Gasterosteus aculeatus (three-spined stickleback): 120831380
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Entry
120831380 CDS
T07457
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120831380 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120831380 (rapgef1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
120831380
NCBI-ProteinID:
XP_040052736
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Position
XIII:20670445..20683330
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AA seq
965 aa
AA seq
DB search
MSSRAESKTASQFVSLTMRLKDKLHPQRIKRFEQIKQTPSQTPKPLDLNLQRTLQEKSVC
VLADEQRAVISSLQYFKALVDRLGVDKQVLDQSVVGGLLGGASSRVLEAVQTLVQLEPHL
HNSKTVTSCLTRLYLSLAQLIRWADEVMLQGIAHGNQDSTASVTLVIRAVLDGVKELVRL
AAERRGDSAPLSPVQFGVTEGQTCVFDDVVKSEGTSAGALAEEDEEKKKTSWAPPKPPMP
LTELISPVSLPVVSQPPVSFPHVSLNHASQTQMALPPASQPQVSLPRVSTQGLSPPTLPP
KRRQSMGPAPCRVAIVAPMRRETEVNRQSQLQEDAGLKCDSFSSAESAAENTHCGEEEED
PDYNFLLTDSSSFEPPLPLPHPSSLPPNLPEKRRCSTAGPTLSQPSSFSFDPPPHEQRPS
HCDDDIGPDELGSSPKSPSKTPPPLPEKKLHIHQYLQFCSTYSAQSAAMFYQRPLTSGQR
YSSRQRELETTYRLAHTHLDTQTLDSTPLPELLPAPVLPAKKRQQDPGGPYEEDPASDSL
QQEAELKRRSRELQEEVLLTDGQEVLRRIIMKPQGEDGPDVKAASAEILLVHATMAHSEQ
VVYREAFLSTFRSFISPEDVIIKLQHRYKHLCKQRDPERIAAANNTFHLLVSVVDELCAI
ELDSNLLLLLMDLVFSLLIGGELRLACLLRSNILSKLEQRWHMIGSPQSLRPLAAKGVAA
RPGTLLDFRSQDLAEQLTLLDSELFCKIELPEVLLWSKEQNEEKSPNLKEFTQHFNNVSF
WVRSVIILQDKSQDREKLLLKFLKTMKHLRRLNNFNSYLSILSALDSAPLRRLDWQRHTA
EALEEFSSLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDTLMTSQGSKV
NFSKRWQQFNILDTLRSYQQVPYTLQPNDDIISFFNDFSDHLAEEALWELSLRLRPRNAP
RANQR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgggccgagagtaagacagcttcccagtttgtgtctctcaccatgaggctg
aaggataaacttcacccgcagaggatcaaacgctttgagcaaatcaaacaaaccccgtca
cagacacccaaaccattagatctgaacctgcaacgcactctgcaagaaaagtcagtgtgt
gtgttggcggatgagcagcgggccgttattagctctcttcagtacttcaaagctctagtg
gacagactgggagtggacaaacaggttctggaccagtctgtggtgggcggtctgttgggt
ggggcatccagcagagtccttgaagcggtccagactctggtccagttagagccacaccta
cacaacagtaagaccgtcacttcctgtctcactcgtctctacctgtctctggctcagctg
attcgctgggccgatgaggtaatgctgcaaggtatcgcccacggcaaccaggactcaaca
gccagcgttaccttggtgatcagggcagtgctggacggggtcaaggaacttgtgcgattg
gctgcagagagacgaggcgactctgctccattgtctcctgtccaatttggggtcaccgag
ggacaaacttgtgtgtttgatgacgtggtgaaatcagaggggacgtctgcaggagctctt
gcagaggaagacgaggagaaaaagaagacgtcttgggctcctcctaaacccccaatgccc
ctcacagaactcatctctccagtgtccctccctgttgtgtcccagcctccggtgtccttc
cctcatgtgtccctcaatcacgcctcccaaactcagatggccctccctcctgcgtcccag
ccacaggtgtctctcccccgagtgtccacacaggggctcagtcctccaaccttgccgcct
aaaagacgtcaatctatgggccccgccccctgcagggtcgccatagtagcaccaatgaga
cgagagactgaagtcaacagacagagtcaactacaggaggacgccggtttgaagtgcgac
tctttttcttctgcagagtctgctgctgagaacacacactgtggagaagaagaagaagat
cctgactacaactttctgctcactgactcctcctcctttgagcctcctcttcctcttcct
cacccatcatcactcccccccaacctcccagagaagagacgctgcagtactgcaggaccg
accctctcccagccctcttcatttagctttgacccccccccccatgaacagaggccctcc
cactgtgatgatgacattggacctgatgagttgggctcctcccccaagtctcccagcaag
acgccccccccactccctgagaagaaactacacatccatcagtaccttcagttctgttcc
acctatagcgctcaatcagcagccatgttctaccagcgacctttgacctctggccagcga
tacagtagcaggcagcgggagctggagaccacctaccgcctggcgcacacccacctggac
acacagacattagactccacccccttacctgagctacttcctgctccagttctaccagca
aagaagagacaacaggatccaggtggaccgtacgaggaggacccggcatcggacagtctc
cagcaggaggcggagcttaagaggaggagcagggagctgcaggaggaggtgctgctgacc
gacgggcaggaggtcctccgcaggatcataatgaagcctcagggggaggacgggccggat
gtcaaagcagcgtctgctgagatcctattggtccatgcgacaatggctcacagcgaacaa
gttgtgtaccgtgaagccttcctctccaccttcaggagcttcatcagtcccgaagacgtc
atcatcaaactgcagcacagatacaaacacttgtgtaaacaaagggaccctgagcgcatc
gccgctgccaacaacaccttccacctgctggtcagcgtggtggacgagctgtgtgccata
gagctggactctaacctgctcctcctcctgatggacctggtgttcagcctcctgattggc
ggagagctgagacttgcttgtctgctgcgctccaacattctgtccaagctggagcagagg
tggcacatgattggttctcctcagtcgctccgccctctcgcagctaagggcgtggctgca
agaccaggaactcttctggacttcaggagtcaggatctagctgaacagctgactctgctt
gactcagagctcttctgcaagattgagcttccagaggtgttgctgtggtctaaagagcag
aatgaggagaaaagtccaaaccttaaagagttcacacaacacttcaacaacgtctccttc
tgggttcgttccgtcatcattcttcaggataaatcccaagaccgagagaaactgctgctg
aagttcctgaagaccatgaagcacctgcggaggctcaacaactttaactcctacctgtcc
atcctctctgcgttagactccgcccccttgaggcgccttgactggcagagacacactgct
gaggctctggaggaattcagctctttgattgacagctcgtcgtctttcagagcctacaga
gcagctctagctgaggtggaacctccgtgtataccctacctggggttgattctccaggac
ctgactttcgtacaccttgggaatcccgacacgttgatgacatcacagggttcaaaggtc
aacttctctaaacgctggcagcagttcaacatcctggacaccctgagaagctaccagcaa
gttccttacacgctgcagcctaatgatgacatcatatcgttcttcaatgacttcagtgat
cacctggcagaggaagcattgtgggaactttcgctcaggctccgcccacgaaatgcccca
cgagccaatcagagatga
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