Gasterosteus aculeatus (three-spined stickleback): 120831587
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Entry
120831587 CDS
T07457
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120831587 (pum3)
03009 Ribosome biogenesis [BR:
gat03009
]
120831587 (pum3)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120831587 (pum3)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120831587 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
Msl2-3_C
Endonuc_BglI
COMP
Motif
Other DBs
NCBI-GeneID:
120831587
NCBI-ProteinID:
XP_040053052
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All DBs
Position
XIV:10609896..10618676
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AA seq
655 aa
AA seq
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MPEMMEAKSKKIYSPKEGKKFPQKGKDSMGTKLGGKPGGKKPYKPFNNTERKGRPKGGDG
GKREHKFPFSKADGGPQKRKMPFKAKNKEDGEGPVFKKMKKGEFDPKKKEMTEEELKKNR
LQIKRDLKNTRQEAEKKDMFQIVRQCKQVWGDLRRKKCDNDLKKKLMTELHELVRGKIKE
MAFAHDSVRVLQCFIQFGSHEQRQEVFEEVKDDVINLCKSKYGKHVVKKLLMYGNKELVG
LVMLTFKGHVRQMLRHAVASSVIEYAYNDKAVLAQRLMLTEGLYGNTFTVCRSSVCNTIE
KVAEANPDKLKNIIDDMKQILTPMAQKEQVIKHSLVHKVFLDYFQFAPDKPRAEMIESIR
ESVVYMAHTHDGARVAMHCFWHGTAKDRKVIIKTMKTYMLKFATGEFGHLVLLAMFDCVD
DTKLVKQAVLSEILASLDEVIGNKYGKKVLLYLLSPRDPAHLLPEIIKVLQQGDGNAHSK
KDMKVRRKELLEVVSPPLLEHLRDNAATMVTDKASSVPISDILASACGDLRPAMTAVAQL
ANHELAPGGVDGQLHMAEHPAGHLVLKWLIEQDMTLAEAGKEERFSRILLDTVGTDILKT
WVRVNRGAMVLCSMLNSYDKSVAAEVKAALASIKSELSSISNNKGAEILLENLNK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatgatggaggctaaatccaaaaaaatctattctcctaaagagggaaagaag
tttccacagaaaggcaaagactccatggggaccaaactgggtggcaagccgggtggtaag
aagccctacaaaccctttaacaacacggagagaaagggcagaccaaagggcggagacggc
ggcaagagagaacacaaatttcctttctccaaagctgacggggggccacagaagaggaaa
atgccatttaaagccaaaaataaagaagacggtgaaggtccggtgttcaaaaagatgaag
aaaggcgagtttgatccaaagaagaaggagatgactgaggaggagctcaagaagaacagg
ctacagattaagagggatctgaagaataccagacaggaggcggagaagaaggacatgttc
cagattgtccgtcagtgcaaacaagtgtggggggacctcaggaggaagaagtgcgacaac
gatttaaagaaaaaactgatgactgagcttcacgagctggtccgcgggaagatcaaagag
atggcgtttgctcacgactctgtgcgagtgctgcagtgtttcatccagttcggcagccac
gagcagagacaggaggtgtttgaggaggtcaaagatgatgtcatcaatttgtgtaagtca
aagtacggcaaacacgtggtgaaaaagctgctgatgtacgggaacaaggagctggtgggg
cttgtgatgctaacattcaaaggtcacgtgcggcagatgcttcgccacgccgtggcctcg
tccgtcatcgagtacgcctacaacgacaaagccgtcctcgcgcagagactcatgctcacc
gaggggctgtacgggaacaccttcaccgtctgcaggtcttctgtatgcaacaccatcgag
aaagtcgcagaggcgaacccggacaagctgaaaaacatcatcgacgacatgaagcagatc
ctcacgcccatggctcagaaagaacaagtgatcaaacattcactggtccacaaagtcttc
ctggattacttccagtttgcacccgacaaaccgagagcggaaatgattgagtctatcaga
gagtctgtcgtctacatggctcacacacacgatggagcacgagtggcaatgcactgtttc
tggcacgggacagccaaggacagaaaagtcatcattaaaactatgaagacttacatgttg
aaatttgccacgggcgaattcggtcacctggttcttctcgccatgttcgactgcgtggac
gacaccaagcttgtcaagcaggccgtgctctcagagatcctggcgtctctggatgaggta
attggtaataaatatggtaagaaggttttgctgtacttgctgagtcccagagaccccgcc
cacctgctgcccgagatcatcaaggtgctgcagcaaggagacggaaacgcccacagtaaa
aaagacatgaaagttcggaggaaggagctgctggaagtcgtctcccccccgctgctggag
catctccgggacaatgctgcgaccatggtgacggacaaggcgtccagcgtccccattagt
gacatcctggcgtcggcctgcggcgacctgcggcccgccatgacggccgtagctcagctg
gccaatcacgagttggcaccaggaggggtcgatggacagcttcacatggcggagcatccg
gctggacacctggtgctgaaatggctcatagagcaggacatgactctggctgaggccggc
aaggaagagcggttcagcaggatcttgttggacacagtgggaaccgacattctgaagacc
tgggtcagagtcaatagaggagccatggtgctctgtagcatgctgaacagctacgacaag
tctgtggccgcagaagtgaaggcggcgttggcgtccatcaaatcggaactgagcagcatc
agcaacaacaaaggagctgaaattctgctggagaatctgaacaagtag
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