Gasterosteus aculeatus (three-spined stickleback): 120831485
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Entry
120831485 CDS
T07457
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120831485 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831485 (dmxl2)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120831485 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120831485 (dmxl2)
RAVE complex
120831485 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_DCAF12
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_ACSF4
Beta-prop_SCAP
NBCH_WD40
VPS11_N
Motif
Other DBs
NCBI-GeneID:
120831485
NCBI-ProteinID:
XP_040052867
LinkDB
All DBs
Position
2:complement(18459475..18493008)
Genome browser
AA seq
3123 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDVVILATDFDCVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCVFEPLSTNPNKRHKQLNYQWQKTGQFFLEAITYNLAWDP
QGNRILAATERLQLWAPPVAYALIEEEDAQLNEDKAYPVLNDWNCVWQCKTAASVHIAKW
SPDGEYFATVGKDDCLLKVWYPTTGWRSAVVVHDPSDKRPPPVHFSFVYLAHPRSVTGMS
WRRTSKYMPKGSVCNVMLTSCEDGVCRMWSETLLPEDSLLGGQISENIHSTSSSLPGLAG
NKDKIQHALESIHHLKHLRRGRRRSSSLVAHSELLPSQLGTQDAHTHRHIAHHANALCHF
HISASINPNTDIPSALADSAVFNPDDGTGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKFS
EQHVDQTTEDPLDPEGSTIKFDFDLDEMSDKASSEQGEEGEPGEQGSTKASSPGSNSSMP
LPSMLLERKMETLITEWNKSPDMLFTIHPNDGSFLVWHVKYLDEFNQGIFRQVQVSFSSR
IPVAFPTGDANSLSKNILMYACTLTEGASAEEQGRMVQRVSHSASASASLGSNALAASLN
PRPGISPAVMMVSKHVDGSLNQWAVTFAERSAFSNVMNVSHKFRYCGHRFHLNDQACHTV
LPLLLTSSHHNALLTPPSAPSSLEGEQPPTFSLAKGPFSNRKQLRNAATRTFHDPNAIYS
ELILWRVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSASACFV
ASDGKNLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQC
GANTQLLHVFQEDFILGYKPQTEPEAFPPAFPCGEDYQPAPFSEKFFLVVIEKDLNRNSV
LQMWHLHLKSVQACVDERSPDSSFQSELMVPNQAVNADSSPETSPIRPLPRSASTANLQS
ASKLILSSKLVYSKRLDLPHGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRF
WHCAVEGDDGYSEDDRDTRCYRWEPWALMNEEEDNNSAVCVSGRPVAVSCSYIGRLAIAF
KKPRQGQLQGSAEDFSMHVSIYECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNL
FVYSRSDLYMSRDHSSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVINEPIS
SKDGVAVITLPLGGSIKQGIRSRWILLRAVDVLSSVDGTPSLPVSLSWVRDGILVVGMDC
EMHVYAQWHQDKKPGEGEEGNLSSADIAGGQSAGSSSAFEGRSRSKSVFEGGVAVDEALR
APAGLQEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILAHLVKCIAGEVAVVR
DVEAGEGGARRHLSRTISVTGSTAKDTIVAGRDGGRDYTEINSIPPLPLYSLMLADLDTS
YKGAEEGAKGAKVDSDGSQKSAEDQYSDLFQVQSVTTDDYLSFATDKPEKKSRVINLSQY
GPTYFGPEHAQVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSAEVTSSTDQKCTGGEA
LDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEELLNMIPAMQ
RGDLQWSELKAVGVGWWVRNINTLRKMVEKLGKAAFQKHNDPLDAALFYLAMKKKAVLWG
LFRSQHDEKMTQFFKNNFSEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVL
LEKMEDLQLAMIVARLYEADFENSSTCQGLLYEKVLGCNRDGSGYHCSRLHPDPFLRSIA
YWIMKDYTRALDTLLERIPKDGDENPDVTVKACNPVVFSFYNYLRTHPLIIRRHFANPEA
TATTVGFTAEKNSAVEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKKSSSLPL
RKASSKGNVSSNKLLENGTQGGVEWGAPAAPVHAWGANDSVGGLDWSQPLVKVEEDELKL
DWDQDKEDDDEEEEEDGLTMKKPEAETKVEGGSESDDSKLKKEESQSESEVDVIAEQLKF
RACLKILMTELRTLATGFEVDGGKLRFQLYSWLEKEIAAMHTICNYKVEGKDEDSEVERW
RARTASVDISDDALERTEAGAYERHQMERRRLQAKQQHSERRKAWLRKNQALLRVFLSYC
SLHGAKGGGVTSVRMELLFLLQESQQETTVKQLQSPLPLPTTLPLLSACIATTKTVIANP
VLHLSNHIHDILHTITLLETTPHPDIMDDRVNALHTLAASLSACVYQALCDSHSYSSQTE
ANQFTGMVYQGLLLSARKRLRTESIEEHVTPNSAPAQWPGVSSLISLLTSAREADQPRLN
VLLCEGVMAVYLALLIHGLGTHSSNELFRLAAHPLNNRMWAAVFGGGARLIIKPKRTEAP
PVPADFEAARPEDSQEAGRPEQNSPTPNPTHTPTETLCPKRPPPPVSRGEGLGTVAPATK
TGSAPPQVPAEDGDRYRRRFNMRMLVPGRPVKETPATPPPVPPERPAYREKFIPPELSMW
DYFVAKPFLPLSDSNALCDSDESGAEEDEDDDDAFLSDTQMTEHSDPNSYSWALIRLAMV
KLAHHNVKNFLPITGLDFAELPVVSPLSNAVLKTLEHWEQLLLERMNKFDGPPPNYINTY
PTDLSAGGGPAILRHKAMLEPDNTPFKTKNTQSFPARRLWHFLVKQEVLQETLIRYIFTK
KRKQCESVENHMDRINPNCIAGASGPYKVEADLGYPGGKARIIHKESDIIMAFAINKSNS
NEIVLASTHDVQEVDVSTLVAVQPFTWIGDEFDKESRSSDDMDHRSSHTNIAQASSAPFA
PPQMQVSASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIYQYYMTGAQDGSVRMFEWN
RPQQLICFRQAGNARVTRLYFNSQGNKCGVADGEGFLSLWQVNQTSSNPKPYLSWQCHSK
TCGDFDFITSSSLIATAGQSNDNRNVCLWDTLVSPSNTMVHAFPCHENGATVLQYAAKQQ
LLITGGRKGFVCVFDIRQRQLLHTFQAHDSAIKALALDAFEDFFVTGSAEGNVKVWKLAG
HGLMHSFSTEHAKQSIFRNIGNGVMKVETRPGNRIFTCGADGTLKMRVLPDRYNIPSSLV
DVL
NT seq
9372 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtgctgacgggagctgtgaaccccggagactgctgctactcggtg
gggagcgtaaacgacattcctttcacggcctatggctcgggttgtgatgttgtgatcctg
gccaccgacttcgactgtgtgcagattatccccggggctcagaatggaaacatacaggtg
ggctgtgtggagtgctcccaccagctcggcaggattgctgcttcttacggaaacacagtc
tgcgtcttcgagccgctttccaccaacccgaacaaacggcacaagcagcttaactatcag
tggcaaaagacaggacagttcttcctcgaagccatcacctacaacctggcctgggaccca
caagggaaccgcatcctggcggcaaccgagcggctccagctgtgggctccgccggtggcg
tacgccctgatagaggaggaggacgcacagttgaacgaggacaaggcctaccctgtcctt
aacgactggaactgtgtctggcagtgcaagactgcagcatctgttcacattgccaagtgg
tctcctgatggcgagtactttgcaacagtcggaaaggatgactgtttgcttaaggtgtgg
tatcccaccacgggctggcgttctgcagtggtggtccacgacccgtccgacaaaaggcct
cctcctgttcacttctccttcgtttacctggctcatcctcgctctgttacgggtatgtcc
tggaggaggaccagcaagtacatgcccaagggttcggtgtgcaatgtgatgctgacttcc
tgcgaggatggtgtgtgtaggatgtggtcagagaccctgctcccggaagacagcctgctg
ggtggacagatctctgagaacatacactccaccagctccagcctgccgggactggccgga
aataaggacaagatccagcatgctttggagtccatccatcacctgaagcatctgcggcga
ggccggcggcgatcctcctctttggtggctcacagtgagctgctgccctcacagctcggc
acgcaggacgcacacactcaccggcacatcgcccatcacgccaatgccctgtgtcacttc
catatctccgctagtattaaccccaacacagacatcccatcagcgctggctgactctgca
gttttcaacccggacgatggcaccggtggcggagggttcgttgttcactggctcaacaat
aaggacctcagcttcacaacctccatggacctctttatgctgcagctccgtaaattctct
gaacagcacgtggaccagacgactgaggaccccctggaccccgagggatccactatcaag
tttgactttgacctggacgagatgtccgacaaagcgtcctctgagcaaggagaggagggg
gagcccggggagcagggaagcactaaggcgtcctccccgggatccaactccagcatgcct
ttgccctccatgctgctggagaggaagatggagactcttatcacagagtggaacaaaagc
ccagacatgttgttcaccattcatcctaacgatgggtccttcctggtttggcatgtgaag
tatctggacgaattcaaccagggaatcttcagacaggttcaggtgtccttctcctcccgt
attccagtggcgtttcctacaggtgatgccaactccctgagtaaaaacatcctgatgtac
gcctgcactttgactgagggtgccagcgccgaggagcagggcaggatggttcaacgcgtc
tcccactctgcttcagcctcggccagcctcggttcaaatgcattggccgcctctctgaac
cctcggcccggcatcagtcccgctgtcatgatggtctccaaacacgttgatggatctctc
aaccagtgggcagtgacatttgcagagcgctccgccttctccaacgtaatgaacgtgtcg
cacaagttccggtactgcggccaccgcttccatctgaacgaccaagcctgccacacagtg
ctgccgctgctgctgacctcttctcaccacaatgcactactcacccctccctcggcccct
agcagcctggaaggagagcagcctcctaccttttcactagcaaagggacctttcagtaac
aggaagcagcttcgtaatgcagctacgaggaccttccacgaccccaacgccatctacagt
gaacttatcctgtggagggtggaccacattggacccctttcctgcactggaggggtctcc
gagctggcccgcattaactctctgcacacctcagccttcagcaatgttgcttggctacct
acactagtacccagctctgtacttggaacttactgtaacagcgccagcgcctgcttcgtg
gcgtcagatgggaaaaacctccgtctctatcaagctgtggtggatgccagaaaactactg
gatgagctgtcagaccctgaaacgtctaaactggtgggcgaagtgttcaacatcgtcagc
cagcagtccactgccagacccggctgtatcatagagttggacgtcattacaaatcagtgt
ggcgccaacacccagctgctgcacgtcttccaagaggacttcattctaggttacaagcct
cagacggaaccagaggcattcccaccagcctttccatgtggcgaagattaccaaccggcc
ccgttctctgagaagttcttcctggtggtgattgaaaaggatctcaacaggaactctgtc
ctgcagatgtggcacctgcacctgaagtctgtgcaggcctgtgttgatgagcgcagccca
gatagcagcttccagagcgagctgatggttcccaatcaagctgtgaatgctgactcgtct
ccagagacctcgccgatcaggcctctgcctcggtcggcctccacagccaatttgcaatca
gccagcaaactcatcctcagctccaagctggtgtacagcaagcggctggacctgccccac
ggggtggaggtcaccagggccaccccctctgcaggtcatctgagctcctcttccatctac
cccgtgtgcctggctccgtacctgatcgtcaccacctgctctgactctcgagtgcggttc
tggcactgtgccgtggagggtgacgacgggtatagcgaggatgaccgggacacccgctgc
taccgctgggagccctgggccctgatgaacgaggaggaggacaacaacagcgctgtgtgt
gtgtccggacggcctgtagcggtgtcctgctcctacatcggcaggctcgccattgccttt
aaaaagcctcggcaagggcagctgcagggctctgcagaggacttctccatgcacgtgtcc
atctatgagtgtgaatctactggcggctcagagtgggttttagagcaaactctccacctg
gacgacttcaccagaccctcgtcgaccctggatccgagagtcagcgtggactccaacctc
tttgtgtacagcaggtctgacctgtacatgagcagagaccacagctcccccaacattaag
cactacgttcacttggactggctgtcaaaggaggacggatctcacatcctcaccgtggga
gtggggtccaacatcctcatgtacggccgtatctccggcgtgatcaacgagccgataagc
agcaaggacggcgtggcggtcatcacccttcccctagggggcagtattaaacagggcatc
cgctcgcgctggatcctgctacgggccgtggacgtgctgtcctccgtggacggcaccccg
tctctgccagtttccctgtcctgggtgagggatggcatcctggtggtgggcatggactgt
gaaatgcacgtgtatgcccagtggcatcaggacaagaagcccggagagggagaggagggc
aacctgtcgtccgcagacattgctggaggtcaaagcgcaggttcctcctcggcttttgaa
ggcagatccaggtctaagagtgtgttcgaaggaggcgtcgcggtggatgaggcccttcgt
gccccggcgggacttcaggaagggggactgtttgaagcggctcactccctgtctccgact
ctaccccagtaccatcccacccagctgctggaactcatggacctgggcaaggttcgccgt
gccaaggccatacttgctcacctggtgaagtgcattgccggggaagtcgctgtggtgagg
gatgttgaggcaggtgagggcggagccaggagacatctgtcccgcactatcagcgtgacc
ggcagcacagctaaagacaccattgtggccggccgcgacggggggagggactacacagag
atcaactccatccctccgctgcccctctattccctcatgttggctgacctagacacctcg
tacaagggagcggaagagggcgccaagggagctaaggtggatagtgatggatcccagaag
tcagcagaggaccagtattccgacctcttccaggtccaatccgttaccacagatgattat
ctgtcctttgccaccgacaagccagagaagaagtctcgagttatcaacctctcccaatat
gggccgacctactttggccctgagcatgctcaggttttatccagtcacctcatgcactca
agcctaccaggactgaccaggctagagcagatgttcttggtggccttggccgatactgtt
gcaaccaccagtgctgaggtcaccagctccactgaccagaagtgcacaggcggtgaggcc
ctcgacgagtgtggcctgaggtacctgttggccatgcgtcttcacacctgcctgctcacc
tctctgccccccctctaccgcatgcagctgctccaccagggcctatcaacatgccacttt
gcatgggccttccactctgaggccgaagaggagctgctcaacatgatcccggccatgcag
agaggcgacctgcagtggtctgagctcaaagctgtcggagtgggttggtgggttcgtaac
atcaacactctgcggaaaatggtggaaaagttaggtaaagctgcgttccagaaacacaac
gatcctttagatgctgcgcttttctacctggccatgaagaagaaagctgtgctgtggggg
ctcttcaggtctcagcatgatgagaagatgactcagttcttcaagaacaacttcagtgaa
gaccgctggcgaaaggcagctttgaaaaatgctttctccctgctggggaagcagcgcttt
gaacagtccgctgcctttttcctactggctggatcactcaaagacgccattgaggttttg
ttggagaagatggaggacctccagttggccatgatagtggcaaggctgtacgaggctgac
tttgagaactcctccacctgccaaggcctcctttacgagaaggtcctgggttgtaacagg
gacggaagcggttaccactgttccaggcttcacccggacccgttcctccgcagcatagcc
tactggatcatgaaggattacacgcgagctctggacacactgctggaacgaatccccaaa
gatggtgatgaaaaccctgatgtgacggtgaaagcttgcaaccccgtggtgtttagtttc
tataactacctgaggacgcaccctttgattatccgtcgccacttcgcgaacccggaggcc
acagcgacaactgtgggcttcaccgccgagaagaacagcgccgttgagatcaacctcatc
gagcgcaaactgttcttcaccactgccaatgcacacttcaaggtgggctgcccagttctg
gctctggaagtgctctcaaagattcccaaagttaccaagaaatctagttccttacctctc
aggaaagcatcatccaaaggaaacgtaagctcaaacaaactcctggaaaatggcacccag
ggaggcgtggaatggggcgcccccgcagcccctgtgcatgcgtggggagcaaacgatagt
gtgggggggttggactggagccagcctctggtgaaggtggaggaggacgagctgaagctg
gactgggaccaggacaaggaagatgatgatgaggaggaagaggaggatggtctgaccatg
aagaaaccagaggctgagaccaaagtcgaaggaggctcagagagtgacgactccaaacta
aagaaggaggagtcacagagtgagtcggaggtggacgtgatagcggagcagctgaagttc
cgcgcctgtctgaagatcctgatgaccgagctgcgtacgctggccacaggcttcgaggtg
gacggagggaagctccgctttcagctttacagttggctggagaaggagatagctgccatg
cataccatctgcaactacaaggtggaagggaaggacgaagattccgaggtggagcgctgg
agagcgcgcacggcatcagtggacatatcggacgacgccctggagcgcacggaagccggg
gcgtacgagcgtcaccagatggagcggcggcgtctccaggccaagcagcagcactctgag
aggcgcaaggcgtggctgaggaagaaccaggccctgctgagggtgtttctgtcctactgt
agccttcacggagccaaggggggaggagtcacgtccgttcgcatggagcttctgttcctt
ttgcaggagagccagcaggagaccacggttaagcagctgcagtctcctctgcctctgcct
actacgctgccgctgctatcggcgtgcatcgcaaccaccaagacggtcatcgccaaccca
gttctccacctcagcaaccacattcacgacatcctccacaccatcaccctcctggagacc
acgccgcatcccgacatcatggatgatcgggtgaatgctcttcatacactggcagcatct
ctttctgcttgcgtctatcaggcactgtgtgacagccacagctacagcagccagacggag
gccaaccagtttacagggatggtgtaccagggcctgctgctcagtgcgaggaagcgactt
cgcacggagagcatcgaagaacacgtgactcctaactccgctcctgcacagtggccaggt
gtgtcgtccctgatctcgctgttgacgtctgccagggaggcggaccagccgaggctcaac
gtgctgctgtgtgaaggggtcatggcggtttatctcgcgctgctcattcacggcctgggc
acccacagcagcaatgaactcttccgcctggcagcgcacccgctcaacaaccgcatgtgg
gccgctgtctttgggggaggggccagactcattattaagccaaagagaactgaggcccca
ccagtgcccgctgattttgaggcagccaggccagaggactctcaagaggcaggaagacct
gagcagaacagccccaccccaaaccccactcacacccccactgaaacgctgtgtcccaaa
cgaccccctcctcccgtttcaaggggagagggtttaggcactgtggctccagcaactaag
accggctcggctccccctcaggtgccagcggaggacggggaccgctaccgacgcaggttc
aacatgaggatgctcgttcccggacgtcctgtgaaggagaccccagccaccccccctccg
gtgcccccggagaggcccgcgtacagggagaagttcattcccccggagctgagcatgtgg
gactactttgtggccaaacccttcctgccgctgtcggacagcaatgctctgtgtgactcg
gacgaaagcggcgcggaggaggacgaagacgacgacgacgccttcctctctgacacgcag
atgacggagcactccgaccccaactcctacagctgggctctgatccgcctggcgatggtg
aaactggcccatcacaacgtcaagaacttcctccccatcaccggccttgactttgcagag
ttgccagtcgtctcccctctcagcaacgccgtgttgaagacgttagagcactgggagcag
cttctgctggagaggatgaacaagtttgacggcccgccccccaactacatcaacacttac
cccaccgacctcagcgcaggagggggcccagccatactccgacacaaggccatgctggag
ccagacaacacacccttcaagacaaagaacactcagtcgtttccagcccgacgtctttgg
cacttcctggtcaaacaggaagttcttcaggagacgttgatccgttacatctttaccaag
aaaaggaagcagtgtgagtctgtagagaaccacatggaccgtataaacccaaactgcata
gcaggagctagcggcccctataaggtggaagcagatctgggctaccccggaggaaaggct
cgaatcattcataaagagtcggatataatcatggcatttgccatcaataagtccaactcc
aacgagatagtgttggcctccactcatgatgtccaggaagtggacgtgtcaacgctggtg
gctgtgcagcccttcacctggataggggacgaatttgataaggagtcccgcagctctgac
gacatggaccatcgctcttctcacaccaacattgcccaggccagctctgcccccttcgca
cccccacagatgcaggtctctgcgtccatgccgtggctcggcagtgggcagaccagcatg
ggggccagcgtgattatgaagaggaatctaaacaacgttaagagaatgacatcccatcct
atatatcagtattacatgacaggggctcaggatggcagtgtgagaatgtttgaatggaac
agacctcaacagctcatttgcttcagacaagcaggcaacgcccgagtcacccgactctat
ttcaactcccagggcaataagtgtggagtcgctgacggagagggcttcctcagtctctgg
caggtcaaccagacatcctccaaccccaaaccctacctgagttggcagtgccacagtaag
acctgtggtgatttcgacttcatcacctcctccagcctcatagccaccgccggacagtcc
aacgataacaggaatgtttgcctgtgggatactctggtttcaccaagcaataccatggtc
cacgcgttcccttgccatgagaacggggccactgtgctgcagtacgctgccaaacagcag
ctgctcatcactggaggcaggaagggctttgtgtgcgtgtttgacatccgccagaggcag
ctgctgcacactttccaggcccatgactccgccatcaaggccctcgcactggacgccttc
gaggacttctttgtcactggctctgcagagggcaacgtgaaggtgtggaagttggccggc
cacgggctcatgcactctttcagcacggagcatgccaagcagtccatcttccgcaacatc
ggcaacggtgtcatgaaggtggaaacgcggcccggcaaccgcatcttcacctgcggagcg
gacggcacgctgaagatgagggtgctgcccgaccgctacaacatccccagcagcttggtg
gacgtcctgtaa
DBGET
integrated database retrieval system
