Gasterosteus aculeatus (three-spined stickleback): 120831493
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Entry
120831493 CDS
T07457
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04010
MAPK signaling pathway
gat04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120831493 (cacna1bb)
04020 Calcium signaling pathway
120831493 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120831493 (cacna1bb)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120831493 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
120831493
NCBI-ProteinID:
XP_040052878
LinkDB
All DBs
Position
XIV:11237623..11363424
Genome browser
AA seq
2397 aa
AA seq
DB search
MPRFAEDLPTRYGGNAGGGGRGGPGAGRGGARGGGAPGGQRVYKQSMAQRARTMAIYNPN
PVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASD
KTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILATV
GSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGV
EFYMGKFHTTCFKNETGEQAAHWPCGLEPPARLCPDGTQCREYWTGPNFGITNFDNILFA
VLTVFQCITMEGWVDILYSTNDVAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKER
ERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAWYKRKQN
LPVLKRGKVKKGKNDLISAEEGEDPFADISSVPPPGSPFGRASMKSGGKMDSSSYFRRKE
KRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPDWLTTALYTAEIVFLGLFLTE
MSLKMYGLGARNYFHSSFNCFDFGVIVGSICEVIWDMIKPGASFGISVLRALRLLRIFKV
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEEQEEAANKKLALQKALEVKEVSPISAANISITAFVKQNRDALSRR
SSINSIQSHKEQQRSAKAMSVWEQRTNQLRRHNIRTSSEALFNELDPEERLQKSSTLHLH
PDTKTHLDRPLVVEAKNGDKPSRPPEGPWEESGNPRQDGVGDNFHSHSRKHHRHRDRNGE
RGDGGEARGGRHHTHHSRSRDHNGDGAQVRDSRGESGNGRDGGQGHRHHRQAGSPEEEAK
DCRSGGEERGHRHHHFHRAPKEGNGLMANGAQGERRGRGGGGGGGGDSNGERKGRGSRMV
RAQSTLEGDDCKRNKNGTKGHRDRQPDSEEDGLASSPPQPMRSGLSPGEKQEDADNQKNS
TRASQAGLNSNAIIIPVTVTCPPRETTIIPVNNLDCDNFGLSEEKKDLEEEEEDAANGPR
QMLPYSSMFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSIALAAEDPVQANAPRNNV
ISDYVFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFACSSLMGSHQ
SVSRGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFM
FIFAVIAVQLFKGKFFYCTDESKALEKDCRGQFLDYHKDDVAAQPREWKKYEFHYDNVLW
AFLTLFTVSTGEGWPLVLKHSVDATYEDKGPSPGFRMETSIFYVVYFVVFPFFFVNIFVA
LIIITFQEQGDKAMSECSLEKNERACIDFAINARPLTRYMPENKQSFQYRMWKFVVSPPF
EYAIMTLIALNTVVLMMKFYGAPDLYESMLKYLNIVFTALFTLECILKIIAFGPLNYLKA
AWNVFDFVTVLGSITDILVTEIKTDKMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQ
SFKALPYVCLLIAMLFFIYAIIGMQVFGNIDLNEETAINLHNNFQTFFQALTLLFRSATG
EAWHEIMLACLSNRPCDVHSGTVGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFE
YLTRDASILGPHHLDEFIRVWAEYDPAACGRICYQDMYKLLRFISPPLGLGKKCPNRVAY
KRLVRMNMPIAEDRTVHFTSTLMALIRTALDIKLASGVLAQHLCDADLKREIHRVWPSLS
QKTVDLLVTPPKYNELTVGKVYAALMIFDHYKQTCAKRLQQQHSGGQQSKLGSLFRPMLP
LTHIQEVEPPICSPKLPLSPQPEPEAKPELLPTTSLTSVNRDSLLNQRSAIKHSQSGDVS
QAAQQRPKARRKLQRGQSEDVPYSTKPQEFVELKQVENLSDSEEYPSLEGHSRAASLPRL
NAEYYRSHPRHVPGTHLAPIVDLSPIRRSASSLTPQRYQEVGLSEYDLERPGLAQAEGQD
RAHHHHHHHRCHRRRDKDKDKKQTSMDRAESMQPSSTVDSFTDPSAEGLSRERARERDRG
RPHERRHHSSAGEKQRYYSCERYGSREQCHTKSAGPSRSTSPGEGQDAVFVKQHGSSVVL
AGPGTLPSGSSTPGRGRRQLPQTPLTPRPAVSYKTANSSPLQPGAGAAAATGHHTRCSRG
LSEHDRLHWGTDESPIPVTRIGSDPNLNRQSQVASQEALLEEDFQDTVSSHGRGRSARTA
ASTTASTSHAAAASAAAQGRAGAVPNGFHFTLGVNSASGPGGRGTGSLREREEEDWC
NT seq
7194 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcttcgccgaagatctccccacccgctatggaggaaacgccggcggcggtggg
agaggcggaccgggcgccggcagagggggagcccggggtggcggcgcaccgggcggccag
agggtgtacaagcagtcgatggcccagagagcccggacaatggccatctacaacccgaac
cctgtcaaacaaaactgcctcacggtcaaccgctccctcttcatcttccgcgaggacaac
ctcatcaggaagtacgcaaagcggataacggagtggcctccattcgagtacatgatcctc
gcaacaattatcgctaactgcatcgtcttggccctggagcagcatctgcccgccagcgac
aagacacccatgtcggaacgcctggacgacacagagccctactttattggaatattctgt
ttcgaggcagccattaagatcatcgccctgggctttgcttttcacaaaggctcctacctc
cgcaacggctggaatgtaatggacttcgtggtcgtcctcacaggaatcctggccacggtg
ggttcagactttgatctgcgaacactgcgagcagtgagagtgctgcggcccctgaaactt
gtgtcaggaatccccagtctccaggtggtactgaaatccataatgaaagccatggttcct
ctgctccagatcggcctgctgcttttcttcgccatcgtgatgtttgccatcatcggggtg
gagttctacatgggcaaattccacaccacctgcttcaagaacgagaccggtgagcaagca
gcacactggccttgtggtctggagcctccggcgaggttgtgtcccgacgggacccagtgc
agagagtactggaccggacccaactttggcatcaccaactttgacaacatcctgtttgcc
gtgcttaccgtgttccagtgcatcaccatggagggatgggtggacatcctctacagcacc
aatgatgtagcaggaaacacttggaactggctgtacttcatccctctcatcatcatcggc
tccttcttcatgctcaacctggtgctcggtgtcctctccggagaatttgccaaagaaaga
gagcgtgtggagaagaggcaggagttcctgaagctccggaggcagcaacagatcgagcga
gagctcaccgggtacttggagtggatctgcaaagcagaggaggtgttgctggaggaggag
gatgagattgcagaggagaagtccccgctggacggtgcgtggtacaagaggaaacagaac
cttccagtcctgaaacgaggcaaagtgaagaaaggtaaaaacgacctgatcagcgctgag
gagggagaggatccttttgcagacatctcctccgttcctccccctggctcgccgtttggt
cgggctagcatgaagagcggcgggaagatggatagctcctcttacttccggcgtaaggag
aaaaggacgcgtttcttcatccgccgcatggtgaaagctcagagcttctactggatcgtt
ctgtgcctggtgggcctcaacactctttgtgtggccatagtccactacgaccagcccgat
tggctcacaacagccctctacacggccgagattgtgttcctgggtttgtttctgactgag
atgtcgctgaagatgtacggcctcggagcgaggaattatttccactcgtcctttaactgc
tttgattttggcgtgattgtgggaagcatttgtgaggtgatctgggacatgattaaacca
ggggcatcatttggaatcagcgtactgagagctctgcgactgctccggatattcaaggtc
accaaatattggaactcgttaaggaaccttgtggtgtccctcctgaattccatgaagtcc
attatcagcttgctcttccttctcttcctcttcatcgtggtctttgccctgctgggcatg
cagctctttggaggacagtttaactttgaagatgagacgccaacaacaaactttgatacc
ttcccagcagcgatcctcactgtgttccagattcttactggcgaggactggaacgccgtg
atgtaccatgggatcgagtctcaaggtggcgttcgtcggggcatgttctcctccgtctac
ttcatcgtcctcacgctcttcgggaactacaccctcctgaatgtcttcttggctatcgct
gtcgataacctcgctaatgcacaggagctgactaaggatgaagaggagcaggaggaggcc
gccaataagaagcttgccctgcagaaagctttggaggtgaaagaagtcagtccgatatct
gctgccaacatctcaatcacggcttttgtaaagcaaaatcgagatgcactctctcgcagg
tcgtccatcaacagcattcagtcacataaagagcagcagcgctcggcaaaggccatgtca
gtgtgggagcagaggaccaaccagctgaggagacacaacataaggacaagcagcgaggct
ttgttcaacgagctcgacccggaggaacgcctccagaagtcctccaccctccatctgcac
ccggacacgaagactcacctggaccggccgctcgtggtggaggccaagaacggcgacaag
cccagcaggcctcccgaagggccgtgggaggaatcgggcaatccccggcaggacggggtg
ggggacaacttccactcgcactccaggaagcaccaccggcaccgcgacaggaacggggag
agaggggatggaggcgaagcccggggcgggaggcaccacacccatcacagccgcagcaga
gaccacaacggcgacggtgcccaggtgagggacagtagaggggagagcggcaacggccgc
gacggaggccagggacaccggcaccaccggcaggccggctcccccgaggaggaggccaag
gactgtcggtcagggggagaagagaggggccaccgtcaccatcacttccatcgtgcacca
aaagagggaaacgggctgatggccaatggtgcgcagggagaacgcagggggaggggtgga
ggtggaggaggagggggggacagtaatggggagagaaagggccgcggctctcgtatggtc
cgagctcagtccactctggaaggagacgactgtaagaggaacaagaatggaaccaaaggt
cacagggacaggcagccggactctgaggaggacggcctcgcctccagccctccgcagccg
atgcggagtggcctgagtcctggagaaaagcaagaggatgccgacaaccagaagaactcc
accagggccagccaggcgggcctcaacagcaacgccatcatcatccctgtcaccgtcact
tgcccgcccagagagaccaccatcatacccgtgaacaaccttgattgcgataactttgga
ctcagtgaggagaagaaagacctggaggaggaggaggaggacgcagctaatgggcctcgg
cagatgcttccctacagctccatgttcatcttcgggcaaacaaaccctgtgcgtcggctg
tgtcactacgtggtcaacctacgctactttgaaatgtgcatcctgatggtcatcaccatg
agcagcatcgccctggcagccgaggacccagtgcaagctaacgcgccgcgcaacaacgtg
atatctgactatgtctttactggggtcttcacctttgagatggtgattaagatgattgac
ttgggactgctcctccatcctggcgcttacttccgtgacctgtggaacattctggacttc
attgtggtcagcggagccctggtggcctttgcctgctcgagccttatgggatcgcatcaa
agcgtgtccagagggacgaagggcaaggacatcaacaccatcaagtccctgagggtcctc
cgagtcctgcggccactcaagaccattaaacggcttcccaagctgaaggcggtgttcgac
tgtgtcgtgaactctctgaagaacgttctgaacatcctcatcgtctacatgctcttcatg
ttcatcttcgctgttatcgctgttcagctcttcaagggcaaattcttctactgcaccgac
gagtccaaagctctggagaaagactgcaggggtcagtttctggactaccacaaggacgac
gtggcagctcaaccaagagagtggaagaagtacgagttccactacgacaatgtcctctgg
gccttcctcacgctcttcacggtgtccaccggggagggctggccgctggtcctgaagcac
tcagtcgacgccacttacgaggacaagggccccagcccgggcttccgcatggagacatcc
atcttctacgtggtctacttcgtggtgttccccttcttcttcgtcaacatatttgtggct
ttgatcatcatcaccttccaggagcagggagacaaggccatgtcggagtgcagcctggag
aaaaatgagagggcttgtattgactttgccatcaacgccaggccgctgacgagatacatg
ccggagaacaagcagtccttccagtaccggatgtggaagtttgtggtgtcgcccccattt
gagtacgccatcatgactttaatcgccctcaacaccgtggtgctgatgatgaagttctac
ggagctccagacctgtacgagtccatgctgaaatacctgaacatcgtcttcacagccctc
ttcacactggagtgcatccttaagattattgccttcggtccactgaattacctgaaagca
gcctggaatgtgtttgactttgtgactgtgctcggaagcatcacagacatcttggtcacg
gagattaagacggacaagatgatcaacctgagcttcctgcgactgttcagagcggctcgt
ctcatcaagctgctgcggcagggctacaccatccgcatcctgctgtggaccttcgtgcag
tccttcaaggccctgccgtatgtctgcctgctcattgccatgctgttcttcatctacgcc
atcatcggaatgcaggtgtttggaaacatcgacctgaatgaggagacggcaataaatctc
cacaacaacttccagacgtttttccaagccttgactcttctcttcaggagtgcgacaggc
gaggcgtggcatgagatcatgttagcgtgtctcagcaaccggccgtgtgatgttcactcg
ggaaccgtggggaaggagtgcgggagtgactttgcttacttctactttgtctcgttcatc
ttcctctgctccttcctgatgttgaacctcttcgtcgccgtcattatggacaactttgag
tatctgacgagagacgcctccatcctgggaccgcatcaccttgacgaattcatccgtgtg
tgggccgagtacgaccctgcagcctgcgggaggatttgctatcaggatatgtacaaattg
ttgcgttttatctcgcctcccttgggcctgggcaagaagtgccccaacagggtggcgtat
aagcgactggtgaggatgaacatgcccattgcggaagacaggacggtgcattttacctcc
acgctgatggccttgatccgcaccgccctggacatcaaactggcatctggcgtcctggcg
cagcatctgtgcgacgctgacctgaagagggagatccaccgagtctggcccagcctgtcg
cagaagactgtcgacctgctggtgacgccgcctaaatacaatgagctgactgtggggaaa
gtctatgcagctctaatgatctttgaccactacaagcagacttgtgccaagcgactccag
cagcagcattcggggggacaacagagtaaactggggtcgttgttccgtccgatgctgccc
ctcactcacatacaggaagtcgagccaccaatctgcagccccaaactgcccctctcacct
cagcctgagcccgaagccaagcctgaattactgcccactaccagcctcacctcggtcaac
agggattcactgctaaaccagagaagtgccatcaaacattcccagtctggtgacgtctct
caggctgcacaacagaggcccaaagcccggaggaaactacagagaggccagtcagaggac
gtgccgtattccaccaaacctcaggagtttgttgaattgaagcaggtggagaacctatca
gactcagaggaatatccgagcctggaaggccacagcagagcggcttctctgccccgactc
aacgccgagtactaccggagccaccctcgccacgtccctgggacccacctggcaccgatc
gttgacctcagtcccatccgacgctcggcatcctcgctgacgccgcagcgctaccaggag
gtcggcctgtcggagtacgacctggaacggcccggcttggcccaggctgagggccaggac
agagcccaccaccatcaccaccaccaccgctgccacagacggagggacaaggacaaagac
aagaagcagacgtccatggaccgagctgagtcaatgcagccgtccagcaccgttgactcg
ttcaccgacccttcggccgaaggcctgtccagagagcgggcgagggagcgggaccgcggc
cggcctcacgagcggaggcaccactcctcagcgggggagaagcagcgctactactcctgc
gagcgctacggcagcagggagcagtgtcacaccaagtccgcggggcccagccgctccacg
tctcccggcgagggacaggacgccgttttcgtcaaacagcatggcagcagcgtggtccta
gccggccctggaacgctcccctctggttccagcacgccgggccgcggacgcaggcagctt
ccacagacgcccctcaccccccgtcccgccgtgtcctacaagaccgccaactcctcgccg
ctccagcccggtgccggtgccgccgccgcgacggggcaccacactcgctgcagccgtggc
ctttcagagcacgatcgcctacactggggcaccgacgagtccccaataccggtcacccgc
atcggttcggaccctaatttgaaccgtcagtcgcaggtggcctctcaagaggccctcctt
gaagaggacttccaggacactgtgagcagccacggaaggggacgctccgccagaaccgct
gcctccaccacggcatcaacttcccacgcagccgccgcttcggccgccgcgcaggggaga
gcgggcgccgtccccaacgggttccacttcaccctcggggtcaactctgcgtccgggcct
gggggccgaggaacaggaagtctcagggagagggaggaggaggactggtgctaa
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integrated database retrieval system
