Gasterosteus aculeatus (three-spined stickleback): 120831509
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Entry
120831509 CDS
T07457
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120831509 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120831509 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
120831509
NCBI-ProteinID:
XP_040052915
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Position
XIV:3285226..3316256
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AA seq
1205 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSAEKPANKKV
SRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPAPPAIAAESSASSEKPSIDREQEVSKKTAPAAAPAVAATDVPDEDVAPP
KPPLPEAKMAELRAQLSADAGQRRPSQKENPPPALPPKKRQSAPSPTRVAVVAPMSRGSS
LPCSVHRQQQDYEQEFLQRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQ
CSRNTSCETLDNTETYDPDYDFLHQDLSAGENLPPIPVGGCLSPLPESHSESSSPVPGQH
PSHPRFSAPPSQQQQQPEYWTPQPNQPNPLRSCRVSAPPALPQKKRRSTQNSPFPDAGSR
VLYERYPSQYDNMSEEELHPTPPFPLFTPISPMPQTNGGVFVAHYIAGEHADVPSSPPPL
PEKKSRHILQYMQFVEDYSEPQPSMFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVH
EPVLPPALPPKQRQLASHSSSPSSSSSSSLSCHLQPSVAAMEEAGSALGLSMSVSNSYLI
GQASLITPTSLDQVALTNATVLDGGGDGPSGSLAGSLGSVAVCLPSESPLTDSLHASASE
CANDEAGEGEYVNLYSSSRANGELPLSLRETITADDVLQDPAPQMPSTNSKEALDKDRRQ
KTTESAGSDEEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDL
VLYCEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLV
ELTEDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQRKLLRYTNSLKPLAARGVSAR
PGTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYW
VRSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSE
GLEEYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKR
WQQFNILDSMRRFQQVHYDLKRNEDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRKTD
REEKT
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagcaagcaagactcgcagcggtcccacttgtcctctttcacc
atgaaactgatggacaagttccactctcccaagatcaagaggactccatccaagaagggc
aagcagctgcagccggagccagccgccaagagcgccgaaaaacccgcaaacaagaaggtc
agccggctggaggagcacgagaaggaggtggtcagcgccctgcgctacttcaagaccatc
gtggacaaaatggtcgtggagaagaaggtgcttgagatgcttcccggctcggccagcaag
gtgctggaagccatcctgcctctggttcaggtggaggcgcggatacagcacagttcggcg
ctctcttcctgccataaccgggtgtaccagagcctggccaacctcatccgttgggcggac
caggtgatgctggatggcatcgacctggaggacaaggagaacgtggcgtccgtcaccagc
gtcatcaaagccgtcctggatggagtcaaggaattggtgaagctgaccatagagaagcag
gagcagccgtcacccaccaccccgaacaaaccggcaccacctgccatcgcggcggagagc
agcgcgtcgtcggagaagccctcgatcgatcgggagcaggaggtctcgaaaaagacggct
ccggcagcggctcccgcagtggctgccacggacgtgccagatgaggacgtggcccctccc
aaacccccccttccagaagccaaaatggcagagctcagagcacagttgagtgctgacgct
ggccaaaggagaccctctcagaaggagaaccctccgccagctctcccccctaagaagcgc
cagtcggccccttcgccgacgcgggtcgccgtggtcgccccgatgagccgcggctccagc
ctgccttgcagcgtccacagacagcagcaggactatgagcaggagttcctccagaggcgt
ttctctggagggagccagtcctacgggggggattccccgcgcctctctccgtgcagcagc
atggggaaacttagtaagtctgacgaacagctctcgtccatggagcaggacagcggtcag
tgttctcgtaacaccagctgtgagacgctagacaacacggagacttacgacccggattac
gacttcctccaccaggacttgtcagctggggaaaacctcccccccatccccgtgggaggg
tgcctgagccccctgcccgagtcgcacagcgagtcctcctccccggtccccggacagcat
ccctcgcatccccgcttcagtgcccccccctcgcagcagcagcagcagccagaatactgg
accccgcagcccaatcaacccaaccccttacgctcctgccgcgtcagcgcgccccccgcc
ctcccccagaagaagcggcgcagcacccagaactcgccgttccccgacgcgggctccagg
gtgctgtacgagcgctacccctcccaatatgacaacatgtcggaagaggagctgcacccc
acgccgccattcccccttttcacgcccatctcccccatgccccagaccaacgggggcgtg
ttcgtcgcccactacatcgccggcgagcatgcggacgtccccagcagcccgcctccgctg
ccggaaaagaaaagcagacacattctccagtacatgcagtttgtggaagactactcggag
ccgcagccctccatgttctaccagatgccgcagagcgagagcatctacgagcagcgcaac
aagcgcttccaggaggtctacggcttcaacgactccttcagcagcaccgactcggtccac
gagccggtgctgcccccggcgttgcccccgaaacaaaggcagctggcctcccactcttcc
tccccctcttcctcctcctcctcttccctctcctgccacctccagccgtctgtagcggcc
atggaggaggcgggctctgcgctgggcctcagcatgtccgtttctaactcctacctgatt
ggccaagcttctttgatcacacccacgagcttggaccaggttgcgttgaccaacgccacc
gtcctggatggcggtggggacgggcccagcggttccctggccggctcgctgggctccgtg
gccgtctgtcttccttccgagtcgcctctcactgactcgctccacgcctcagcgagcgag
tgcgcaaacgacgaggccggggagggggagtacgtcaacttgtactcgtccagccgggcc
aacggggagctgcctctctccctccgagaaacgatcacagcggacgatgtacttcaagac
cccgcccctcaaatgccgtccaccaatagcaaagaggctttggacaaggataggaggcag
aagacaacagagtcggcagggagcgacgaggaagacgtggacgagctctccctcatagac
cacaaggagatcatgagcaggataacactgaaacaggaaaacgacgacggccccgacgtc
cgtgcgggatcaggagacattctgttagtccacgcgacagaaacggaccgcaaagatctc
gttttgtactgtgaagcctttctgacgacttataggacttttataacccccgaggacctc
attaagaagctacactacagatacaccaggttctgccacagtccggacaccttcaagaag
cgcgtcagcaagaacactttctttgtgctggttcgtgtggtggatgagctgtgcctggtg
gagctgacggaggacatcttgaaacagctgatggacctggtgttcacgctggtgtgcaac
ggcgagctcagcctcgcccgcgtgctccgcaagaacatcctggataaggtggagcagagg
aagctgctgcgctacaccaactcgctcaagccgctcgccgcccgaggggtctccgcaagg
cccggcacgctccacgacttccgcagtcacgagattgcggatcagctcactcttctcgat
gccgaactcttctataagatcgagattcccgaggtgctgctctgggccaaggagcagaat
gaggagaagagtcccaacctgactcagttcacggagcactttaacaacatgagctactgg
gtccgctcgttgataattcagcaggagaaagctcaggaccgagagaagctgcttctcaag
ttcataaagataatgaagcacttaagaaagttgaataatttcaactcctacctagcgatt
ctgtccgctctggactcggcccccatccggagattggagtggcagaagcagacgtcagag
ggactggaggaatattgcacgttgattgacagctcctcgtcgttcagagcgtaccgagct
gctctggctgaggtggagcccccgtgcatcccctacctgggtctcattctgcaggacttg
accttcgtccacctggggaaccctgacctcatcgacgggaaggtcaacttctccaaacgc
tggcagcagttcaacattctcgacagcatgcggcgcttccagcaagtgcactatgacctg
aagcgcaacgaggacattgtctgtttcttcaacgacttcagtgaccacctggcggaggag
gccctgtgggagctgtcgctaaagatcaagcccaggaacatcaccaggcgcaagacggac
cgcgaggagaagacctag
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