Gasterosteus aculeatus (three-spined stickleback): 120831586
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Entry
120831586 CDS
T07457
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831586 (vldlr)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120831586 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
120831586
NCBI-ProteinID:
XP_040053050
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Position
14:complement(10625102..10655967)
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AA seq
864 aa
AA seq
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MITSAPGILLLPMLICLQRCIDVHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCTDGSD
EDSCVGKTCDEVDFVCHNGQCVPKRWHCDGEPDCEDGSDESVEICHMRTCRVNEFSCGAG
STQCIPVFWKCDGEKDCDNGEDEVNCGNVTCAPNEFTCASGRCISSNFVCNGEDDCGDGS
DEVACAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSE
MQCGSGECIHKKWRCDGDPDCKDGSDEANCPVRSCGADQFRCDDANCILGSKQCNGLRDC
ADGSDEVNCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNHNECLLN
NGGCSHICKDMAIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFNQQMI
FWADLGQRAVYSTVLDKRGDVGTHNKVIDNVQTPVGIAVDWIYKNVYWSDLGTKTISVAN
FNGTKQKLLFSKGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRNKVLQSPEYLAHPFALTVFEDRVFWTD
GENKAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLP
APQINKHSPKYTCVCPEGQELAADGHRCRPEHSTKGPSKDDGKALTHPPPESNVGTSIQV
DSTARGSAAAWAILPVLLLAMAAGGGYLMWRNWQLRNQKSMNFDNPVYLKTTEEDLNIDI
TRHGANVGHTYPAISIVSTEDDLS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtccgcgcccgggatcctgctgctgccgatgctaatatgtctgcagcgctgc
attgacgtccacggtacaaagaccgaatgtgaggccagccagtttcagtgtggaaacggt
cgctgcatcccctccgtgtggcagtgtgacggagacgaggactgcaccgatggcagcgac
gaggactcctgtgttggaaaaacgtgcgacgaggtggactttgtgtgtcacaacggccaa
tgtgtccccaagcgatggcactgcgacggggagccagactgcgaggacgggtcagacgag
agcgtagaaatctgccacatgaggacgtgtcgtgtgaacgagttcagctgcggcgccggc
tccactcagtgcatccctgtcttctggaaatgtgacggcgagaaggactgtgacaacggc
gaggacgaggtcaactgtggcaacgtcacctgtgctccaaacgagttcacgtgcgccagc
gggcgctgcatctccagtaactttgtgtgcaacggtgaggacgactgcggcgacggctcg
gacgaggtggcgtgcgcgccgtcctcctgcggccccagtgagttccagtgtggaaactcc
tcttgcatcccggccagctgggtgtgtgacgacgacgtcgactgccaggaccagtctgat
gagtctccgtctcgttgcggccgccacccgacgccaccggccaagtgttcgtccagtgag
atgcagtgcggctcaggggagtgtattcacaagaagtggcggtgtgatggagaccctgac
tgcaaggacgggagcgacgaagccaactgccccgtacgcagttgtggagcggatcaattc
cgatgtgatgatgccaactgcatcctgggcagcaaacagtgtaacggcctccgagactgc
gccgatggatcagacgaagtcaactgcaaaaacatgacccagtgtaacggaccagagaag
ttcaagtgtcgcagcggggagtgtatcgagatgagcaaagtgtgcaacaaggcccgagac
tgtcccgactggagcgacgaacccatcaaggaatgcaatcacaacgagtgtctcctgaac
aacggcggctgctctcacatctgcaaagacatggcgattggttttgagtgtgactgcaca
cctggacttcagctcattgaccacaagacctgcggcgacatcaatgagtgtctgaatccc
ggcatctgcagtcagatctgcatcaacctgaagggcggatacaagtgcgaatgtcacaac
ggctaccagatggatccgacaaccggcgtctgcaaagctgtcgggaaggaaccctgcctg
atcttcacaaaccgcagagacatccgccgcctgggtctggagaggaaggagtacactcag
attgtggagcagcagaggaacaccgtggctctggatgcagacttcaatcagcagatgatc
ttctgggccgacctgggccagagggccgtatatagcactgtgctggacaaacgcggggac
gtcggcacccacaataaagtgattgacaacgtccagactcccgttggcatcgccgtcgac
tggatctataaaaacgtctactggtctgatctcggcaccaaaactatttctgtagccaac
ttcaacggaaccaagcagaaacttctgttcagcaaaggcctcaaagagccggcatcgata
gctgtggatccgctgtcggggtttctatactggtccgactggggcgagcctgctaagatt
gaaaaatctggtatgaacggagtggacagacaggttctggtggcgactgacatccagtgg
cccaatggcatcaccctggatctgatcaaaggccggttgtactgggtcgactcaaagctt
cacatgctctgtagcgtcgacctgaacggagacaacaggaacaaagtactgcagtctcca
gaatacctggcgcatcccttcgctctcactgtgtttgaggatcgagtcttctggacagat
ggtgaaaataaagccatttacggcgcaaacaagttcacaggctctgacgtggtgacgctg
gccagcaacctgaatgacccccaggacatcatcgtgtaccacgagctgatccagctctcg
ggcacgaactggtgtgccgagaagggtgaaaacggaggctgtagctacatgtgtctgcct
gcaccgcaaatcaacaaacactcccccaaatacacctgtgtgtgtccagaaggtcaggag
ctggctgctgacggccaccgctgcagacccgaacattctaccaaaggtccctcaaaggat
gatgggaaagctctgacgcacccccctccagagtccaacgtgggcacgtcgatccaggtg
gactccacagccagagggtctgctgctgcctgggccatactgcccgtcttgctgctggcg
atggcggcgggcggcggctacctgatgtggaggaactggcagctgaggaaccagaagagc
atgaactttgacaacccagtctacctgaaaaccacagaagaagacctcaacattgacatc
acccggcacggcgccaacgtgggtcacacctaccctgcgatctcgatagtgagcacagag
gacgatttatcatga
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