Gasterosteus aculeatus (three-spined stickleback): 120831487
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Entry
120831487 CDS
T07457
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120831487 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120831487 (nup54)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120831487 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
120831487
NCBI-ProteinID:
XP_040052864
UniProt:
G3PV87
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All DBs
Position
XIV:3961678..3969050
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AA seq
624 aa
AA seq
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MAFSFGGATSNPAASTSGFSFGSFGAKPTASTAAFGFGPAATTTTTAASGFGTLTAPGFG
AAATTAAAPATGFSFGSTNTGFGGLGAGSTTAGGFSFGGLGLNANPAAVSFNVGCFGTAT
TTGTVFNFGNSLASTGTFGGFGTTTTTAAAPGSTFSFAGPANTAGGLFGNTQNKGFGFSS
GLGAGTAAGTTGFGTGLGTTGLGGFGGFNIQPAQQQPGGLFGQQAQLQAQPTLLYQQVTA
LSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNQPVDFSQENPFCRFKAVGYSCVPV
SKDEDGLVVLLFNRKEADVRAQQQPLVESLHKVLGNNQTLTVNVDGVKALPNDQTEVIVY
VVERSPNGTSKRIPATTLFSYLEQANVKVQLTQIGVVMSVARTELSPAQLKQLLQNAPAG
VDPIIWEQAKVDNPDPEKLIPVPMVSFKELFRRLQIQDQMNKQHQTRVDIISSDISDLQK
NQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIHSELNA
PTQFKGRLNELMSQIRMQNHFGAARSEERYSVDADLLREIKQHLKQQQDGLSHLISVIKD
DLEDIKLIEHGLSDSGHMKGGILS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggagccacgagtaacccagctgcaagcacgtccgggttttct
ttcggttcatttggtgccaaacccaccgcatcaacggcagcatttggcttcggccccgca
gccaccaccaccaccacggccgcatccggattcggcactctcacagcccctggtttcggg
gcagccgccactactgctgccgcaccggccacaggatttagttttggctccaccaacact
ggatttggggggctgggagctggaagcaccacggctggtgggtttagttttggggggctt
ggtttaaatgccaacccagcagcagtcagctttaatgtggggtgctttggtacagcaacc
accacgggcactgttttcaattttggtaatagcctggctagcacaggcacgtttggtggc
tttgggacaacaacaacaactgctgctgcaccagggtccacatttagctttgctggtccc
gccaacactgcaggcggcctgtttggtaacacgcagaacaaaggttttgggttctcctct
gggcttggcgctgggaccgctgcagggacaacgggatttggaactggattaggaacaact
ggcctcggtgggtttggaggctttaatatccagccagctcagcagcagccagggggcttg
tttggccagcaggcccagctacaggctcagcccaccctactttaccagcaggtcactgct
ctttcagctcccaccttgttgggagatgagcgtgactccattttagccaagtggaaccag
ttgcaggcctactggggcactgggaagggctactacagcaacaacaaccaacccgtggac
ttcagccaagagaaccctttctgcaggttcaaggcggtgggctacagctgcgtcccagtg
agtaaggatgaggatggtttagtggtcttgctttttaatagaaaggaagctgatgtgcga
gctcagcagcagccactggtggagtccctccacaaggtcctgggaaacaaccagaccctc
actgtcaatgtggacggtgtcaaagctctgccaaatgaccagaccgaggtgattgtttac
gtggtggagcgttctcccaatggcacctccaagcgcatcccggccaccacactgttcagc
tatctggagcaggccaacgtcaaagtccagctcacgcagattggagtggtcatgtccgtg
gcacgcacagagctgtctccggctcaactcaagcagctgcttcaaaacgcgcctgcaggt
gtggaccccattatttgggagcaggctaaggtggacaaccctgacccagagaagttaata
ccagtgcccatggtgagttttaaggagctttttcgtaggctgcaaatccaggatcagatg
aacaaacagcaccagaccagagtggacattatatccagtgacatcagtgacctccagaag
aaccaggcgaccacggtggccaaaatagcccagtacaagaggaagctgatggatctctct
cacagggtgctgcaggtgctaatcaaacaggaaattcagaggaaaagtgggtatgctatc
caagtggacgaggagcacctgagggtgcagctggacaccattcactctgaactaaatgcc
cccacacagttcaagggtcgtttgaatgaattaatgtcccaaatccggatgcagaatcac
tttggagctgcgagatcagaagagcgctatagtgttgatgcagacctactcagggaaatc
aaacaacacttgaaacagcagcaggacggtttaagtcatttgatcagcgtcatcaaagac
gacttggaagacatcaaactcatagagcacgggctgagtgacagtggacacatgaaagga
ggcatcctgagctga
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