Gasterosteus aculeatus (three-spined stickleback): 120831315
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Entry
120831315 CDS
T07457
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120831315 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120831315 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831315 (usp30)
04121 Ubiquitin system [BR:
gat04121
]
120831315 (usp30)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120831315 (usp30)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120831315 (usp30)
Membrane trafficking [BR:
gat04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
120831315 (usp30)
Ubiquitin system [BR:
gat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120831315 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
120831315
NCBI-ProteinID:
XP_040052625
UniProt:
G3P2F7
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All DBs
Position
XIII:8935730..8940856
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AA seq
510 aa
AA seq
DB search
MLWWRPESSDKLVGEFLGTGPIVRSKMIKNWGVIGGIAAAVAAGVYVLWGPITERKKKRR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEIFSGSPMIQSCKDNQLSTTLLQLLNAL
SRDQPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVAHLF
DMQTLESPPDPVEKTMICRSRAPLHCIPSPWKSPHPFHGRLTSNMSCKRCEQQSPVRYDS
FESLSLPIPLPQWGRPISLDQCLQHFISSETIKEVECGNCTKLQQGNALNGQVLQSQRTT
FIKQLKLGKLPQCLCIHLQRLTWSSEGTPIKRQEHVQFTEHLSMDRYKHKASTHRNQRIK
CAANSRNVDNADDATEKPSTNGTEAKDLHNNNKPFSNGTCSSVFLPSPGVTPLLGLAYDY
SGARPSSSVEYLFQLTAVLVHHGDMHSGHFVTYRRGPTSPPSAPPVSSQWLWVSDDSVRK
ASQHEVLSSNAYMLFYERVRRRDPAPHSEE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtggagaccggagagctccgataagcttgtcggggagttccttggcactgga
cccatagtcaggagcaagatgataaaaaactggggtgtcattggtgggatagctgctgcc
gttgcagctggcgtatacgttttatggggccccattacggagagaaagaagaaaaggaga
ggcatggttcctggtctgttgaatttaggcaacacctgcttcctgaactctctgcttcag
ggtttggcagcatgtccgtcgttcatcaggtggctggaaatcttctccggttcccccatg
atccagtcctgcaaggacaaccagctgtccacaacgctgcttcagcttctcaatgctctg
tccagggatcagcccggggaagaagatgttcttgatgccgggtgcctcctggatgttcta
agactttaccgctggcacatcagttcatttgaagagcaggatgcgcatgagctttttcac
gtccttacatcttctctggaagaggagcgggatcgtcaacccaaagtcgctcacttgttt
gacatgcagacgcttgagagcccccctgatccagttgagaaaactatgatctgcagaagt
cgcgcccctcttcattgtataccaagtccgtggaagtctccacatcctttccatgggcgt
ttaacaagcaatatgtcatgcaagcgctgtgaacaacaaagtccagtgcggtatgactca
tttgagagcctctccctccccatccctttacctcagtggggtagacctatctctctagat
cagtgtcttcagcatttcatctcctctgaaaccatcaaagaagtagaatgtggaaactgc
accaagcttcaacaaggaaacgcattaaacggccaagttttgcaaagccagaggacaaca
ttcattaaacagctcaaactcggaaagctcccccagtgcctatgtatccatttacaaaga
ctgacgtggtctagtgaaggaacgcccatcaaaagacaggagcacgtgcagttcacggag
catctgtcgatggaccgctacaaacacaaagcttccacacacagaaatcagagaatcaaa
tgtgctgcgaactccaggaatgtcgacaacgcagatgatgccacggagaagccttccacc
aacggcaccgaagcaaaggatctgcacaacaacaacaaacctttttccaacggaacatgt
tcgtccgtattccttccgtctcctggtgtgaccccgctgctcggcctcgcgtacgactac
agcggcgcccgtccttccagttctgtggagtacttgttccagctcacggccgtgctggtt
caccacggcgacatgcactcgggacactttgtcacgtaccgccgcggccctacgtcacct
ccctccgctccacccgtcagctcccagtggctctgggtttcagacgactccgtgcgaaaa
gccagccagcacgaggtgctctcttccaacgcctacatgctcttctacgagagagtccga
cgacgcgacccggcgccccactcggaggagtga
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