSSSVEYLFQLTAVLVHHGDMHSGHFVTYRRGPTSPPSAPPVSSQWLWVSDDSVRK
ASQHEVLSSNAYMLFYERVRRRDPAPHSEE
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgttgtggtggagaccggagagctccgataagcttgtcggggagttccttggcactgga
cccatagtcaggagcaagatgataaaaaactggggtgtcattggtgggatagctgctgcc
gttgcagctggcgtatacgttttatggggccccattacggagagaaagaagaaaaggaga
ggcatggttcctggtctgttgaatttaggcaacacctgcttcctgaactctctgcttcag
ggtttggcagcatgtccgtcgttcatcaggtggctggaaatcttctccggttcccccatg
atccagtcctgcaaggacaaccagctgtccacaacgctgcttcagcttctcaatgctctg
tccagggatcagcccggggaagaagatgttcttgatgccgggtgcctcctggatgttcta
agactttaccgctggcacatcagttcatttgaagagcaggatgcgcatgagctttttcac
gtccttacatcttctctggaagaggagcgggatcgtcaacccaaagtcgctcacttgttt
gacatgcagacgcttgagagcccccctgatccagttgagaaaactatgatctgcagaagt
cgcgcccctcttcattgtataccaagtccgtggaagtctccacatcctttccatgggcgt
ttaacaagcaatatgtcatgcaagcgctgtgaacaacaaagtccagtgcggtatgactca
tttgagagcctctccctccccatccctttacctcagtggggtagacctatctctctagat
cagtgtcttcagcatttcatctcctctgaaaccatcaaagaagtagaatgtggaaactgc
accaagcttcaacaaggaaacgcattaaacggccaagttttgcaaagccagaggacaaca
ttcattaaacagctcaaactcggaaagctcccccagtgcctatgtatccatttacaaaga
ctgacgtggtctagtgaaggaacgcccatcaaaagacaggagcacgtgcagttcacggag
catctgtcgatggaccgctacaaacacaaagcttccacacacagaaatcagagaatcaaa
tgtgctgcgaactccaggaatgtcgacaacgcagatgatgccacggagaagccttccacc
aacggcaccgaagcaaaggatctgcacaacaacaacaaacctttttccaacggaacatgt
tcgtccgtattccttccgtctcctggtgtgaccccgctgctcggcctcgcgtacgactac
agcggcgcccgtccttccagttctgtggagtacttgttccagctcacggccgtgctggtt
caccacggcgacatgcactcgggacactttgtcacgtaccgccgcggccctacgtcacct
ccctccgctccacccgtcagctcccagtggctctgggtttcagacgactccgtgcgaaaa
gccagccagcacgaggtgctctcttccaacgcctacatgctcttctacgagagagtccga
cgacgcgacccggcgccccactcggaggagtga

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