Gasterosteus aculeatus (three-spined stickleback): 120831584
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Entry
120831584 CDS
T07457
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120831584 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120831584 (exosc2)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120831584 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120831584 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
Thymopoietin
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
120831584
NCBI-ProteinID:
XP_040053047
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All DBs
Position
XIV:complement(6292851..6295957)
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AA seq
293 aa
AA seq
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MAADMRLPTVLKSVSLSGSVLDRKDLVVPGDVITSDTGFMRGHGTYVDDDKLTASVAGEV
QRVDKLICVRPLQTRFNGEVGDVVVGRITEVQQKRWKVETKSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFSDGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASMILGNNGFVWLYPTPEQLDEGAGGFYTNLQPVGLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattacccactgttctaaaatcggtgtcgttatcgggttctgtt
ttagacagaaaagatctggtcgtcccgggcgatgtcatcacctcagacaccggtttcatg
aggggtcacggcacctacgtggatgatgacaagctgacggcttcggttgctggagaggtg
cagagagtagacaagctgatctgcgtcagaccacttcagaccaggttcaacggtgaggtt
ggagacgtggtggtcggcagaatcacggaggtacaacagaaaaggtggaaggtggagacc
aaatcccggctggactctgtcctcttgttgtcctctgtcaatctgcctggaggagagctg
aggagaagatcagcagaagatgagctcaccatgagagaataccttcaggaaggcgatctc
atcagtgcggaggtgcagtcggtcttctcagatggagccttatccctgcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtacagctctctccttctctaataaag
aggcaaaaaacccatttccacaacctgccatgtggtgcatccatgatcctcggcaataac
ggctttgtgtggctgtatcccacacctgaacaactggacgagggtgccgggggattctac
accaacctgcagcccgttggtctgtcagatcgagaggtgatttcacggttgagaaactgc
ctactggctttggccgcacacaaggtgcttctgtatgacaccagtgttctctattgctat
gagtcgtcagttcaacatcaggtcaaggacatcttgaaaccagaagtgatggaggagatt
gtgatgttgacgcaacagaagctgttggaacaggaaggttaa
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integrated database retrieval system
