Gasterosteus aculeatus (three-spined stickleback): 120831746
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Entry
120831746 CDS
T07457
Name
(RefSeq) C-myc promoter-binding protein-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120831746
Membrane trafficking [BR:
gat04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
120831746
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
120831746
NCBI-ProteinID:
XP_040053407
UniProt:
A0AAQ4QDK0
LinkDB
All DBs
Position
II:21992942..22032546
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AA seq
1912 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDPSKPLDQEIHFDDVCHKSATPRAPITDVAVVIRSMGEEVP
PGFTCVEETPGGHSADLNNGGLMAPQIFLCYRRGRDKPPLTDLGVLYEWKERLMQGCQLI
QTTASGRPANISGNSSQRVYVTYRRAPESRPHSALAVTDVCVIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNMIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATM
ECWPPTTKYSLPVFSTFVLTGASAEKVYGAAIQFYEPFPEECLSEQQRSQLGLLGPDPQP
PCTTNTTNTTSPTRSVHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHALPIEKHICH
FMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSMLLQNLGPENAVTLLVF
AVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVD
SRYFDLYDPPPDVSCVDLDTSTIFHNEDKRALTWKILPKKACKNLMNVLNLLYQQLVDGQ
QRCDGQLELSVSASSELSCGKSLQALELEIQEAFLRFMAAILKGYRSFLRPITQAPSEKA
TDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKL
YNSERSGDKGGKAEGERAEESRLIETDESQRSEHTVFITPPELPPLPEGAEHPLCYRYDG
FPVLSLDLFDPLEGLRTPTSRLAARHSCPTSPAPMFRRTKQEIKSAQKIARKYSSVPQLW
SKCLLRHCYGLWFICLPAYVQVCHSKVRALRTAYDVLRKMQAKKLQPPDEVCYRVLMQLC
GQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSRTRGGYFLWMKLRNVVLG
VAQFKRALRRHAPITQNPLSDGSDLDAVSQASLEISADAPLARVDPADDRSSTAARGGGC
VVHARRGGWEPGGAPPHPGDQSDLGYNSLSKEEVRRGAPDTKKESDCSSLSESDSTKGSK
DLLPQPDTELHSSFRPRGIVRSSCPYGDASCQTKGSSSADHVAGLLFTSSLEEIGEVRTR
SLLRRHKSALEDVVGGGSAGGGVLGLGMSRGETDPDKIAGHLGADVKILSAATFSERPRS
LALGWAACREGDEEGRDSSDEDRGNADAIFDLEDLDSEKNPTGGRSRSHTKVVERSVKRT
DIRAGYDPLSLLAAESRPDEDEDRYPGGAEVGTPSARGHLAREIELYMNHMGSPLSSRTP
SLDLQDYGGPLLLPPAPPLPPPAGPRRASLPHGSPLRAAGVTRSRTFHPPSPSRPVPRQR
LLSSPSCRSSGNTTPSASPRPSPRRDRADRGSLASPSSSSSSSFALETLLTPSLDVFKTS
VFSAGKGVAEKASRWYSRLSTYTTPTKDAHSDRLSVSSLGFGDPDRSSPLDEEDRGGSVI
SPQRNGPPGPRRRSPRRSGLDSPSSLLPGCVLSPPGFPLTDKSDLGSSHYTSNTSIFNSY
AMELLISSCSRCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDLRGP
GRLFLKGSSSVEEAVTSSCSASTGPDTGASTLSTPCPTTAVFPPSPEGPGSRRTRPSRAQ
GISGPSPAPGAPMARSISAFGPLDEPPRLHRGVPTSGSLPSRLNDTTDPLNMEWRLHHPE
PVTVPYLSPLVLWKELESLLENEGDPVITEADVVDQHPIIYWNLVWYFRRLDLPSNLPGL
MLTSEHCNRDSQVPRHWMSEDSKHVLIQMLWDNLKLHQDSVQPLYILWNTFNVGYPLTRP
VPEEEKPLSEELLHSVVRSIQRNDVGRPMAQLLQLLANTLGVKRQRSLYRDVLFLSLVAL
GKDNIDIDAFDREYKSAYDRLPPALVKLTHNCDRPPGTGVMECRRTFGEPYL
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaagggcctcgtgtagccgactacttcgtggtggccggtctgacggac
ccgtccaagccgctggaccaggagatccactttgacgacgtctgccacaagtcggccacg
ccgagggcgcccatcaccgacgtggcggtggtgatccgctccatgggcgaggaggtgccc
ccgggcttcacctgcgtggaggaaacgcccggcggccactcggcggacctcaacaacggc
ggcctcatggcgcctcagatcttcctgtgctacaggcgaggccgagacaagccgccgctc
accgacctgggcgtgctgtacgagtggaaggagcgcctcatgcagggctgccagctcatc
cagaccacggcctccggtcggcccgccaacatcagcggcaactcctcccagcgcgtctac
gtcacctaccgccgggcgcccgagagccggccgcactcggcgctggccgtcaccgacgtc
tgcgtcatcatccccagcaagggggagacgcccccccacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctccgtctacctgtgctacaagaagtctgtggcc
aagaccaacatgatcgcctacaaagcaggtttattcagcaggtacccggaggaggactac
gagtccttccctctgcccgagtcggtccccctcttctgcctccccatgggggccaccatg
gagtgctggccccccaccaccaagtactccctccccgtgttctccaccttcgtcctcacc
ggggcctccgcagagaaggtctacggagcggccatccagttctacgagcccttccccgag
gagtgtctgagcgagcagcagcgctcccagctgggtctgctgggccccgacccacagcca
ccctgcaccaccaacaccaccaacaccacctcccccacgcgctccgtgcacaccaacaag
tgcatctgcctgctctcccattggcccttcttcgacgccttccgcaagttcctcacattc
ctgtaccgctactccatctctggcccccacgcgctgcccatcgagaagcacatctgtcat
ttcatgcacaaagttcccttcccttcctctcagaggcctcgcattctggtgcagctctct
cctcacgacagcctgatgctcagccagccggtgtcgtctcctctgccactcagcggcggc
cggttttccatgctgctgcagaacctgggcccggagaacgccgtcaccctgctggtgttc
gccgtcaccgagcacaagatcctggtccactcgctgcggcccgccgtcctgaccagcgtc
accgaggccctggtgtccatgatcttcccgttccactggccctgcccctacattcctctg
tgcccgctggcgttggcagacgtgttgagcgccccctgtcccttcattgttggagtggac
tcccgctactttgacctgtatgaccccccgcctgacgtgagctgcgtggacctggacacc
agcaccatcttccacaatgaagacaagcgagccctcacgtggaagatcctgcccaagaag
gcctgtaagaacctgatgaacgtgctgaaccttctctaccagcagctggtggacggtcag
cagcgctgcgacgggcagctggagctcagcgtgagcgcctcctcggagctgagctgtggg
aagagcctccaggcgctggagctggagatccaggaggccttcctgcgcttcatggcggcc
atcttgaaaggctaccgctccttcctgcggcccatcacccaggcgccctcggagaaggcc
acggacgccagctcgctctttgacctgcaagggttcctgaagagccgcgaccgctcacac
cagaagttctactcgctgatgaccaaaacccagatgttcatccgctttattgaggagtgc
tccttcgtcagcgacaaggacgccagcctggccttcttcgacgactgcgtggacaaactt
tacaactcagagcggagtggagacaaaggaggaaaggcggagggcgagcgagcagaggag
agccgcctgatcgagaccgacgagtcccagcgcagcgagcacaccgtgttcatcacgccc
cccgagctgcccccactccccgagggggcggagcaccctctctgttacaggtacgacggt
ttccccgtgttgagtctggacctgttcgaccccctggagggcctcaggacccccacctcc
cgcctcgccgccaggcacagctgccccacaagccccgcccccatgttcagacgtacgaag
caggagatcaaatcagcccagaagatagccaggaagtactcctccgtaccccagctgtgg
tccaagtgcctcctgcgccactgctacggcctgtggttcatctgcctgccggcctacgtc
caggtctgccactccaaggtgcgggcgctccgcacggcgtacgacgtcctgcggaagatg
caggccaagaagctgcagccccccgacgaggtctgctaccgggtgctgatgcagctgtgt
ggacagtatggacagcccgtcctggcagtgcgggtcctctttgagatgaagaaggccggc
gtgcaccccaacgccatcacctacggctactacaacaaggcagtgttggagagcacgtgg
ccctccagaaccaggggaggctacttcctgtggatgaagctgaggaatgtggttctgggc
gtggctcagttcaagcgggcactacgtcgccatgctccgattacccagaatcctttgtca
gatggcagcgacctggacgccgtgagtcaggccagcttggagatctccgccgacgccccc
ctggcccgggtcgaccccgccgacgacagatccagcacagcggcacgcgggggcggctgc
gtggttcatgcacggcgggggggatgggagcccggaggagcccccccccacccaggggac
caatcggatctgggctacaactctctgtccaaagaggaggtccggcgaggagctccggac
accaagaaggagagcgactgcagctccctgtcggagtcggacagcaccaaggggagcaag
gacctcctcccccagccggacacggagctccactcctccttcagaccccgcggcatcgta
cgcagcagctgtccctacggcgacgcctcctgccaaaccaagggctcctccagcgcagac
cacgtggcgggtctcctcttcacctcctccctggaggagatcggcgaggttcgaacccgc
agcctgctgaggagacacaagagcgctctggaggacgtggtgggcgggggctcggcaggc
ggcggcgtcctgggcctcggcatgagccggggggagaccgacccggacaagatcgcgggg
cacctcggcgccgacgttaagatcctctccgccgccaccttcagcgagaggcctcgctcg
ctggctctgggctgggcggcctgcagggagggggacgaggaggggcgggactccagcgac
gaggacaggggcaacgcggacgccatttttgacctcgaggacctggattcggaaaaaaac
cccacaggggggcggagcagatcgcacacgaaggtggtggagcgcagcgtgaagcgcacg
gatatccgggcgggctacgacccgctgtccctgctggcggcggagtcccggcccgacgag
gacgaggaccggtacccggggggggccgaggtcggcacgccgagcgcccgcgggcacctg
gcccgggagatcgagctctacatgaaccacatgggcagcccgctgagcagccgcacgcca
agcctggacctgcaggactacggcggcccgctgctcctccccccggccccgccgctgccg
ccgccggcgggcccccgcagggccagcctgccccacggctcccccctcagggccgccggg
gtgacgcgctcgcgcaccttccacccgccctcgccctcccggcccgtgccgcgccagcgc
ctgctgtcctcgccgtcctgccgcagctccggcaacaccacgcccagcgccagcccccgg
cccagcccccgcagggaccgggcggaccggggcagcctggcgtcgccatcgtcctcctcc
tcctcctccttcgcgctggagaccctgctcacgccgtcgctcgacgtgttcaaaaccagc
gtgttctcggcggggaagggcgtggcggagaaggcgagccgctggtactcgcgcctgtcc
acgtacaccacgcccaccaaggacgctcacagcgaccgcctcagcgtctcctccctcggg
tttggggatccggaccgctcctccccgctggatgaggaggaccgcgggggctccgtcatc
tctccgcagaggaacggccccccggggccccgcaggaggagcccccgacgcagcgggctg
gacagcccctcatcgctgctccctggatgcgtcctctcgcctcccggctttcctctgacg
gacaagtcggacctcggctcctcccactacaccagcaacaccagcatcttcaacagctac
gccatggagctgctgatctccagctgctctcgctgtaagacgtgcgactgcctggtgtac
gacgaggagatcatggccggctggacggcggacgactccaacctgaacaccacctgtccc
ttctgtgggaaccccttcctgcccttcctcaacgtggagatccgggacctgaggggaccc
ggcaggctcttcctgaagggaagctcgtcggtggaggaggccgtgacctcgtcgtgctcc
gcctccacgggtccggacaccggcgcctccaccctgtccaccccgtgtcccaccacagcc
gtcttccccccgtcccccgagggtccggggagcagacggacccgacccagcagagctcag
ggcatcagcggcccctccccggcccccggggccccgatggctcgcagcatcagcgccttc
ggccctctggacgagccgccacgcctccaccgcggcgtgcccacgtcgggcagcctgccc
agccgcctgaacgacaccacggaccctctgaacatggagtggcggctgcaccaccctgag
ccggtgacggtgccctacctgagcccgctggtgctgtggaaggagctcgagagcctgctg
gagaacgagggcgacccggtgatcacagaggctgacgtggtggaccagcaccccatcatc
tactggaacctggtctggtacttcaggaggctggacctgcccagcaacctgccgggcctc
atgctcacctcagagcactgcaacagggactcacaggtccctcgtcactggatgtctgag
gacagtaagcacgtgctgatccagatgttgtgggacaacctgaagctccaccaggactct
gtccagccgctctacatcctgtggaacaccttcaatgtggggtaccctctgacccggccc
gtccccgaggaggagaagccgctcagcgaggagctgctgcacagcgtggtgaggagcatc
cagaggaacgacgtgggccggccgatggcgcagctgctgcagctgctggcgaacacgctg
ggggtcaaacggcagaggagtctgtaccgagacgtcctcttcctctccctggtggctctg
gggaaagacaacatcgacatcgacgccttcgaccgcgagtacaagtccgcgtacgaccgc
ctgccgccggctctggtgaagctgacccacaactgtgaccgcccccccggcaccggggtc
atggagtgccgcaggacgtttggagagccttacctgtaa
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