Gasterosteus aculeatus (three-spined stickleback): 120831716
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Entry
120831716 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: BRCA1-associated protein
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120831716
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120831716
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120831716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
PTRF_SDPR
zf-RING_11
zf-RING_UBOX
RRM_1
zf-C3HC4_3
zf-ANAPC11
Crescentin
zf_RING_Vps8_fungal
CENP-F_leu_zip
CENPH
zf-C3H2C3
KASH_CCD
ATG16
CSTF_C
Nup54
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
120831716
NCBI-ProteinID:
XP_040053339
LinkDB
All DBs
Position
XIV:complement(697711..705458)
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AA seq
593 aa
AA seq
DB search
MSVSMVVIRLELADQSPSPRGFQYSAVEGMSQEDLREKALCVAKHTLSGKTDLERSAVLH
QHIGSRSMGDMVIETFEPGPDKGGGSSEQDGEPPAVVQEGAEASQEGAEATSAAPDSPSK
QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDVRRSAMVCILTVPATMTSHDLMKL
LAPFNDVMEHMKIIRDSTPNQYMVLLKFCTQADADSFYTACNGRQFNSIEDAVCQMVYVE
RAEVIKSEERASLPVMELTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDATC
PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL
TNHRVWDYAGDNYVHRLVASKTDGKMVQYECEGDTCHAEKIDALQLEYSYLLTSQLESQR
IYWENKIVHLEKETTEEINNMKVKFKETLERCDNLERRFGEISKEKQGIEKKCTQLHTRV
VKLSQELKEEQEMNRCLRANQTQLQSQLVEEERKVKETGEHKDGAIAELQEQLRDVMFYL
EAQEQIEHLPPEARSEIQEGQINIGAGPVGTPPAEAPPPTSGRGRRGRGRKRK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtctatggttgttatccgtctggagctagccgaccagtctccttctccacga
ggtttccagtactcagctgttgaaggcatgtcgcaggaggatctgcgggagaaggctctg
tgtgtagccaaacacactctgagtgggaagacggatctggagcgatcagctgtgctgcac
cagcacatcggcagccggtcgatgggggacatggtgatcgaaacctttgagcccggccca
gataaaggaggcggttcctcagagcaggacggagaacctccggctgtagttcaggaagga
gccgaggcctcgcaggaaggagccgaggcgaccagcgcggcgcccgactcgccctccaag
cagctgcccgaccagatctccttcttcagcgggaacccgtctgtggagatcgtccacggc
atcatgcacctctacaagaccaacaaaatgacgtcgctgacggaggacgtgaggcgcagc
gcgatggtttgcatcctgaccgtccccgccaccatgaccagccacgacctcatgaagctc
ctggcgccctttaatgatgtcatggagcacatgaagatcatacgggactccacccccaac
cagtacatggttctgcttaaattctgcacgcaggcagacgcagacagtttctacacggcg
tgtaacggccgccagttcaactccatcgaggacgcggtgtgtcagatggtttacgtggag
cgcgccgaggtcataaagtctgaggagagagccagtctgccggtgatggagctcaccgag
ctgccgaagtgcaccgtgtgtctggagaggatggacgagtcggtcaacggcatcctgacc
accctctgcaaccacagcttccacagccagtgcctccagcggtgggacgacgccacgtgt
cctgtgtgtcgatactgtcaaactccagaaccagtggaggagaacaagtgctttgagtgc
ggcgtgcaggagaacctgtggatctgtctcatctgcggacacatcggctgcggccgctac
gtcagccgtcacgcctacaagcactttgaggagacgcagcacacgtacgccatgcagctc
accaaccaccgggtgtgggactacgccggagataactacgtccatcggctggtggccagc
aagacggacgggaagatggtgcagtacgagtgtgaaggagacacctgccacgccgagaag
atcgacgcgctgcagctggagtactcgtacctgctgaccagtcaactggagtctcagagg
atctactgggagaacaagatcgttcacctggagaaggaaacgactgaggagatcaacaac
atgaaggttaaattcaaggagacgttggagcgctgcgacaacctggagcgacgctttgga
gaaatcagcaaagagaagcagggcatcgagaagaagtgcactcagctacacactcgcgtg
gtgaagctgagccaggagctgaaggaggagcaggagatgaaccgatgcctgagggccaat
cagacgcagctgcagtcccagctggtggaggaggaacgcaaagtgaaggagaccggggag
cacaaggacggggccatcgcggagctgcaggagcagctgagggacgtcatgttctacctg
gaggcgcaggagcagatcgagcaccttcccccggaggcccgcagcgagatccaggaggga
cagattaacatcggggccggccccgtcgggacgccgccggcggaggctccgcctcccacc
tccggcaggggaaggagaggccgcggaaggaagaggaagtaa
DBGET
integrated database retrieval system
